Gene

KWMTBOMO01304  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009012

Annotation

cytochrome_c_[Bombyx_mori]

Location

Bomo_Chr3(-):7695752-7697904      View in EpiBrowser

Full name

Cytochrome c       + More
Cytochrome c-2      

Alternative Name

Cytochrome c-proximal

Location in the cell

Mitochondrial   Reliability : 3.793

CDS

ATGGGTGTACCTGCAGGAAACGCTGAAAATGGAAAGAAAATTTTTGTACAACGATGTGCCCAGTGCCACACTGTTGAAGCTGGTGGCAAACACAAAGTAGGACCGAATCTACATGGATTCTTTGGCCGAAAAACTGGCCAGGCTGCAGGATTCTCATACTCCGATGCCAATAAAGCTAAGGGCATTACATGGAATGACGACACTCTCTTTGAATATCTTGAGAATCCCAAGAAATACATCCCTGGAACCAAGATGGTATTTGCTGGACTCAAGAAGGCAAATGAGCGTGCTGACCTTATTGCCTATCTCAAATCTGCTACCAAGTAA

Protein

MGVPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITWNDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKSATK

Description

Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.

Miscellaneous

There are two cytochrome C genes in Drosophila: Cyt-c-d (distal) and Cyt-c-p (proximal).

Similarity

Belongs to the cytochrome c family.

Keywords

Direct protein sequencing   Electron transport   Heme   Iron   Metal-binding   Mitochondrion   Respiratory chain   Transport   3D-structure   Complete proteome   Reference proteome  

Feature

chain  Cytochrome c

Uniprot

H9JHL4   B5AFH2   S4PFX0   A0A212FHK7   A0A023HN92   P00037   + More
A0A1E1WBD4   P00039   A0A194RD50   A0A194PUJ9   A0A2H1VC35   I4DMY7   J9XNY4   A0A0A7BZ22   A0A0K8V7Y8   A0A034WSY6   A0A0C9QHE0   A0A182Q5W5   A0A182UEJ7   A0A0A1WEW8   A0A1I8N8V4   A0A1L8EGQ8   A0A1I8PA92   A0A1L8EFJ2   A0A2W1BRS8   A0A2A4J518   A0A182Y5R9   A0A182MW21   A0A182V5I4   A0A182NE79   A0A182JYE7   A0A182VV18   A0A182L5Q7   Q7PSA9   W8B1Y3   D3TN30   A0A182RGH3   A0A182IU63   J9PXA8   A0A0L0CG59   A0A1L8EHW6   P12831   P00035   A0A023EEY5   T1GBF5   T1DN44   A0A2M3YZB0   A0A2M4A3X4   W5J4W4   A0A182F4E1   A0A0L7KVI2   A0A1B0AUU2   A0A182P953   A0A1W4VWL4   A0A3B0JN44   Q29MT2   B4P9B4   B3MU97   B4I534   B3NNJ3   B4Q7E9   X2J6D4   P84029   P84030   Q1HRI9   B4MVR8   A0A1L8EHT1   P00036   A0A0M4E497   A0A1Q3FJF9   B0XHT8   J3JW09   B4LSR5   B4JEH6   A0A0K8TQD8   A0A1B0GN46   U5EWT7   T1PF88   A0A182N4T5   B4KG55   A0A1I8Q8P7   A0A1L8EFA6   A0A182QUW1   D6WVZ4   M1PFE4   V5H2S9   A0A1L8E0Q4   A0A1J1IMI1   A0A232EMU0   A0A226EM57   A0A151WUW2   A0A195BBZ7   A0A158NMU9   E2A6T0   A0A151JBR5   A0A336M3A4   A0A195C685   A0A1D1Y4U9   A0A336M714   K7IXL7  

