Gene

KWMTBOMO01300  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008874

Annotation

PREDICTED:_FAS-associated_factor_2_[Papilio_xuthus]

Location

Bomo_Chr3(+):7621265-7628975      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.351

CDS

ATGGATCTTGAAGACAATGCTTTGGGTTTGACCCAGGATCAGACCGATAAAATTTTACAATTTCAAGACTTAACTGGCATTGAAGACATGTCAATATGTAGAGATGTTTTGCAGAGACACCAATGGGATCTAGAGGTAGCAATTCAAGAACAATTGAATATTAGAGAAGGGCGCCCCTCTGTGTTTGCCACAGAAGCTCGGGCACCACCTGTTGTACATGACCACATTGCACAGCAAGTTTTTACTGAAGAACCACCAGAGGGACCCGGAGGTGTCAGGGGCCTAATACGTTATGTTGTTAATCTAGTTGTCTCAATGTGCTATAGTACAATTTCATCTGTATTAAACTTGCTTTTAAGTTTTGTACGTAATGATGATAGAAGACTGGCAACTGATCCATTAGCAGATGTAATGAATTTCATCAGTAGCTACCAAACAAAATTCAATGCACACCCAGTCTTCTATCAGGGAACTTATGCTCAAGCTCTAAACGATGCTAAGAACGAGCTCAGATTCCTAATTGTTTACTTACATTCAGATTCTGCACCAGAAACACAGAATTTCTGCAGAACAACATTAGCAGATCCCGAAGTAGTCCAATATATAAATACGCATGCATTGTTCTGGGGTTGCTCAGTCGAGAGTGGGGAAGGTTGGCGCGTCGCTCAGTCGGTGGGAGGTCGGCGATATCCTCTTTTGTGCGTTGTCTGCGTGCGGGAACATCGCATGACTGTAGTCGCTCGAAGTGAAGGGGCCTGTTCCGCCGAAATACTTATGCAGCGTCTTCGTCAAGTTGTCAGTGAAAACGAGGGTCACTTGGCTGCCGCTCGAGCGGATAGAGTGGAACGCGAAGTGACAGCGCGGCTGAGGGCTGCCCAGGACGAAGCATACGCCGAATCCCTCGCGGCCGACCAGGAGAAGGAGAGACGAAAAGCGGCCGCCCGTGAATTAGAACAGTTACAGCAACAACAGTACTTAGAGGAATTGGAGCAAGAGGAACGCCGGAAACAAGAGGTGGTGGAGGCTCGTAAAGCGATGGCGTCTCGTCTGCCGTTGGAGCCGTCGGGCGGCGCTGACACCGTGGTGCTTCTGATCCGTCTGCCAGACGGCGAACGTCTCACTCGCAGATTTTCACATTTCCACACCACTCAGGATCTATACGACTTTGTGTTCAGCCATCCGCAGTCTCCGGAAGAATTCGAGATAACGACAAACTTTCCCAAACGCGTGTTAGCCCGAGGAGCGTCCAACTTGTTGGACGTGGGACTGAAGGATCGAGACGTGTTGTTCGTTAACGATATCAACGCTTGA

Protein

MDLEDNALGLTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRPSVFATEARAPPVVHDHIAQQVFTEEPPEGPGGVRGLIRYVVNLVVSMCYSTISSVLNLLLSFVRNDDRRLATDPLADVMNFISSYQTKFNAHPVFYQGTYAQALNDAKNELRFLIVYLHSDSAPETQNFCRTTLADPEVVQYINTHALFWGCSVESGEGWRVAQSVGGRRYPLLCVVCVREHRMTVVARSEGACSAEILMQRLRQVVSENEGHLAAARADRVEREVTARLRAAQDEAYAESLAADQEKERRKAAARELEQLQQQQYLEELEQEERRKQEVVEARKAMASRLPLEPSGGADTVVLLIRLPDGERLTRRFSHFHTTQDLYDFVFSHPQSPEEFEITTNFPKRVLARGASNLLDVGLKDRDVLFVNDINA

