SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01324
Annotation
PREDICTED:_uncharacterized_protein_LOC105842588_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.703
 

Sequence

CDS
ATGGACGATGACGACGGGGGTGAGGGCTTCAGCTCCGCCCCTGTGTCCGCTCCCATAATAATGGGAAAAAGAAGAATGAAGTCATCTGAATACGACGAAAGCCGCAAAATAAAAATGACTTTCATTAAAAATAAGCGCGGTCTTTTTAAAGACCACCATGCTCTTTACGAAGACCTTACAAAAAAAGAATACCCAGTGCTTCTTCAATCAAGCATCTCACAACCAAATAACAGAGTCCCAATGGACCTGTTAAAAATAAACAAAGCATTAAAAAATATTCAAGGGGTCCAGTATGTCAAAGCTGCTGGGAACTTTTTTGCTAAAATTTACTTTGGCTGTGCTCGGGATGCCAACGCTTTTTTATTAAATGTAAGTTTTATGGAGTTAAACAATTGGACAGCAAAAATACCTTACGATAGCATTGAGAGTCAAGGAATTATTCGAGCTCCTGTGGAATTGAACGAAGAATCTCTTTTAGTAAATTTAAAAGCTTCATGCACAATACTCGGAGTAAAAAGATTTTTCAAAAAACAAGAGAATGGAAGTGACAAGCCACTGCAAACTGTGCTGGTTACATTTTTGGCGTCTAGCCATCCTGATCACGTCACATACGAGCATATTTGGATGCCTGTTTCGGATTATATTAGACCTGTGTTACAGTGCTTCAAATGCTACAAATTCGGACATGGAAGTGGTGCCTGTAAAGCCACTCAAGTTTGCTCTATTTGTTCAGGCAATCATTTTTATAAGGAGTGCAGCACTCCCAACATCTTCAAGTGCTCCAACTGCAGTGGGCCACATTCTGCAGTTTCTTACTCTTGCTCAGTAAAAGCAGCCAAGGTTGCTGAAGTTAAAAATAAGATCATCGGCAAGCAAACATCATATGCAGCCATACTAAAGAATCCTGTAATTAAGAACCCCGTGACCTCTTCTGACATACCTATATCTGCGAAGACCCCTCAAGGTAGGGCTTTAATTTCAGACATTATCAACTCAGAAATTGTCATCAGAACCATTACAAAAACTTTAATAGAATTGTTAAAGAAAAAGGATTCTAAATCCCCTTCTGGACCTATATCTACTCAATTAATTAAAGAAATGCTAGTAACAAATTTTACATCATAA
Protein
MDDDDGGEGFSSAPVSAPIIMGKRRMKSSEYDESRKIKMTFIKNKRGLFKDHHALYEDLTKKEYPVLLQSSISQPNNRVPMDLLKINKALKNIQGVQYVKAAGNFFAKIYFGCARDANAFLLNVSFMELNNWTAKIPYDSIESQGIIRAPVELNEESLLVNLKASCTILGVKRFFKKQENGSDKPLQTVLVTFLASSHPDHVTYEHIWMPVSDYIRPVLQCFKCYKFGHGSGACKATQVCSICSGNHFYKECSTPNIFKCSNCSGPHSAVSYSCSVKAAKVAEVKNKIIGKQTSYAAILKNPVIKNPVTSSDIPISAKTPQGRALISDIINSEIVIRTITKTLIELLKKKDSKSPSGPISTQLIKEMLVTNFTS

Summary

Interpro
IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
SUPFAM
SSF57756   SSF57756       

Ontologies

Topology

Length:
374
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00814999999999999
Exp number, first 60 AAs:
0.00079
Total prob of N-in:
0.00334
outside
1  -  374
 
 

Population Genetic Test Statistics

Pi
589.146617
Theta
235.280768
Tajima's D
4.384848
CLR
0
CSRT
0.999850007499625
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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