Gene

KWMTBOMO01313

Pre Gene Modal

BGIBMGA008878

Annotation

Cmc1_protein_[Bombyx_mori]

Location

Bomo_Chr3(+):7918815-7919334      View in EpiBrowser

Full name

COX assembly mitochondrial protein      

Location in the cell

Nuclear   Reliability : 2.146

CDS

ATGGCGGCAGAAAAATCTGTGTTACCGCCAACTTTTTCGGCTGGTCCAAAAGGCCTAGGCGATCCTGATGATAGAAGTCTCAGAAAAGTTGAAATAGATGTTATGATACCAAAACTTATCAGAGAAAAGGCTAAACAAGAAAAATGCATTGAAGAAGTAGCTCAATTTGAAAAATGTTGCAAAGATGCTTCATTATTAATGGTGGTTAAATGCAGATCACCCAATGCAGCTTTAAAGGATTGTCTATCAAATTGGTACAATAATGAAGAATTCAAAAAGATATGCACTGAGGAATATTTGAAAGAAAGAAGTGAATATAGAAGAACAGGAGTTAAGAAAGCTATAAGAAGAGCATAA

Protein

MAAEKSVLPPTFSAGPKGLGDPDDRSLRKVEIDVMIPKLIREKAKQEKCIEEVAQFEKCCKDASLLMVVKCRSPNAALKDCLSNWYNNEEFKKICTEEYLKERSEYRRTGVKKAIRRA

Similarity

Belongs to the CMC family.

Uniprot

H9JH81   B9VTR8   A0A2W1BE62   A0A2H1VXG6   A0A194RN58   A0A0L7L3J6   + More
A0A194PUA4   A0A1E1WTM3   A0A212EQ81   S4PGR9   A0A1J1I1S4   T1JIQ4   A0A1W4WVS5   A0A026X4T3   D6WVU5   A0A151J228   F4WSS5   A0A195FMZ8   A0A1B0ETV2   A0A158NH07   A0A0N7ZA27   A0A195B7D0   J3JVN5   A0A2R7VW26   A0A182W9P6   A0A182YGU8   A0A067RVZ1   A0A1Q3FI55   T1E8Z3   Q0IF43   A0A2P6K7P9   B0W5P3   A0A0L7QLA0   W5JBM4   E9IJN9   A0A182RBM4   A0A1B0D8E1   A0A2M3ZD79   A0A2M3ZD92   A0A182UVB5   A0A151XD99   A0A182TT44   A0A182L236   A7UUS2   A0A084VP38   E2AS01   A0A2M4C3M1   A0A0A9X4S7   A0A1L8E104   A0A023EE83   A0A2M4AUD9   A0A1B6EG66   A0A1Y1LIV5   W8C2G4   A0A023G6S9   A0A226E4I3   G3MQJ4   A0A1I8MEK6   A0A2A3EB33   V9IHT4   A0A0L0CGB8   A0A087ZR60   A0A232FKC8   A0A182MS67   A0A0M9ABX9   A0A1L8EA39   A0A1L8EC96   A0A0K8VIA2   K7J0M8   A0A224YVS8   A0A131Z3Q7   A0A1D2MQQ0   A0A293MUF7   A0A0C9R0Q9   B4KG58   B4MVR5   L7LXD2   A0A131XCC5   A0A2J7Q993   A0A1A9ZD05   A0A023FYH5   A0A034W873   Q29MT5   B4G8R7   A0A087ZFP2   A0A1B0G9B8   A0A023F216   A0A0M4EPV1   A0A1W4VX14   A0A336L7H0   A0A336MRM7   A0A154PSH8   A0A310S4Y8   A0A1A9XCT2   A0A1B0AUT1   A0A1A9UL41   B4P9B0   Q9VJJ1   B3NNJ7   B4LSR8  

Pubmed

19121390    28756777    26354079    26227816    22118469    23622113    + More
24508170    30249741    18362917    19820115    21719571    21347285    22516182    23537049    25244985    24845553    17510324    20920257    21282665    20966253    12364791    14747013    17210077    24438588    20798317    25401762    26823975    24945155    28004739    24495485    22216098    25315136    26108605    28648823    20075255    28797301    26830274    27289101    17994087    25576852    28049606    25348373    15632085    25474469    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

