Gene

KWMTBOMO01337  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008889

Annotation

Short-chain_dehydrogenase_[Operophtera_brumata]

Location

Bomo_Chr3(+):8214745-8215714      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 0.79

CDS

ATGTATAATGTAACCAGTCTCATTGTTCGTCAGCACTCGCTCGGCGCCGGTACTATGTTCAATAATAAAGTAGTTTTAGTTACGGGAGCCAGTTCGGGAATAGGCGCGTCTTGTGCAATGAAATTTGCCGAATTAAATGCCTCTCTATCACTAATTGGAAGGAACGTTAACAAACTTAATGAAACGGCTAGCAGCTGTGAACAAATCTGCGGTCTAAAACCATTGATTATCGTTGCCGACATTACAAATATAGATGACATCGACAGAATTATCAATAACACATTAAACAAGTATGGAAAGATTGATGTTCTTGTGAACAGCGCTGGAGTATCTTCATTAGCTGGAATACAACCTGACATCGAAGCTTTCGACTACGTAATGGCAAGTAATCTTCGAGGGCCTTATCTTCTTACAACTAAAGTTATACCCCATCTCATTGAAACGAGAGGAAACATTGTGAACATTTCAAGTATGCTCTCATTTAAGCCGTTGCCCGCAATGACCGCTTATTGCATGTCAAAGGCAGCCATCGACATGTTTAGTAAATGCTTGGCTTTGGAGCTTGGACCGAAAGGGGTGCGAGTAAATACTGTGAATCCCGGACCTGTGAGAACACCACTCTTCACAACAAGCGGCATGAAAGAAAGTGATGTGAAAGCAATGTTTCGAATCGTAGAATCAAACGCACCGCTACGTATAGTTACCGAAGCGACTGATGTAGCAAATATTGTGACATTCGTAGCTAGTGAGAGTGCCCGTTGCGTCACTGGGTGTTCATATTTCGTTGATAGCGGACTAAGTTTAGGCGATGCAAAATAA

Protein

MYNVTSLIVRQHSLGAGTMFNNKVVLVTGASSGIGASCAMKFAELNASLSLIGRNVNKLNETASSCEQICGLKPLIIVADITNIDDIDRIINNTLNKYGKIDVLVNSAGVSSLAGIQPDIEAFDYVMASNLRGPYLLTTKVIPHLIETRGNIVNISSMLSFKPLPAMTAYCMSKAAIDMFSKCLALELGPKGVRVNTVNPGPVRTPLFTTSGMKESDVKAMFRIVESNAPLRIVTEATDVANIVTFVASESARCVTGCSYFVDSGLSLGDAK

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JH92   A0A0L7KZH2   A0A2W1BZM6   A0A2H1VC15   A0A194RMJ6   A0A212FH32   + More
A0A194PUH3   A0A194PHJ7   A0A0L7KPN2   D2SNW1   A0A2A4JIX4   I4DPW2   A0A194RRD7   F4WMX4   H9JG62   A0A2A4K5A7   H9JKZ2   A0A2H8TRX4   A0A2A4ITT1   A0A0M9A8J7   J9K4P0   A0A2H1WS78   C4WUE4   A0A0J7KFU3   A0A0L7R3L7   A0A2A4K3W4   A0A2A4JHX2   A0A194QKD5   A0A2H1WLI7   A0A0N1IEC4   A0A2H1WMX1   H9JEZ9   K7IVB6   A0A2H1VFS6   A0A212FE39   A0A2A4JIH1   S4PS88   F4WG14   A0A158NTG0   A0A1Q3FM45   A0A2H1WLM5   A0A2W1BUV9   F4WG13   A0A210R4L6   F4WG15   A0A2A4JH23   J3JT59   B0X121   A0A182V2E6   Q7QCA0   A0A151HYC5   A0A212F7Q6   A0A151IW71   A0A1Q3FQH9   A0A1B6JEH2   D6WBF1   A0A182TTS6   A0A336MBZ2   A0A2A4K3H7   A0A084VXX9   B4M524   A0A182IKA3   H9JUE7   A0A182LEW0   A0A0L0CQ82   Q2F651   A0A2C9GR56   A0A336MQF8   E0VS60   A0A2H1WTS2   A0A182M8T5   A0A0L7K599   A0A158NTG1   A0A1B6GU46   A0A0L7KQD7   A0A182SS86   A0A1I8MT18   A0A0J7L8N8   A0A2H1WFW5   A0A1B6GXM3   A0A2D0PRY4   A0A1B6H0Z8   A0A182VPA1   A0A182TD91   F6WNB8   Q16ZI8   A0A182HAP4   F6T472   A0A182LEW9   Q6DFP0   A0A182Q2B3   E2A5R3   A0A182FRI9   H9JEZ8   J9HY30   W5J801   A0A2A4J134   R4WD84  

