Gene

KWMTBOMO01317

Pre Gene Modal

BGIBMGA008880

Annotation

PREDICTED:_actin-related_protein_5_[Amyelois_transitella]

Location

Bomo_Chr3(+):7941395-7951982      View in EpiBrowser

Full name

Actin-related protein 5      

Location in the cell

Cytoplasmic   Reliability : 3.045

CDS

ATGGATGAAGAAAATGTTATAATTTTTAAAGACTATAAAACTGTCCCAGACGTTGTTCACGAATACTCTCCAACACTGAAATTTGAACATATACCTTTGATTATAGACAATGGTTCGTATCAATGTCGTGTAGGCTGGTCTATATCTGAAGAGCCTCATTTAATATTTAAAAACCTTATCGCGAGACCTCGTAAAGATCGGTGCAAAAAAGATGCCGAACCACCTGTAACGCCACCCATTCAAATAGGCAATGACATAATAAATATAGAAGCAGTAAGATTTCAGCTAAAAACTCAGTTCGACAAAAATGTAGTGACACATTTTGAGGTGCAGGAACAAGTTTGTGATTATATTTTCTCACACCTGGGAATAGACAGTGAAGGTGCCGTTAATCATCCCATTGTGATGACAGAAGCTTTTGTCACTCCTAATTATAGCAGGCAATTGATGTCAGAACTTTTATTTGAAGGCTATGGTATTCCTGCTGTAAGTTATGGTGTGGATTCTCTGTTTAGCTTTTATAAGAATGACATTGGTGACACAGCGCTACTTGTAAATTGTGGATATCATACCATACATATAATCCCTGTTATAAAAGGAAAAGTTATTGCAGAACACGCTAGGAGAATAAACTTAGGTGGCAGTGAAATGATATTCTACTTACACAAACTACTCCAATTAAAATATCCCGTTCATGTGAACGCTATTACAATGTCTCGAGCGGAAGAGATTCTTCAAGAGCATTGTTCGGTGGCTCTTGATTACAAGGAGGAGATCACGAAATGGGCAAATGCTGATTACTACGATGCCAATGTGAAGAAGCTTCAATTGCCTGTTATACAAAGCTCAAGTAGTTCTTCTACTTTGACCGCGGAGCAACAAAAGGAAAGAAAGAAAGAGATGGCCAAACGGCTCTTAGAAATTAACGCAAGAAAAAGAGAAGAGAGACTTGCAGAGGATGAAGAACAGTTAAACCAACTGCTGGCATTACATGAAATTATGGAAGACGGAGACACGGATGAATTTGACGAAGCCATCCGTGATTTAGATATCAAAAGCTTTGAAGATCTCCAGAGACAAATATCGAACAAACAAATGCGTATAGAGAAGAATAAACAGCGCATCGCGGCCGCTGCCAACGCCGAGGAGAGCGTGGACGCGCGCCCGCCGCCCGGCAGGTTCCAGCCGCCCACGGACCCCGACGCCTTCCAGATATGGCTCAACGACACGCGAACCAAGTACCGCGAGCTGATGGCGCGGCGCGAGGCCCGGAGGGCGCGGCGCGCGGCCATGGTGCGGCGGCGCACGGCGGCCGCGGCCGAGCGCATGCGCGTCATTTCCCGCCTCGCCGCCGCCGGGGACGACTTCGGCAACCACGACTCCGACTGGGACGCCTACAAGAGCATCAGTCGTGAAGCGGATTCCGATTCCGAAGCGGACGGCGAGCGCCTTGTGGAGTTGGAAGAAGTTCTCCGCGAATACGAGCCTATACCGGCCAAGCATCGCGAGAGACAACTACACCTAGCTATCGAACCTTTCAGAGTCCCTGAACTGATGTTCCAACCATCAATGTTGGGTAACTTGGAGGCCGGTCTTGCAGAAACGATGGAATATCTCTTCAAGCATTTTACTCCCGAAGAACAATTGCTATTAGCCAATAACGTATTTATCACTGGCGGAAGCTCGCAGTTTCCGGGCCTGAAAGAAAGATTAGAACGGGAACTACTTGAAATGAGACCATTTAAGTCAACTCACAAAGTGGTGATGGCGAAAAATCCAAGTCTCGACGCTTGGTACGGAGCTAGAGATTTCGCGAGCAGCAACGCCTTCGAGAATTTTTGCATTACTAAAGAGGATTACTTGGAAATGGGCGGAGAGTACTTGAAGGAGCATTACGCGAGTAATCCGTATTTCAAAAGTCCAGCACCGATTGTGGACACCACGCTGGTGCCCGCGGGTGACTCTAATGTAATAAAAGAGGAGGTCATAGTCGACTGTTGA

