Gene

KWMTBOMO01303

Pre Gene Modal

BGIBMGA009013

Annotation

Sentrin-specific_protease_[Operophtera_brumata]

Location

Bomo_Chr3(-):7689942-7692024      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.613 PlasmaMembrane   Reliability : 1.085

CDS

ATGGCAAAAGCATCTGTTGTGTTAAGTTTTCATGATATATTGCTTCATCGGTCTGATATAGAATTACTGGAAGGTCCGCATTGGTTGAATGATACGATAATATCATTTTACTTTGAATATCTCGAAAAAGTTGTGTTCAGTAAAGAGAGTGATCTATTATTTGTGTCTCCAGAGGTAACACAATGTATAAAAATGGTTCAAACAGAAGAAATAAAGACTTTTCTAGAACCGCTTGATGTGAACTTGAAGAAGTTTGTGTTCTTTGCCTTGAATGACAATAATACTCCAGATATGGCAGGTGGCTCCCATTGGAGCCTACTTGTTTATTCAAGGCCAGAGAACTGCTTCTTCCATTTAGATTCTTCACAAGCAACAAATCATGATGTTGCTTGGGAATTTGCAAGCCATATAATGTCATATCTTGCCAAAGGGGGTTCCATTAACTTTGTCGACAAGGAATGCATTCAGCAAAGTAACGGCTATGACTGTGGAATTCATGTAATAATCAATGCAGAGAGGCTTGCTGAATACTCTTGTGATGTTACCATGTGTTAA

Protein

MAKASVVLSFHDILLHRSDIELLEGPHWLNDTIISFYFEYLEKVVFSKESDLLFVSPEVTQCIKMVQTEEIKTFLEPLDVNLKKFVFFALNDNNTPDMAGGSHWSLLVYSRPENCFFHLDSSQATNHDVAWEFASHIMSYLAKGGSINFVDKECIQQSNGYDCGIHVIINAERLAEYSCDVTMC

Uniprot

H9JHL5   A0A0L7KVL8   A0A2A4J671   S4PXU9   A0A2W1BLE0   A0A2H1VC33   + More
A0A023EJW9   A0A182G440   A0A1Y1LFY8   E0VQE1   A0A2M4BZE8   A0A182FLI6   A0A2J7Q959   Q179X8   W5JVX8   A0A1W4X9H4   A0A1B0CV02   A0A182K2V5   A0A2M4AT16   A0A182Y6Y5   A0A182N3E4   A0A2P8ZEI2   A0A182P0U1   A0A182RLL2   A0A182X2H2   Q7QHR4   A0A182HY69   A0A182TY24   A0A182WFM6   A0A182LHC6   A0A084VR21   A0A1Q3F837   B0XF62   U5EZA9   A0A182MDY6   D6WYW7   A0A182IXQ4   A0A182QIW3   A0A182VKD7   J3JVT9   A0A1B0GQF7   A0A336M6D3   A0A034VRG2   A0A0A1XB95   A0A0K8UQ10   A0A232ET42   K7IXL0   W8BF28   U4TUK6   N6SZB8   A0A210QSH5   A0A0Q5VZI0   B4HP91   B4QCT0   Q7JUX2   A0A0P4VSF4   A0A0R1DQB9   E1JH43   A0A0J9RBU6   R4WSK8   B3NS38   A0A0L0BUX2   T1PG56   B4P5D4   C0PV27   A0A2R7VX62   A0A1B0G7S1   A0A1A9UH13   A0A1A9ZI31   A0A1B6HQW8   A0A0P9BX41   A0A1I8Q4S2   A0A1A9WPP4   A0A1A9Y0P7   A0A1B0B4D4   A0A0Q9W2Y3   A0A0Q9XAN6   A0A3B0JNJ5   A0A3B0JVP2   B4LJQ3   B4MY68   B4KT88   B4JW50   B3MCA9   T1GDP9   A0A1B6LMV8   A0A067RJR1   A0A3B0J227   A0A1W4UJH0   A0A0M4EVF7   A0A1B6GQ56   A0A0R3NR06   A0A1W4U6P0   Q292E1   B4GDN5   A0A3N0XTI3   B4KT90  