Uniprot

H9JH77   A0A2H1VVK1   A0A194R871   A0A2W1BHY7   A0A212F4G4   A0A2A4J1H4   + More
A0A1Q3F6M6   A0A1Q3F6M0   B0XAP2   U5EWD1   Q17DA0   A0A3B0K8X8   A0A0K8TN65   A0A0M4ERX1   B3MM71   A0A023ETD9   Q29LE0   A0A1L8DM56   A0A1W4VM42   A0A182GTC5   A0A182RJ99   E0VQE6   B4I5K1   A0A182M8B0   B4P9X3   A0A2M4AK37   B3NLA5   A0A182W7G8   A0A2M3Z9L3   A0A2M4BNG2   W5JDM5   B4MYS8   A0A182XZV5   A0A182JEN8   A0A182PD12   Q9VJ58   A0A182S9A8   A0A182NTK4   B4LTS3   A0A084W5Y0   O77047   B4Q8X6   A0A1B6C6X3   A0A182JXT4   B4JAN7   W8APP1   A0A1A9UNR8   D3TN73   A0A0L0BQZ7   A0A1Y1LTJ6   A0A1A9W0Q3   A0A1B0C1N7   A0A0A1WWA7   A0A1L8DM72   A0A0K8URV1   A0A1A9YIS5   A0A067RA97   A0A034VZP4   A0A182F1I9   A0A1I8MWG9   A0A182U3I4   T1PC86   T1PL87   A0A336M8X6   B4KGA1   A0A1B0A7N0   V5GZD6   A0A182QSJ4   A0A1I8P390   A0A224XCV5   A0A182UM10   A0A182WT35   A0A182L1Y5   Q7Q3P6   A0A182HV32   A0A1B6EXC1   A0A1B0GB94   A0A1B6LIR6   A0A1B6M7B8   A0A069DTI1   A0A1W4WYR3   A0A0V0G8G6   A0A023F8M5   A0A1B0CVU1   A0A2J7QQC2   A0A1J1HZ92   E2BW74   U4U2Z3   A0A0N7Z985   R4FLP8   A0A195DSM1   A0A2M4AL85   D2CG01   A0A195ATY1   A0A026WQN2   A0A0A9XUE8   A0A158NPV1  

Pubmed

19121390    26354079    28756777    22118469    17510324    26369729    + More
17994087    24945155    26483478    15632085    23185243    20566863    17550304    20920257    23761445    25244985    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24438588    22936249    24495485    20353571    26108605    28004739    25830018    24845553    25348373    25315136    20966253    12364791    14747013    17210077    26334808    25474469    20798317    23537049    27129103    18362917    19820115    24508170    30249741    25401762    26823975    21347285   

EMBL

BABH01012801    BABH01012802    BABH01012803    ODYU01004705    SOQ44871.1    KQ460597    + More
KPJ13842.1    KZ150048    PZC74468.1    AGBW02010367    OWR48635.1    NWSH01004310    PCG65233.1    GFDL01011824    JAV23221.1    GFDL01011830    JAV23215.1    DS232592    EDS43831.1    GANO01001470    JAB58401.1    CH477298    EAT44329.1    OUUW01000004    SPP79978.1    GDAI01001804    JAI15799.1    CP012523    ALC39987.1    CH902620    EDV30886.1    JXUM01000242    JXUM01000243    JXUM01000244    JXUM01000245    GAPW01001487    JAC12111.1    CH379060    EAL34105.1    KRT04474.1    GFDF01006531    JAV07553.1    JXUM01017940    JXUM01017941    DS235418    EEB15602.1    CH480822    EDW55657.1    AXCM01003126    CM000158    EDW90314.1    GGFK01007820    MBW41141.1    CH954179    EDV54755.1    GGFM01004476    MBW25227.1    GGFJ01005362    MBW54503.1    ADMH02001688    ETN61433.1    CH963913    EDW77267.1    AE014134    AY051515    AAF53697.1    AAK92939.1    AHN54571.1    CH940649    EDW63974.1    ATLV01020706    KE525305    KFB45624.1    AB013610    BAA33466.1    CM000361    CM002910    EDX05408.1    KMY90866.1    GEDC01028144    GEDC01016573    JAS09154.1    JAS20725.1    CH916368    EDW03845.1    GAMC01018558    JAB87997.1    EZ422875    ADD19151.1    JRES01001507    KNC22403.1    GEZM01046895    JAV76972.1    JXJN01024139    GBXI01010978    JAD03314.1    GFDF01006532    JAV07552.1    GDHF01023234    GDHF01010745    JAI29080.1    JAI41569.1    KK852639    KDR19659.1    GAKP01011919    JAC47033.1    KA645548    AFP60177.1    KA649527    AFP64156.1    UFQT01000502    SSX24817.1    CH933807    EDW11088.1    GALX01002608    JAB65858.1    AXCN02000795    GFTR01006199    JAW10227.1    AAAB01008964    EAA12408.2    APCN01002491    GECZ01027212    JAS42557.1    CCAG010011564    GEBQ01016427    JAT23550.1    GEBQ01008147    JAT31830.1    GBGD01001526    JAC87363.1    GECL01001983    JAP04141.1    GBBI01001000    JAC17712.1    AJWK01031243    NEVH01012087    PNF30776.1    CVRI01000037    CRK93275.1    GL451091    EFN80106.1    KB631948    ERL87412.1    GDKW01001251    JAI55344.1    GAHY01001293    JAA76217.1    KQ980487    KYN15915.1    GGFK01008228    MBW41549.1    DS497677    EFA11847.1    KQ976745    KYM75480.1    KK107148    QOIP01000009    EZA57414.1    RLU18772.1    GBHO01022806    GBHO01022794    GBRD01017890    GDHC01004407    JAG20798.1    JAG20810.1    JAG47937.1    JAQ14222.1    ADTU01022757   