Pubmed

19121390    23622113    22118469    5903726    2984675    5499433    + More
26354079    22651552    25348373    25830018    25315136    28756777    25244985    20966253    12364791    14747013    17210077    24495485    20353571    26108605    3029051    24945155    26483478    20920257    23761445    26227816    15632085    17994087    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    2987802    167835    17204158    17510324    202328    22516182    23537049    26369729    18362917    19820115    23390104    28648823    21347285    20798317    20075255   

EMBL

BABH01012798    EU839987    ACF41193.1    GAIX01003857    JAA88703.1    AGBW02008499    + More
OWR53222.1    KC507801    AGN75105.1    GDQN01006873    JAT84181.1    M11382    KQ460597    KPJ13836.1    KQ459591    KPI96997.1    ODYU01001762    SOQ38410.1    AK402655    BAM19277.1    JX313131    AFS31125.1    KC966940    AHV85214.1    GDHF01017624    JAI34690.1    GAKP01002059    JAC56893.1    GBYB01002934    JAG72701.1    AXCN02000868    GBXI01017334    GBXI01001895    JAC96957.1    JAD12397.1    GFDG01000892    JAV17907.1    GFDG01001299    JAV17500.1    KZ150048    PZC74463.1    NWSH01002950    PCG67237.1    AXCM01000251    AAAB01008839    EAA05914.2    GAMC01015522    JAB91033.1    CCAG010018508    EZ422832    ADD19108.1    JN701479    AFD01672.1    JRES01000438    KNC31236.1    GFDG01000583    JAV18216.1    JXUM01101438    GAPW01006329    KQ564648    JAC07269.1    KXJ71963.1    CAQQ02199335    GAMD01003200    JAA98390.1    GGFM01000853    MBW21604.1    GGFK01002193    MBW35514.1    ADMH02002133    GGFL01004250    ETN58438.1    MBW68428.1    JTDY01005185    KOB67277.1    JXJN01003724    OUUW01000006    SPP82293.1    CH379060    EAL33611.1    CM000158    EDW90243.1    CH902624    EDV33426.1    CH480822    EDW55490.1    CH954179    EDV56644.1    CM000361    CM002910    EDX05247.1    KMY90551.1    AE014134    KX531555    AHN54498.1    ANY27365.1    X01760    M11381    AY071701    DQ440105    CH477305    ABF18138.1    EAT44155.1    EAT44156.1    EAT44157.1    CH963857    EDW75788.1    GFDG01000584    JAV18215.1    CP012523    ALC38634.1    GFDL01007429    JAV27616.1    DS233203    EDS28661.1    APGK01035628    BT127427    KB740928    KB632064    AEE62389.1    ENN77883.1    ERL88470.1    CH940649    EDW63804.1    CH916368    EDW03696.1    GDAI01001230    JAI16373.1    AJVK01004326    GANO01001261    JAB58610.1    KA647457    AFP62086.1    CH933807    EDW13194.1    GFDG01001445    JAV17354.1    AXCN02000013    KQ971359    EFA08214.1    KC109793    AGF80276.1    GALX01001323    JAB67143.1    GFDF01001776    JAV12308.1    CVRI01000055    CRL00946.1    NNAY01003318    OXU19632.1    LNIX01000003    OXA58237.1    KQ982721    KYQ51643.1    KQ976529    KYM81742.1    ADTU01020810    GL437197    EFN70874.1    KQ979147    KYN22439.1    UFQS01000382    UFQT01000382    SSX03436.1    SSX23801.1    KQ978231    KYM96145.1    GDJX01018289    JAT49647.1    UFQS01000215    UFQT01000215    SSX01438.1    SSX21818.1    AAZX01000038    AAZX01005632   

Proteomes

UP000005204    UP000007151    UP000053240    UP000053268    UP000075886    UP000075902    + More
UP000095301    UP000095300    UP000218220    UP000076408    UP000075883    UP000075903    UP000075884    UP000075881    UP000075920    UP000075882    UP000007062    UP000092444    UP000075900    UP000075880    UP000037069    UP000069940    UP000249989    UP000015102    UP000000673    UP000069272    UP000037510    UP000092460    UP000075885    UP000192221    UP000268350    UP000001819    UP000002282    UP000007801    UP000001292    UP000008711    UP000000304    UP000000803    UP000008820    UP000007798    UP000092553    UP000002320    UP000019118    UP000030742    UP000008792    UP000001070    UP000092462    UP000009192    UP000007266    UP000183832    UP000215335    UP000198287    UP000075809    UP000078540    UP000005205    UP000000311    UP000078492    UP000078542    UP000002358   