BABH01012768    FJ602778    ACM24344.1    KZ150370    PZC71150.1    ODYU01005035    + More
SOQ45525.1    KQ459989    KPJ18765.1    JTDY01003163    KOB70032.1    KQ459591    KPI96991.1    GDQN01000689    JAT90365.1    AGBW02013301    OWR43627.1    GAIX01006090    JAA86470.1    CVRI01000038    CRK94237.1    JH431265    JH432074    KK107020    QOIP01000004    EZA62434.1    RLU23783.1    KQ971358    EFA08617.1    KQ980447    KYN16000.1    GL888327    EGI62732.1    KQ981387    KYN41980.1    AJWK01011431    ADTU01015424    GDRN01105752    JAI57680.1    KQ976574    KYM80104.1    APGK01036017    BT127303    KB740932    AEE62265.1    ENN77810.1    KK854121    PTY11662.1    KK852428    KDR24039.1    GFDL01007821    JAV27224.1    GAMD01002323    JAA99267.1    CH477394    EAT41896.1    MWRG01021805    PRD22337.1    DS231844    EDS35696.1    KQ414924    KOC59397.1    ADMH02001962    ETN60164.1    GL763877    EFZ19211.1    AJVK01027374    GGFM01005745    MBW26496.1    GGFM01005720    MBW26471.1    KQ982294    KYQ58335.1    AAAB01008964    EDO63607.1    ATLV01014974    KE524999    KFB39732.1    GL442209    EFN63775.1    GGFJ01010743    MBW59884.1    GBHO01028978    GBRD01008128    GDHC01021883    GDHC01017956    JAG14626.1    JAG57693.1    JAP96745.1    JAQ00673.1    GFDF01001703    JAV12381.1    GAPW01005941    JAC07657.1    GGFK01011085    MBW44406.1    GEDC01000417    JAS36881.1    GEZM01054531    GEZM01054530    GEZM01054529    JAV73579.1    GAMC01006559    GAMC01006557    JAB99996.1    GBBM01005884    JAC29534.1    LNIX01000007    OXA52188.1    JO844145    AEO35762.1    KZ288312    PBC28396.1    JR044593    AEY59894.1    JRES01000438    KNC31262.1    NNAY01000105    OXU30918.1    AXCM01001013    KQ435709    KOX80009.1    GFDG01003323    JAV15476.1    GFDG01002636    JAV16163.1    GDHF01014064    JAI38250.1    GFPF01006928    MAA18074.1    GEDV01003471    JAP85086.1    LJIJ01000700    ODM95191.1    GFWV01019418    MAA44146.1    GBYB01000446    JAG70213.1    CH933807    EDW13197.1    CH963857    EDW75785.1    GACK01008308    JAA56726.1    GEFH01004841    JAP63740.1    NEVH01016943    PNF25150.1    GBBL01000758    JAC26562.1    GAKP01008440    JAC50512.1    CH379060    EAL33608.1    CH479180    EDW28747.1    CCAG010018508    GBBI01003105    JAC15607.1    CP012523    ALC38937.1    UFQS01001810    UFQT01001810    SSX12415.1    SSX31866.1    UFQS01001772    UFQT01001772    SSX12298.1    SSX31749.1    KQ435134    KZC14875.1    KQ773121    OAD52424.1    JXJN01003724    CM000158    EDW90239.1    AE014134    AAF53557.1    CH954179    EDV56648.1    CH940649    EDW63807.1   

