Gene

KWMTBOMO01323

Annotation

PREDICTED:_dynein_regulatory_complex_protein_1_[Amyelois_transitella]

Location

Bomo_Chr3(+):7994895-7998013      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.257 Nuclear   Reliability : 1.594

CDS

ATGGCACTGGATATACAAGCGGAGGAAGACATTGAAATCTTATGTAAAACATTTTTAAACTATGCATTCTGTCCTATTTGTGTTGGGCTGGATGTGGAATCTGATTTATTAGAACCATCGCGTGCATCGATGACATCACGCGACGAATCCCATCATGCTAGCGTTAGTGCGAAGTCAACCCGAGGGGATCGAATGTCAGTTCGAGGCAGGCAAAGCGTTGTGAGAAGTATGTCGGTTAGCACCACTAAATCTGGACACATCGGATTTAAGAGCAACGACTTATCACCTGCGGATCAAATTCTGATGGCTGAAGCTGATGAAATTATTCAAAAATGTGGAGATCTTCAAGTTAGCATGTCGTCAGTACCTGGTACCATTTCTGATGGTGGATCTGGTTCTGGGAAAAGACCTGGAGCAAGAGGCGTTACCGTATCCTCACAGGCCAATACAGCGCAAAAATTAGTAAATCCATTTTTGTGTCCGTTTGGACATCCATTGGAAATTGAACCTATGCAAGTTTTAACAGCGTTGGGCGAATTCATTAAAATTTTTGAACCGCCGGAGAAGAAAAAACTATTCAATATTCTAGAATCTGTTAAGCCGCCGGATTTTTCAACACCATCCCGTCAGCTAACTACGGAGGAAATCGAACAGTATTGGACACACTGGAAAAACATATTTCCAGCAGAAAAAGATAGATTTTGGGATGGTTTAATCAGCGCTTTGAATGATTATTTAGCTATTCTACAGGAACGTGAGTGCATCAATGCAGAAGTAGTAGTGCTACGTCGTCGCAATGCGGCATTACGTCGCTTGGTCCGAGGTGCTCTTCCAGAACTTCCCGCTGCAACGCCGCAGTATGCGCGTCAAGGTCCGTCTGTCTTTACCGCTACTTTCACGGATAACGCGCCACAGGCTTTTGAAAAATTACCCCCTATTTAG

Protein

MALDIQAEEDIEILCKTFLNYAFCPICVGLDVESDLLEPSRASMTSRDESHHASVSAKSTRGDRMSVRGRQSVVRSMSVSTTKSGHIGFKSNDLSPADQILMAEADEIIQKCGDLQVSMSSVPGTISDGGSGSGKRPGARGVTVSSQANTAQKLVNPFLCPFGHPLEIEPMQVLTALGEFIKIFEPPEKKKLFNILESVKPPDFSTPSRQLTTEEIEQYWTHWKNIFPAEKDRFWDGLISALNDYLAILQERECINAEVVVLRRRNAALRRLVRGALPELPAATPQYARQGPSVFTATFTDNAPQAFEKLPPI

Uniprot

H9JH85   A0A2W1BB13   A0A2A4JWG6   A0A2H1V4W7   A0A212EQ90   A0A194RLP4   + More
A0A195C5I2   A0A195FQQ7   F4WCD3   A0A195ELQ5   E9ITW6   A0A026WS03   A0A158NRG2   A0A2J7PDE2   A0A067R106   D6WW89   A0A195B692   A0A0N0U790   A0A1W4X557   A0A2A3E9K3   U4TRU7   N6TCB0   E0VDZ2  

Pubmed

19121390    28756777    22118469    26354079    21719571    21282665    + More
24508170    21347285    24845553    18362917    19820115    23537049    20566863   

EMBL

BABH01012762    BABH01012763    BABH01012764    KZ150536    PZC70587.1    NWSH01000444    + More
PCG76367.1    ODYU01000688    SOQ35881.1    AGBW02013301    OWR43634.1    KQ459989    KPJ18758.1    KQ978292    KYM95441.1    KQ981305    KYN42803.1    GL888070    EGI68113.1    KQ978739    KYN28809.1    GL765726    EFZ16002.1    KK107119    EZA58830.1    ADTU01001963    ADTU01001964    NEVH01026389    PNF14348.1    KK853016    KDR12480.1    KQ971361    EFA08677.1    KQ976582    KYM79775.1    KQ435709    KOX80024.1    KZ288312    PBC28405.1    KB630163    KB630856    KB631023    ERL83442.1    ERL83906.1    ERL84013.1    APGK01035752    KB740928    ENN77944.1    DS235088    EEB11598.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000078542    UP000078541    + More
UP000007755    UP000078492    UP000053097    UP000005205    UP000235965    UP000027135    UP000007266    UP000078540    UP000053105    UP000192223    UP000242457    UP000030742    UP000019118    UP000009046   

PRIDE

H9JH85   

Pfam

PF14775   NYD-SP28_assoc        + More
PF04750   Far-17a_AIG1
PF14772   NYD-SP28

Interpro

IPR006838   Far-17a_AIG1        + More
IPR039505   DRC1/2_N       
IPR029440   DRC1_C       
IPR039750   DRC1/DRC2       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JH85   A0A2W1BB13   A0A2A4JWG6   A0A2H1V4W7   A0A212EQ90   A0A194RLP4   + More
A0A195C5I2   A0A195FQQ7   F4WCD3   A0A195ELQ5   E9ITW6   A0A026WS03   A0A158NRG2   A0A2J7PDE2   A0A067R106   D6WW89   A0A195B692   A0A0N0U790   A0A1W4X557   A0A2A3E9K3   U4TRU7   N6TCB0   E0VDZ2  

KEGG

101737654    K19754 dynein regulatry complex protein 1 | (RefSeq) dynein regulatory complex protein 1

GO

GO:0005858   GO:0016021   GO:0070286   GO:0003676   GO:0003352   GO:0060285   GO:0005930  

PANTHER

PTHR21625  

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0671399999999999

Exp number, first 60 AAs:

0.06682

Total prob of N-in:

0.01864

outside

1  -  313

 

 

Pi

165.185816

Theta

164.791511

Tajima's D

-0.3263

CLR

17.715804

CSRT

0.285285735713214

Interpretation

Uncertain