PRIDE

H9JHL4    B5AFH2    P00037    P00039    X2J6D4    P84029    + More

Pfam

PF00034   Cytochrom_C

Interpro

IPR002327   Cyt_c_1A/1B        + More
IPR036909   Cyt_c-like_dom_sf       
IPR009056   Cyt_c-like_dom       

SUPFAM

SSF46626   SSF46626       

Gene 3D

1.10.760.10    

ProteinModelPortal

H9JHL4   B5AFH2   S4PFX0   A0A212FHK7   A0A023HN92   P00037   + More
A0A1E1WBD4   P00039   A0A194RD50   A0A194PUJ9   A0A2H1VC35   I4DMY7   J9XNY4   A0A0A7BZ22   A0A0K8V7Y8   A0A034WSY6   A0A0C9QHE0   A0A182Q5W5   A0A182UEJ7   A0A0A1WEW8   A0A1I8N8V4   A0A1L8EGQ8   A0A1I8PA92   A0A1L8EFJ2   A0A2W1BRS8   A0A2A4J518   A0A182Y5R9   A0A182MW21   A0A182V5I4   A0A182NE79   A0A182JYE7   A0A182VV18   A0A182L5Q7   Q7PSA9   W8B1Y3   D3TN30   A0A182RGH3   A0A182IU63   J9PXA8   A0A0L0CG59   A0A1L8EHW6   P12831   P00035   A0A023EEY5   T1GBF5   T1DN44   A0A2M3YZB0   A0A2M4A3X4   W5J4W4   A0A182F4E1   A0A0L7KVI2   A0A1B0AUU2   A0A182P953   A0A1W4VWL4   A0A3B0JN44   Q29MT2   B4P9B4   B3MU97   B4I534   B3NNJ3   B4Q7E9   X2J6D4   P84029   P84030   Q1HRI9   B4MVR8   A0A1L8EHT1   P00036   A0A0M4E497   A0A1Q3FJF9   B0XHT8   J3JW09   B4LSR5   B4JEH6   A0A0K8TQD8   A0A1B0GN46   U5EWT7   T1PF88   A0A182N4T5   B4KG55   A0A1I8Q8P7   A0A1L8EFA6   A0A182QUW1   D6WVZ4   M1PFE4   V5H2S9   A0A1L8E0Q4   A0A1J1IMI1   A0A232EMU0   A0A226EM57   A0A151WUW2   A0A195BBZ7   A0A158NMU9   E2A6T0   A0A151JBR5   A0A336M3A4   A0A195C685   A0A1D1Y4U9   A0A336M714   K7IXL7  

PDB

5C0Z     E-value=7.3646e-42,     Score=422

KEGG

101738358    K08738 cytochrome c | (RefSeq) cytc; cytochrome c

PATHWAY

04214    Apoptosis - fly - Bombyx mori (domestic silkworm)
04215    Apoptosis - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0009055   GO:0005739   GO:0046872   GO:0070469   GO:0020037   GO:0005758   GO:0006123   GO:0006122   GO:0055114   GO:0005829   GO:0006119   GO:0005743   GO:0000287   GO:0015934   GO:0005576   GO:0016042   GO:0005634   GO:0006334   GO:0003779   GO:0016021  

PANTHER

PTHR11961  

Subcellular location

Mitochondrion intermembrane space  

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00018

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.16825

outside

1  -  108

 

 

Pi

280.866687

Theta

220.041405

Tajima's D

0.905776

CLR

0

CSRT

0.633268336583171

Interpretation

Uncertain