Gene

KWMTBOMO01334

Pre Gene Modal

BGIBMGA008886

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr3(+):8119575-8120856      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.644 Nuclear   Reliability : 1.975

CDS

ATGAACGAGTACGCCGAATACGATTGGAAACTGCATCAGATGCAAAATGAACGGCTTTGTGAAGTGACTAGAAAACGACTCACAGACGGTGACAGGCAACGGGCGCTTTTGGGCCTAAAAGAGGCGGTGGATTCGAGCCTCAACCTCGCCCTACGAGACAAAAGCCGATGTCAAGATGACAATTTTTTGAGGAGATTTTTATACGCGCGTAAACACGACGTACAACAGAGTTTCGAGCTTTTGGTTCGTTATCATCAATATCGGCGGGAACATGACGAGCTGTGGGCTTCGGCAGACGGGGGCGTGTTACGAGCGCTCGCCGACGGGTTGCCGGGTGTGTTGGCACAACGGGATAGACGCGGGCGCTGTGTGCTCCTCGTGTTCGCCTCGAACTGGTCTCCTCAAGCATGCTCATTAATTTCAGTCTTTAGAGCTCTGCTTCTTACCATTGAACGCACACTGGCGGATATCCAGAACCAAGCCAACGGATACGTAATTATAGTGGATTGGACCGAGTTCACCTTCAAACAATCGTGCAGTTTACAAGCTAAGGTATTGAAAATGATGATTGACTGTTTACAAGATTGTATGCCGGTGCGGTTTAAAAGCATTCACTTCATCGGACAACCTTGGTATGTTGAGACCGCTCTCGCCGTCATAAAACCGTATCTCAAAGCGAAGACACGGGAACGAATAGTTTTACACGGTAACAATTTGTCTACTCTCCATGACGCTTTACCTCTTGATATCTTACCGGCCGAACTTGGAGGCGAAGGTCCGTCATATAATTCAGAGCGTTGGCTCCAAGAGTTCTGTCGAAGTGAAAACATTCCTACGACACTTACAACACCAGTGACAGCTATAACAGTAGAGGACGACCTTCCATCGGCGAAGTTAAACAAAGCCTATATACAAAAGGACAGTGCAAACTTTTCATATCATGCTAATGAGAAAAGTGCTAAATCGGAGTTGCTACGTGATAAAGATTGA

Protein

MNEYAEYDWKLHQMQNERLCEVTRKRLTDGDRQRALLGLKEAVDSSLNLALRDKSRCQDDNFLRRFLYARKHDVQQSFELLVRYHQYRREHDELWASADGGVLRALADGLPGVLAQRDRRGRCVLLVFASNWSPQACSLISVFRALLLTIERTLADIQNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAVIKPYLKAKTRERIVLHGNNLSTLHDALPLDILPAELGGEGPSYNSERWLQEFCRSENIPTTLTTPVTAITVEDDLPSAKLNKAYIQKDSANFSYHANEKSAKSELLRDKD

Uniprot

H9JH89   A0A0S2Z2W2   A0A2H4RMT9   A0A0L7KX15   A0A194RRR7   A0A212FH20   + More
A0A2W1BV20   A0A2A4JWH6   A0A2H1WY05   A0A2H4RMT1   A0A194PU90   A0A1E1VX73   A0A0L7K228   A0A0L7KCU5   B0W1F6   Q7Q407   Q179C5   A0A1S4FBC0   A0A182K1P4   A0A182W721   A0A182QNE3   A0A182RCU3   A0A182NUF1   A0A182Y094   A0A182PPJ9   A0A182ISD1   W5J7M1   A0A2M4AGG1   A0A2M4BR96   A0A1S4GY47   A0A182VLX6   A0A182WU16   A0A182HUM9   A0A084W883   A0A2M3Z8V3   A0A182F4W4   A0A182TYA8   A0A182L1F6   A0A2M4BT51   A0A182LVD7   A0A182GTN5   A0A336M0D5   A0A1J1HVV9   A0A067QU31   A0A2J7RRP1   A0A1W4X6K3   D6WWA6   U4U5T2   J3JTB6   A0A1B0GKB4   V5G438   A0A1I8N7E7   A0A0L0C7T9   E0VDZ0   A0A1I8NMA5   A0A0K8VP68   A0A034WFZ0   A0A1B6DGL7   A0A0A9WH41   T1I6K4   W8BS63   A0A0K8WBI1   A0A1S3K6W6   A0A0V0GAT9   A0A1B6L1L8   A0A1B6JPR9   A0A224XHM5   A0A023F172   A0A1B6GHF2   A0A069DRA2   V3ZRW5   A0A210PSS0   K1R172   J9K902   A0A2H8TF93  

Pubmed

19121390    25684408    29136137    26227816    26354079    22118469    + More
28756777    12364791    17510324    25244985    20920257    23761445    24438588    20966253    26483478    24845553    18362917    19820115    23537049    22516182    25315136    26108605    20566863    25348373    25401762    24495485    25474469    26334808    23254933    28812685    22992520   