Pubmed

19121390    26227816    23622113    28756777    24945155    26483478    + More
28004739    20566863    17510324    20920257    23761445    25244985    29403074    12364791    14747013    17210077    20966253    24438588    18362917    19820115    22516182    25348373    25830018    28648823    20075255    24495485    23537049    28812685    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    23691247    26108605    25315136    24845553    15632085   

EMBL

BABH01012799    JTDY01005185    KOB67278.1    NWSH01002950    PCG67236.1    GAIX01004408    + More
JAA88152.1    KZ150048    PZC74464.1    ODYU01001762    SOQ38409.1    JXUM01032192    GAPW01004238    KQ560948    JAC09360.1    KXJ80235.1    JXUM01006941    KQ560227    KXJ83738.1    GEZM01056866    JAV72582.1    DS235418    EEB15597.1    GGFJ01009251    MBW58392.1    NEVH01016943    PNF25127.1    CH477343    EAT43057.1    ADMH02000250    ETN67245.1    AJWK01029929    GGFK01010615    MBW43936.1    PYGN01000079    PSN54914.1    AAAB01008816    EAA05220.3    APCN01004496    ATLV01015425    KE525013    KFB40415.1    GFDL01011372    JAV23673.1    DS232900    EDS26475.1    GANO01001124    JAB58747.1    AXCM01001995    KQ971363    EFA07853.1    AXCN02001111    BT127357    AEE62319.1    AJVK01007205    UFQS01000198    UFQT01000198    SSX01208.1    SSX21588.1    GAKP01014814    GAKP01014812    GAKP01014810    GAKP01014808    GAKP01014806    JAC44138.1    GBXI01005643    GBXI01003529    JAD08649.1    JAD10763.1    GDHF01025622    GDHF01024676    GDHF01023550    GDHF01011666    JAI26692.1    JAI27638.1    JAI28764.1    JAI40648.1    NNAY01002333    OXU21525.1    AAZX01000028    GAMC01009279    GAMC01009278    JAB97277.1    KB631579    ERL84447.1    APGK01058731    KB741291    ENN70573.1    NEDP02002179    OWF51662.1    CH954179    KQS62846.1    CH480816    EDW47540.1    CM000362    CM002911    EDX06741.1    KMY93165.1    AE013599    AY119635    AAF58530.1    AAM50289.1    GDRN01100882    GDRN01100881    JAI58470.1    CM000158    KRJ99466.1    ACZ94401.1    KMY93164.1    AK417692    BAN20907.1    EDV56340.2    JRES01001422    KNC23024.1    KA647797    AFP62426.1    EDW90796.2    BT072883    ACN67107.1    KK854143    PTY12052.1    CCAG010016893    GECU01030638    JAS77068.1    CH902619    KPU76085.1    JXJN01008264    CH940648    KRF79482.1    CH933808    KRG05341.1    OUUW01000001    SPP75139.1    SPP75138.1    EDW60562.2    CH963894    EDW77057.1    EDW10600.2    CH916375    EDV98188.1    EDV36209.2    CAQQ02023992    GEBQ01014912    JAT25065.1    KK852428    KDR24047.1    SPP75137.1    CP012524    ALC41850.1    GECZ01010494    GECZ01005230    JAS59275.1    JAS64539.1    CM000071    KRT01695.1    EAL24921.3    CH479181    EDW31692.1    RJVU01061435    ROJ36095.1    EDW10602.2   

Proteomes

UP000005204    UP000037510    UP000218220    UP000069940    UP000249989    UP000009046    + More
UP000069272    UP000235965    UP000008820    UP000000673    UP000192223    UP000092461    UP000075881    UP000076408    UP000075884    UP000245037    UP000075885    UP000075900    UP000076407    UP000007062    UP000075840    UP000075902    UP000075920    UP000075882    UP000030765    UP000002320    UP000075883    UP000007266    UP000075880    UP000075886    UP000075903    UP000092462    UP000215335    UP000002358    UP000030742    UP000019118    UP000242188    UP000008711    UP000001292    UP000000304    UP000000803    UP000002282    UP000037069    UP000095301    UP000092444    UP000078200    UP000092445    UP000007801    UP000095300    UP000091820    UP000092443    UP000092460    UP000008792    UP000009192    UP000268350    UP000007798    UP000001070    UP000015102    UP000027135    UP000192221    UP000092553    UP000001819    UP000008744   