Protein

MDEENVIIFKDYKTVPDVVHEYSPTLKFEHIPLIIDNGSYQCRVGWSISEEPHLIFKNLIARPRKDRCKKDAEPPVTPPIQIGNDIINIEAVRFQLKTQFDKNVVTHFEVQEQVCDYIFSHLGIDSEGAVNHPIVMTEAFVTPNYSRQLMSELLFEGYGIPAVSYGVDSLFSFYKNDIGDTALLVNCGYHTIHIIPVIKGKVIAEHARRINLGGSEMIFYLHKLLQLKYPVHVNAITMSRAEEILQEHCSVALDYKEEITKWANADYYDANVKKLQLPVIQSSSSSSTLTAEQQKERKKEMAKRLLEINARKREERLAEDEEQLNQLLALHEIMEDGDTDEFDEAIRDLDIKSFEDLQRQISNKQMRIEKNKQRIAAAANAEESVDARPPPGRFQPPTDPDAFQIWLNDTRTKYRELMARREARRARRAAMVRRRTAAAAERMRVISRLAAAGDDFGNHDSDWDAYKSISREADSDSEADGERLVELEEVLREYEPIPAKHRERQLHLAIEPFRVPELMFQPSMLGNLEAGLAETMEYLFKHFTPEEQLLLANNVFITGGSSQFPGLKERLERELLEMRPFKSTHKVVMAKNPSLDAWYGARDFASSNAFENFCITKEDYLEMGGEYLKEHYASNPYFKSPAPIVDTTLVPAGDSNVIKEEVIVDC

Description

Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.

Subunit

Component of the chromatin remodeling Ino80 complex.

Similarity

Belongs to the actin family.
Belongs to the actin family. ARP5 subfamily.

Keywords

Coiled coil   Complete proteome   DNA damage   DNA recombination   DNA repair   Nucleus   Reference proteome   Transcription   Transcription regulation   Phosphoprotein  

Feature

chain  Actin-related protein 5

Uniprot

A0A194PVG9   A0A194RML0   A0A212EQ57   H9JH83   A0A158NJT8   F4WCD0   + More
A0A195FR95   A0A151XK28   A0A3L8DEF4   A0A026WS93   A0A195C493   A0A195B680   A0A195EKY8   A0A088A6Q1   A0A2A3EAT1   A0A0L7R7H4   A0A0M9ABY5   A0A0C9PV17   A0A154PB59   E2BG39   A0A232FBD8   E9ITW3   A0A067QHV4   A0A0C9R448   A0A0L7QQ77   A0A0J7NRF1   A0A2J7Q9B3   A0A1B0GLC5   A0A336LQF9   A0A336L8Y8   A0A1J1ICX4   A0A310SAR8   A0A139WFP8   A0A1B6L6D3   A0A2J7Q9A0   A0A1B6FYI0   U4UQ10   A0A1Y1L6G9   A0A0A9XBF2   A0A1W4XLG6   B0W7B3   E0VN98   A0A023F2X9   A0A2H8TTK2   J9JW77   A0A1S3DSA1   A0A2S2PSL4   A0A3Q0IYZ4   A0A1Y9GKP5   A0A182TCP4   Q7QA11   A0A182W3F3   A0A182TSS0   Q17GZ9   A0A182UT82   T1HYL9   A0A182H4K7   A0A2K7P692   A0A182NGE8   A0A182GQW9   A0A182LW28   W5J5N1   A0A2M4BH69   A0A182JXK8   A0A182FSS5   A0A182Y8T1   A0A182PP84   V4CQ04   A0A084WA10   A0A0A1XKZ6   A0A182RZK5   W8CDC3   T1J7A5   A0A034WL76   A0A0K8UWK5   A0A1B0D501   A0A162Q701   E9GAV4   A0A0P6BS59   A0A0P6H6M1   A0A2M4CPL5   A0A0L8H1G3   B3M2U5   B4LZ83   A0A1W4UJG0   A0A0N8BJK7   B4KCC9   B4MKL8   A0A1S3HSI9   B3P0D1   B4IB98   B4JUS4   A0A0P5KS44   A0A1S3KGZ3   A0A0B4KG83   Q9VEC3   B4PL74  