EMBL

BABH01012752    KT943540    ALQ33298.1    MG434641    ATY51947.1    JTDY01004767    + More
KOB67787.1    KQ459989    KPJ18751.1    AGBW02008559    OWR53036.1    KZ149894    PZC78898.1    NWSH01000444    PCG76377.1    ODYU01011499    SOQ57264.1    MG434638    ATY51944.1    KQ459591    KPI96976.1    GDQN01011726    JAT79328.1    JTDY01016982    KOB51871.1    JTDY01010101    KOB61158.1    DS231821    EDS45026.1    AAAB01008964    EAA12417.4    CH477355    EAT42794.1    AXCN02000762    ADMH02002111    ETN58870.1    GGFK01006550    MBW39871.1    GGFJ01006362    MBW55503.1    APCN01002467    ATLV01021387    KE525317    KFB46427.1    GGFM01004202    MBW24953.1    GGFJ01006970    MBW56111.1    AXCM01001263    JXUM01087776    KQ563657    KXJ73543.1    UFQS01000375    UFQT01000375    SSX03326.1    SSX23692.1    CVRI01000020    CRK90646.1    KK853016    KDR12483.1    NEVH01000599    PNF43482.1    KQ971361    EFA08160.1    KB631763    ERL85961.1    APGK01035808    APGK01035809    APGK01035810    BT126472    KB740928    AEE61436.1    ENN77977.1    AJWK01028646    GALX01003666    JAB64800.1    JRES01000895    KNC27474.1    DS235088    EEB11596.1    GDHF01011638    JAI40676.1    GAKP01006275    GAKP01006274    JAC52678.1    GEDC01027273    GEDC01012506    JAS10025.1    JAS24792.1    GBHO01037761    JAG05843.1    ACPB03010157    GAMC01002361    GAMC01002360    JAC04196.1    GDHF01003798    JAI48516.1    GECL01000924    JAP05200.1    GEBQ01022370    GEBQ01017654    JAT17607.1    JAT22323.1    GECU01006559    JAT01148.1    GFTR01004441    JAW11985.1    GBBI01003679    JAC15033.1    GECZ01007912    JAS61857.1    GBGD01002489    JAC86400.1    KB203275    ESO85290.1    NEDP02005522    OWF39540.1    JH817017    EKC27481.1    ABLF02032167    GFXV01000968    MBW12773.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000007151    UP000218220    UP000053268    + More
UP000002320    UP000007062    UP000008820    UP000075881    UP000075920    UP000075886    UP000075900    UP000075884    UP000076408    UP000075885    UP000075880    UP000000673    UP000075903    UP000076407    UP000075840    UP000030765    UP000069272    UP000075902    UP000075882    UP000075883    UP000069940    UP000249989    UP000183832    UP000027135    UP000235965    UP000192223    UP000007266    UP000030742    UP000019118    UP000092461    UP000095301    UP000037069    UP000009046    UP000095300    UP000015103    UP000085678    UP000030746    UP000242188    UP000005408    UP000007819   

PRIDE

H9JH89   

Pfam

PF00650   CRAL_TRIO        + More
PF03765   CRAL_TRIO_N

Interpro

IPR011074   CRAL/TRIO_N_dom        + More
IPR001251   CRAL-TRIO_dom       
IPR028634   Clavesin-1       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036865   CRAL-TRIO_dom_sf       
IPR028636   Clavesin-2       

SUPFAM

SSF46938   SSF46938        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JH89   A0A0S2Z2W2   A0A2H4RMT9   A0A0L7KX15   A0A194RRR7   A0A212FH20   + More
A0A2W1BV20   A0A2A4JWH6   A0A2H1WY05   A0A2H4RMT1   A0A194PU90   A0A1E1VX73   A0A0L7K228   A0A0L7KCU5   B0W1F6   Q7Q407   Q179C5   A0A1S4FBC0   A0A182K1P4   A0A182W721   A0A182QNE3   A0A182RCU3   A0A182NUF1   A0A182Y094   A0A182PPJ9   A0A182ISD1   W5J7M1   A0A2M4AGG1   A0A2M4BR96   A0A1S4GY47   A0A182VLX6   A0A182WU16   A0A182HUM9   A0A084W883   A0A2M3Z8V3   A0A182F4W4   A0A182TYA8   A0A182L1F6   A0A2M4BT51   A0A182LVD7   A0A182GTN5   A0A336M0D5   A0A1J1HVV9   A0A067QU31   A0A2J7RRP1   A0A1W4X6K3   D6WWA6   U4U5T2   J3JTB6   A0A1B0GKB4   V5G438   A0A1I8N7E7   A0A0L0C7T9   E0VDZ0   A0A1I8NMA5   A0A0K8VP68   A0A034WFZ0   A0A1B6DGL7   A0A0A9WH41   T1I6K4   W8BS63   A0A0K8WBI1   A0A1S3K6W6   A0A0V0GAT9   A0A1B6L1L8   A0A1B6JPR9   A0A224XHM5   A0A023F172   A0A1B6GHF2   A0A069DRA2   V3ZRW5   A0A210PSS0   K1R172   J9K902   A0A2H8TF93  

PDB

3HY5     E-value=6.73209e-43,     Score=437

KEGG

101736586    no KO assigned | (RefSeq) clavesin-1-like

GO

GO:0005768   GO:0030136   GO:0080025   GO:0007040   GO:0005802   GO:0016787   GO:0005215   GO:0005622   GO:0006810   GO:0016020   GO:0016820   GO:0016042   GO:0005634   GO:0006334   GO:0003779   GO:0016021  

PANTHER

PTHR10174:SF72   PTHR10174:SF73  

Length:

329

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.88856

Exp number, first 60 AAs:

0

Total prob of N-in:

0.18345

outside

1  -  329

 

 

Pi

176.236791

Theta

170.330999

Tajima's D

0.141352

CLR

63.409714

CSRT

0.410079496025199

Interpretation

Uncertain