Proteomes

UP000005204    UP000053240    UP000037510    UP000053268    UP000007151    UP000183832    + More
UP000192223    UP000053097    UP000279307    UP000007266    UP000078492    UP000007755    UP000078541    UP000092461    UP000005205    UP000078540    UP000019118    UP000075920    UP000076408    UP000027135    UP000008820    UP000002320    UP000053825    UP000000673    UP000075900    UP000092462    UP000075903    UP000075809    UP000075902    UP000075882    UP000007062    UP000030765    UP000000311    UP000198287    UP000095301    UP000242457    UP000037069    UP000005203    UP000215335    UP000075883    UP000053105    UP000002358    UP000094527    UP000009192    UP000007798    UP000235965    UP000092445    UP000001819    UP000008744    UP000092444    UP000092553    UP000192221    UP000076502    UP000092443    UP000092460    UP000078200    UP000002282    UP000000803    UP000008711    UP000008792   

PRIDE

H9JH81    B9VTR8    Q9VJJ1   

Pfam

PF08583   Cmc1        + More
PF02931   Neur_chan_LBD
PF12348   CLASP_N

Interpro

IPR013892   Cyt_c_biogenesis_Cmc1-like        + More
IPR006201   Neur_channel       
IPR006202   Neur_chan_lig-bd       
IPR036734   Neur_chan_lig-bd_sf       
IPR024395   CLASP_N_dom       
IPR016024   ARM-type_fold       
IPR034085   TOG       
IPR011989   ARM-like       

SUPFAM

SSF63712   SSF63712        + More
SSF48371   SSF48371       

Gene 3D

2.70.170.10     1.25.10.10    

ProteinModelPortal

H9JH81   B9VTR8   A0A2W1BE62   A0A2H1VXG6   A0A194RN58   A0A0L7L3J6   + More
A0A194PUA4   A0A1E1WTM3   A0A212EQ81   S4PGR9   A0A1J1I1S4   T1JIQ4   A0A1W4WVS5   A0A026X4T3   D6WVU5   A0A151J228   F4WSS5   A0A195FMZ8   A0A1B0ETV2   A0A158NH07   A0A0N7ZA27   A0A195B7D0   J3JVN5   A0A2R7VW26   A0A182W9P6   A0A182YGU8   A0A067RVZ1   A0A1Q3FI55   T1E8Z3   Q0IF43   A0A2P6K7P9   B0W5P3   A0A0L7QLA0   W5JBM4   E9IJN9   A0A182RBM4   A0A1B0D8E1   A0A2M3ZD79   A0A2M3ZD92   A0A182UVB5   A0A151XD99   A0A182TT44   A0A182L236   A7UUS2   A0A084VP38   E2AS01   A0A2M4C3M1   A0A0A9X4S7   A0A1L8E104   A0A023EE83   A0A2M4AUD9   A0A1B6EG66   A0A1Y1LIV5   W8C2G4   A0A023G6S9   A0A226E4I3   G3MQJ4   A0A1I8MEK6   A0A2A3EB33   V9IHT4   A0A0L0CGB8   A0A087ZR60   A0A232FKC8   A0A182MS67   A0A0M9ABX9   A0A1L8EA39   A0A1L8EC96   A0A0K8VIA2   K7J0M8   A0A224YVS8   A0A131Z3Q7   A0A1D2MQQ0   A0A293MUF7   A0A0C9R0Q9   B4KG58   B4MVR5   L7LXD2   A0A131XCC5   A0A2J7Q993   A0A1A9ZD05   A0A023FYH5   A0A034W873   Q29MT5   B4G8R7   A0A087ZFP2   A0A1B0G9B8   A0A023F216   A0A0M4EPV1   A0A1W4VX14   A0A336L7H0   A0A336MRM7   A0A154PSH8   A0A310S4Y8   A0A1A9XCT2   A0A1B0AUT1   A0A1A9UL41   B4P9B0   Q9VJJ1   B3NNJ7   B4LSR8  

KEGG

100286768    K18171 COX assembly mitochondrial protein 1 | (RefSeq) Cmc1; Cmc1 protein

GO

GO:0005739   GO:0005230   GO:0004888   GO:0016021   GO:0005507   GO:0033617   GO:0005758  

PANTHER

PTHR22977   PTHR18945  

Subcellular location

Mitochondrion  

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.13400

outside

1  -  118

 

 

Pi

248.109792

Theta

155.660987

Tajima's D

1.867341

CLR

0

CSRT

0.857307134643268

Interpretation

Uncertain