PRIDE

H9JHL5    Q7JUX2    C0PV27   

Pfam

PF02902   Peptidase_C48        + More
PF00919   UPF0004
PF04055   Radical_SAM
PF01938   TRAM

Interpro

IPR038765   Papain-like_cys_pep_sf        + More
IPR003653   Peptidase_C48_C       
IPR005839   Methylthiotransferase       
IPR006463   MiaB_methiolase       
IPR006638   Elp3/MiaB/NifB       
IPR007197   rSAM       
IPR038135   Methylthiotransferase_N_sf       
IPR020612   Methylthiotransferase_CS       
IPR023404   rSAM_horseshoe       
IPR013848   Methylthiotransferase_N       
IPR002792   TRAM_dom       
IPR000855   Peptidase_C5       

SUPFAM

SSF54001   SSF54001       

Gene 3D

3.40.50.12160     3.80.30.20    

ProteinModelPortal

H9JHL5   A0A0L7KVL8   A0A2A4J671   S4PXU9   A0A2W1BLE0   A0A2H1VC33   + More
A0A023EJW9   A0A182G440   A0A1Y1LFY8   E0VQE1   A0A2M4BZE8   A0A182FLI6   A0A2J7Q959   Q179X8   W5JVX8   A0A1W4X9H4   A0A1B0CV02   A0A182K2V5   A0A2M4AT16   A0A182Y6Y5   A0A182N3E4   A0A2P8ZEI2   A0A182P0U1   A0A182RLL2   A0A182X2H2   Q7QHR4   A0A182HY69   A0A182TY24   A0A182WFM6   A0A182LHC6   A0A084VR21   A0A1Q3F837   B0XF62   U5EZA9   A0A182MDY6   D6WYW7   A0A182IXQ4   A0A182QIW3   A0A182VKD7   J3JVT9   A0A1B0GQF7   A0A336M6D3   A0A034VRG2   A0A0A1XB95   A0A0K8UQ10   A0A232ET42   K7IXL0   W8BF28   U4TUK6   N6SZB8   A0A210QSH5   A0A0Q5VZI0   B4HP91   B4QCT0   Q7JUX2   A0A0P4VSF4   A0A0R1DQB9   E1JH43   A0A0J9RBU6   R4WSK8   B3NS38   A0A0L0BUX2   T1PG56   B4P5D4   C0PV27   A0A2R7VX62   A0A1B0G7S1   A0A1A9UH13   A0A1A9ZI31   A0A1B6HQW8   A0A0P9BX41   A0A1I8Q4S2   A0A1A9WPP4   A0A1A9Y0P7   A0A1B0B4D4   A0A0Q9W2Y3   A0A0Q9XAN6   A0A3B0JNJ5   A0A3B0JVP2   B4LJQ3   B4MY68   B4KT88   B4JW50   B3MCA9   T1GDP9   A0A1B6LMV8   A0A067RJR1   A0A3B0J227   A0A1W4UJH0   A0A0M4EVF7   A0A1B6GQ56   A0A0R3NR06   A0A1W4U6P0   Q292E1   B4GDN5   A0A3N0XTI3   B4KT90  

PDB

2BKR     E-value=2.6381e-36,     Score=377

KEGG

NA   

GO

GO:0008234   GO:0051539   GO:0016740   GO:0006400   GO:0043065   GO:0000338   GO:0019784   GO:0004197   GO:0008233   GO:0006508   GO:0000287   GO:0015934   GO:0005576   GO:0016042   GO:0005634   GO:0006334   GO:0003779   GO:0016021  

Length:

184

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00184

Exp number, first 60 AAs:

0.00058

Total prob of N-in:

0.05502

outside

1  -  184

 

 

Pi

248.14477

Theta

187.804357

Tajima's D

0.662707

CLR

0.194112

CSRT

0.562721863906805

Interpretation

Uncertain