Pubmed

19121390    26227816    28756777    26354079    22118469    20074338    + More
22651552    21719571    20075255    23622113    21347285    28812685    22516182    23537049    12364791    14747013    17210077    18362917    19820115    24438588    17994087    20966253    26108605    20566863    25315136    20431018    17510324    26483478    20798317    20920257    23761445    23691247   

EMBL

BABH01012738    JTDY01004127    KOB68555.1    KZ149894    PZC78895.1    ODYU01001753    + More
SOQ38389.1    KQ459989    KPJ18747.1    AGBW02008559    OWR53039.1    KQ459591    KPI96972.1    KQ459604    KPI92523.1    JTDY01007623    KOB65070.1    EZ407245    ACX53802.1    NWSH01001398    PCG71373.1    AK403809    BAM19952.1    KQ459765    KPJ20037.1    GL888223    EGI64444.1    BABH01002061    NWSH01000134    PCG79206.1    BABH01011332    GFXV01005148    MBW16953.1    NWSH01006959    PCG63175.1    KQ435726    KOX78123.1    ABLF02005808    ODYU01010604    SOQ55826.1    AK341030    BAH71514.1    LBMM01007925    KMQ89303.1    KQ414663    KOC65477.1    NWSH01000203    PCG78453.1    PCG71376.1    KQ461198    KPJ06033.1    ODYU01009467    SOQ53929.1    KQ458665    KPJ05623.1    ODYU01009744    SOQ54378.1    BABH01033917    AAZX01013500    ODYU01002131    SOQ39232.1    AGBW02008979    OWR51994.1    PCG71374.1    GAIX01000150    JAA92410.1    GL888128    EGI66781.1    ADTU01025890    GFDL01006355    JAV28690.1    SOQ53928.1    KZ149910    PZC78151.1    EGI66780.1    NEDP02000461    OWF55831.1    EGI66782.1    PCG71375.1    BT126415    KB632402    AEE61379.1    ERL94969.1    DS232250    EDS38413.1    AAAB01008859    EAA07469.4    EGK96869.1    KQ976720    KYM76703.1    AGBW02009838    OWR49774.1    KQ980874    KYN12054.1    GFDL01005273    JAV29772.1    GECU01010179    JAS97527.1    KQ971312    EEZ97890.1    UFQT01000630    SSX25907.1    PCG78454.1    ATLV01018212    KE525224    KFB42823.1    CH940652    EDW59735.1    BABH01022835    JRES01000061    KNC34518.1    DQ311221    ABD36166.1    APCN01000350    UFQS01001990    UFQT01001990    SSX12878.1    SSX32320.1    DS235745    EEB16216.1    ODYU01010994    SOQ56451.1    AXCM01010093    JTDY01010313    KOB58251.1    ADTU01025891    GECZ01003828    JAS65941.1    JTDY01007021    KOB65518.1    LBMM01000191    KMR04536.1    ODYU01008068    SOQ51354.1    GECZ01002593    JAS67176.1    GECZ01031585    GECZ01030749    GECZ01027876    GECZ01019205    GECZ01018616    GECZ01014668    GECZ01012421    GECZ01005108    GECZ01001891    GECZ01001419    GECZ01000022    JAS38184.1    JAS39020.1    JAS41893.1    JAS50564.1    JAS51153.1    JAS55101.1    JAS57348.1    JAS64661.1    JAS67878.1    JAS68350.1    JAS69747.1    AAMC01089549    AAMC01089550    AAMC01089551    CH477489    EAT40086.1    JXUM01081382    JXUM01123063    KQ566675    KQ563243    KXJ69914.1    KXJ74217.1    BC076694    AAH76694.1    AXCN02000007    GL437023    EFN71260.1    CH477221    EJY57385.1    ADMH02002105    ETN58985.1    NWSH01004416    PCG65150.1    AK417468    BAN20683.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000007151    UP000053268    UP000218220    + More
UP000007755    UP000053105    UP000007819    UP000036403    UP000053825    UP000002358    UP000005205    UP000242188    UP000030742    UP000002320    UP000075903    UP000007062    UP000078540    UP000078492    UP000007266    UP000075902    UP000030765    UP000008792    UP000075880    UP000075882    UP000037069    UP000075840    UP000009046    UP000075883    UP000075901    UP000095301    UP000221080    UP000008143    UP000008820    UP000069940    UP000249989    UP000075886    UP000000311    UP000069272    UP000000673   