Pubmed

26354079    22118469    19121390    21347285    21719571    30249741    + More
24508170    20798317    28648823    21282665    24845553    18362917    19820115    23537049    28004739    25401762    26823975    20566863    25474469    12364791    14747013    17210077    17510324    26483478    20920257    23761445    25244985    23254933    24438588    25830018    24495485    25348373    21292972    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    12537569    16618800    18327897    17550304   

EMBL

KQ459591    KPI96988.1    KQ459989    KPJ18762.1    AGBW02013301    OWR43630.1    + More
BABH01012765    BABH01012766    BABH01012767    ADTU01001966    GL888070    EGI68110.1    KQ981305    KYN42807.1    KQ982052    KYQ60655.1    QOIP01000009    RLU18666.1    KK107119    EZA58833.1    KQ978292    KYM95440.1    KQ976582    KYM79772.1    KQ978739    KYN28806.1    KZ288312    PBC28402.1    KQ414639    KOC66832.1    KQ435709    KOX80019.1    GBYB01005248    JAG75015.1    KQ434867    KZC09149.1    GL448115    EFN85307.1    NNAY01000508    OXU27942.1    GL765726    EFZ15993.1    KK853598    KDR06418.1    GBYB01007587    JAG77354.1    KQ414796    KOC60709.1    LBMM01002280    KMQ95030.1    NEVH01016943    PNF25162.1    AJWK01034746    UFQT01000056    SSX19111.1    UFQS01002082    UFQT01002082    SSX13163.1    SSX32602.1    CVRI01000047    CRK97602.1    KQ776753    OAD52191.1    KQ971352    KYB26627.1    GEBQ01020757    JAT19220.1    PNF25165.1    GECZ01014523    JAS55246.1    KB632410    ERL95187.1    GEZM01065624    JAV68401.1    GBHO01025560    GBHO01025558    GBHO01025557    GBHO01016962    GDHC01021370    GDHC01019187    GDHC01018981    GDHC01004316    JAG18044.1    JAG18046.1    JAG18047.1    JAG26642.1    JAP97258.1    JAP99441.1    JAP99647.1    JAQ14313.1    DS231853    EDS37828.1    DS235335    EEB14854.1    GBBI01003251    JAC15461.1    GFXV01005769    MBW17574.1    ABLF02014202    GGMR01019217    MBY31836.1    APCN01005391    AAAB01008898    EAA09133.5    CH477254    EAT45925.1    ACPB03028563    JXUM01025491    KQ560724    KXJ81130.1    JXUM01081563    JXUM01081564    KQ563255    KXJ74188.1    AXCM01001884    ADMH02002125    ETN58703.1    GGFJ01003241    MBW52382.1    KB199728    ESP04525.1    ATLV01021997    KE525327    KFB47054.1    GBXI01002268    JAD12024.1    GAMC01002196    JAC04360.1    JH431916    GAKP01003845    JAC55107.1    GDHF01021250    JAI31064.1    AJVK01025010    AJVK01025011    LRGB01000389    KZS19407.1    GL732537    EFX83324.1    GDIP01010424    JAM93291.1    GDIQ01036470    JAN58267.1    GGFL01003079    MBW67257.1    KQ419601    KOF82959.1    CH902617    EDV43475.1    CH940650    EDW67090.1    GDIQ01171403    JAK80322.1    CH933806    EDW13738.1    CH963847    EDW72724.1    CH954181    EDV48646.1    CH480827    EDW44656.1    CH916374    EDV91244.1    GDIQ01205840    JAK45885.1    AE014297    AGB96077.1    AY069531    AAF55504.1    AAL39676.1    CM000160    EDW95856.2   

Proteomes

UP000053268    UP000053240    UP000007151    UP000005204    UP000005205    UP000007755    + More
UP000078541    UP000075809    UP000279307    UP000053097    UP000078542    UP000078540    UP000078492    UP000005203    UP000242457    UP000053825    UP000053105    UP000076502    UP000008237    UP000215335    UP000027135    UP000036403    UP000235965    UP000092461    UP000183832    UP000007266    UP000030742    UP000192223    UP000002320    UP000009046    UP000007819    UP000079169    UP000075840    UP000075901    UP000007062    UP000075920    UP000075902    UP000008820    UP000075903    UP000015103    UP000069940    UP000249989    UP000075884    UP000075883    UP000000673    UP000075881    UP000069272    UP000076408    UP000075885    UP000030746    UP000030765    UP000075900    UP000092462    UP000076858    UP000000305    UP000053454    UP000007801    UP000008792    UP000192221    UP000009192    UP000007798    UP000085678    UP000008711    UP000001292    UP000001070    UP000000803    UP000002282   

