SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01322
Pre Gene Modal
BGIBMGA008882
Annotation
PREDICTED:_dynein_regulatory_complex_protein_1_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.589
 

Sequence

CDS
ATGTCTGACGTTGCTAATGCACTACGTGCGAAAATTCGCAAGGCTGCTGAAGAAGGCGCCATAGAAGAAATTAAAGCAGACGCTGAAATTGTAAAGTTGATGCAGACAATGGACGATTTGGAGAAAAAGTCTGATCAATTCAAGCACGTTAACGATTATAAGTTTTGCCAAATATGGCGTATGGCAACGCATCGTTGCTCAGAATTAAGTAAAGAGCTAAGGCAAGGTGAAGTGGCTTTACATGCTCAGGTTCTAGCCGGACCACCTCCGCCTCCTCCACCGCCATTACCCAAAAGTCCATTAAGCAAATACGAGCAACGAGAATTAGCTAATAAAGATAAATCGAATGAATTAACTGAATCAAAATTAGACGAGACGAAGGATGGCAGATTACAAGCGGCTAAAGAACGATTGGTATGTCATAATTGA
Protein
MSDVANALRAKIRKAAEEGAIEEIKADAEIVKLMQTMDDLEKKSDQFKHVNDYKFCQIWRMATHRCSELSKELRQGEVALHAQVLAGPPPPPPPPLPKSPLSKYEQRELANKDKSNELTESKLDETKDGRLQAAKERLVCHN

Summary

Pfam
PF14775   NYD-SP28_assoc        + More
PF04750   Far-17a_AIG1
PF14772   NYD-SP28
Interpro
IPR006838   Far-17a_AIG1        + More
IPR039505   DRC1/2_N       
IPR029440   DRC1_C       
IPR039750   DRC1/DRC2       

Ontologies

Topology

Length:
142
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.23498
outside
1  -  142
 
 

Population Genetic Test Statistics

Pi
203.202962
Theta
160.264533
Tajima's D
0.829848
CLR
0
CSRT
0.611019449027549
Interpretation
Uncertain
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