PRIDE

H9JH92    H9JG62    H9JKZ2    H9JEZ9    H9JUE7    Q2F651    + More
H9JEZ8   

Pfam

PF00106   adh_short

Interpro

IPR002347   SDR_fam        + More
IPR020904   Sc_DH/Rdtase_CS       
IPR036291   NAD(P)-bd_dom_sf       
IPR004210   BESS_motif       
IPR013026   TPR-contain_dom       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       

SUPFAM

SSF51735   SSF51735        + More
SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

H9JH92   A0A0L7KZH2   A0A2W1BZM6   A0A2H1VC15   A0A194RMJ6   A0A212FH32   + More
A0A194PUH3   A0A194PHJ7   A0A0L7KPN2   D2SNW1   A0A2A4JIX4   I4DPW2   A0A194RRD7   F4WMX4   H9JG62   A0A2A4K5A7   H9JKZ2   A0A2H8TRX4   A0A2A4ITT1   A0A0M9A8J7   J9K4P0   A0A2H1WS78   C4WUE4   A0A0J7KFU3   A0A0L7R3L7   A0A2A4K3W4   A0A2A4JHX2   A0A194QKD5   A0A2H1WLI7   A0A0N1IEC4   A0A2H1WMX1   H9JEZ9   K7IVB6   A0A2H1VFS6   A0A212FE39   A0A2A4JIH1   S4PS88   F4WG14   A0A158NTG0   A0A1Q3FM45   A0A2H1WLM5   A0A2W1BUV9   F4WG13   A0A210R4L6   F4WG15   A0A2A4JH23   J3JT59   B0X121   A0A182V2E6   Q7QCA0   A0A151HYC5   A0A212F7Q6   A0A151IW71   A0A1Q3FQH9   A0A1B6JEH2   D6WBF1   A0A182TTS6   A0A336MBZ2   A0A2A4K3H7   A0A084VXX9   B4M524   A0A182IKA3   H9JUE7   A0A182LEW0   A0A0L0CQ82   Q2F651   A0A2C9GR56   A0A336MQF8   E0VS60   A0A2H1WTS2   A0A182M8T5   A0A0L7K599   A0A158NTG1   A0A1B6GU46   A0A0L7KQD7   A0A182SS86   A0A1I8MT18   A0A0J7L8N8   A0A2H1WFW5   A0A1B6GXM3   A0A2D0PRY4   A0A1B6H0Z8   A0A182VPA1   A0A182TD91   F6WNB8   Q16ZI8   A0A182HAP4   F6T472   A0A182LEW9   Q6DFP0   A0A182Q2B3   E2A5R3   A0A182FRI9   H9JEZ8   J9HY30   W5J801   A0A2A4J134   R4WD84  

PDB

1SPX     E-value=6.17675e-29,     Score=315

KEGG

101736548    no KO assigned | (RefSeq) L-xylulose reductase-like

GO

GO:0016491   GO:0005634   GO:0003677   GO:0102131   GO:0102132   GO:0004316   GO:0015035   GO:0045454   GO:0016020   GO:0016820   GO:0016042   GO:0006334   GO:0003779   GO:0016021  

Subcellular location

Nucleus  

Length:

272

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.29385

Exp number, first 60 AAs:

1.24952

Total prob of N-in:

0.11534

outside

1  -  272

 

 

Pi

209.812171

Theta

180.60876

Tajima's D

0.58045

CLR

0.075903

CSRT

0.535723213839308

Interpretation

Uncertain