PRIDE

H9JH83    Q17GZ9    Q9VEC3   

Pfam

PF00022   Actin        + More
PF00076   RRM_1
PF02902   Peptidase_C48
PF01585   G-patch
PF00887   ACBP

Interpro

IPR027664   Arp5        + More
IPR004000   Actin       
IPR006529   U2AF_lg       
IPR038765   Papain-like_cys_pep_sf       
IPR000504   RRM_dom       
IPR012677   Nucleotide-bd_a/b_plait_sf       
IPR003653   Peptidase_C48_C       
IPR035979   RBD_domain_sf       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR000467   G_patch_dom       
IPR035984   Acyl-CoA-binding_sf       
IPR000582   Acyl-CoA-binding_protein       
IPR022408   Acyl-CoA-binding_prot_CS       

SUPFAM

SSF54928   SSF54928        + More
SSF54001   SSF54001       
SSF47027   SSF47027       

Gene 3D

3.30.70.330     1.20.80.10    

ProteinModelPortal

A0A194PVG9   A0A194RML0   A0A212EQ57   H9JH83   A0A158NJT8   F4WCD0   + More
A0A195FR95   A0A151XK28   A0A3L8DEF4   A0A026WS93   A0A195C493   A0A195B680   A0A195EKY8   A0A088A6Q1   A0A2A3EAT1   A0A0L7R7H4   A0A0M9ABY5   A0A0C9PV17   A0A154PB59   E2BG39   A0A232FBD8   E9ITW3   A0A067QHV4   A0A0C9R448   A0A0L7QQ77   A0A0J7NRF1   A0A2J7Q9B3   A0A1B0GLC5   A0A336LQF9   A0A336L8Y8   A0A1J1ICX4   A0A310SAR8   A0A139WFP8   A0A1B6L6D3   A0A2J7Q9A0   A0A1B6FYI0   U4UQ10   A0A1Y1L6G9   A0A0A9XBF2   A0A1W4XLG6   B0W7B3   E0VN98   A0A023F2X9   A0A2H8TTK2   J9JW77   A0A1S3DSA1   A0A2S2PSL4   A0A3Q0IYZ4   A0A1Y9GKP5   A0A182TCP4   Q7QA11   A0A182W3F3   A0A182TSS0   Q17GZ9   A0A182UT82   T1HYL9   A0A182H4K7   A0A2K7P692   A0A182NGE8   A0A182GQW9   A0A182LW28   W5J5N1   A0A2M4BH69   A0A182JXK8   A0A182FSS5   A0A182Y8T1   A0A182PP84   V4CQ04   A0A084WA10   A0A0A1XKZ6   A0A182RZK5   W8CDC3   T1J7A5   A0A034WL76   A0A0K8UWK5   A0A1B0D501   A0A162Q701   E9GAV4   A0A0P6BS59   A0A0P6H6M1   A0A2M4CPL5   A0A0L8H1G3   B3M2U5   B4LZ83   A0A1W4UJG0   A0A0N8BJK7   B4KCC9   B4MKL8   A0A1S3HSI9   B3P0D1   B4IB98   B4JUS4   A0A0P5KS44   A0A1S3KGZ3   A0A0B4KG83   Q9VEC3   B4PL74  

PDB

6HTS     E-value=2.56769e-83,     Score=789

KEGG

101737226    K11672 actin-related protein 5 | (RefSeq) actin-related protein 5

GO

GO:0003723   GO:0006397   GO:0008234   GO:0005634   GO:0043044   GO:0006302   GO:0005737   GO:0006355   GO:0031011   GO:0032508   GO:0006310   GO:0006351   GO:0006281   GO:0006338   GO:0000062   GO:0003676  

PANTHER

PTHR11937   PTHR11937:SF16  

Subcellular location

Nucleus  

Length:

666

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01904

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00104

outside

1  -  666

 

 

Pi

298.233316

Theta

182.207731

Tajima's D

1.808329

CLR

0.422665

CSRT

0.844857757112144

Interpretation

Uncertain