Proteomes

UP000005204    UP000053240    UP000007151    UP000218220    UP000002320    UP000008820    + More
UP000268350    UP000092553    UP000007801    UP000069940    UP000001819    UP000192221    UP000075900    UP000009046    UP000001292    UP000075883    UP000002282    UP000008711    UP000075920    UP000000673    UP000007798    UP000076408    UP000075880    UP000075885    UP000000803    UP000075901    UP000075884    UP000008792    UP000030765    UP000000304    UP000075881    UP000001070    UP000078200    UP000037069    UP000091820    UP000092460    UP000092443    UP000027135    UP000069272    UP000095301    UP000075902    UP000009192    UP000092445    UP000075886    UP000095300    UP000075903    UP000076407    UP000075882    UP000007062    UP000075840    UP000092444    UP000192223    UP000092461    UP000235965    UP000183832    UP000008237    UP000030742    UP000078492    UP000007266    UP000078540    UP000053097    UP000279307    UP000005205   

PRIDE

H9JH77    Q9VJ58    O77047   

Pfam

PF00789   UBX        + More
PF14529   Exo_endo_phos_2
PF05175   MTS
PF17827   PrmC_N

Interpro

IPR001012   UBX_dom        + More
IPR036249   Thioredoxin-like_sf       
IPR006577   UAS       
IPR029071   Ubiquitin-like_domsf       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR019874   Release_fac_Glu-N5_MeTfrase       
IPR040758   PrmC_N       
IPR007848   Small_mtfrase_dom       
IPR029063   SAM-dependent_MTases       
IPR002052   DNA_methylase_N6_adenine_CS       
IPR004556   HemK-like       
IPR009060   UBA-like_sf       

SUPFAM

SSF52833   SSF52833        + More
SSF54236   SSF54236       
SSF56219   SSF56219       
SSF53335   SSF53335       
SSF46934   SSF46934       

Gene 3D

3.60.10.10    

ProteinModelPortal

H9JH77   A0A2H1VVK1   A0A194R871   A0A2W1BHY7   A0A212F4G4   A0A2A4J1H4   + More
A0A1Q3F6M6   A0A1Q3F6M0   B0XAP2   U5EWD1   Q17DA0   A0A3B0K8X8   A0A0K8TN65   A0A0M4ERX1   B3MM71   A0A023ETD9   Q29LE0   A0A1L8DM56   A0A1W4VM42   A0A182GTC5   A0A182RJ99   E0VQE6   B4I5K1   A0A182M8B0   B4P9X3   A0A2M4AK37   B3NLA5   A0A182W7G8   A0A2M3Z9L3   A0A2M4BNG2   W5JDM5   B4MYS8   A0A182XZV5   A0A182JEN8   A0A182PD12   Q9VJ58   A0A182S9A8   A0A182NTK4   B4LTS3   A0A084W5Y0   O77047   B4Q8X6   A0A1B6C6X3   A0A182JXT4   B4JAN7   W8APP1   A0A1A9UNR8   D3TN73   A0A0L0BQZ7   A0A1Y1LTJ6   A0A1A9W0Q3   A0A1B0C1N7   A0A0A1WWA7   A0A1L8DM72   A0A0K8URV1   A0A1A9YIS5   A0A067RA97   A0A034VZP4   A0A182F1I9   A0A1I8MWG9   A0A182U3I4   T1PC86   T1PL87   A0A336M8X6   B4KGA1   A0A1B0A7N0   V5GZD6   A0A182QSJ4   A0A1I8P390   A0A224XCV5   A0A182UM10   A0A182WT35   A0A182L1Y5   Q7Q3P6   A0A182HV32   A0A1B6EXC1   A0A1B0GB94   A0A1B6LIR6   A0A1B6M7B8   A0A069DTI1   A0A1W4WYR3   A0A0V0G8G6   A0A023F8M5   A0A1B0CVU1   A0A2J7QQC2   A0A1J1HZ92   E2BW74   U4U2Z3   A0A0N7Z985   R4FLP8   A0A195DSM1   A0A2M4AL85   D2CG01   A0A195ATY1   A0A026WQN2   A0A0A9XUE8   A0A158NPV1  

PDB

2DAM     E-value=2.95162e-11,     Score=165

KEGG

101739090    K18726 FAS-associated factor 2 | (RefSeq) FAS-associated factor 2

GO

GO:0008276   GO:0003676   GO:0005515   GO:0015074   GO:0000287   GO:0015934   GO:0005576   GO:0016042   GO:0005634   GO:0006334   GO:0003779   GO:0016021  

Length:

436

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.0242

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08804

outside

1  -  436

 

 

Pi

235.187585

Theta

163.078294

Tajima's D

1.527726

CLR

0.06268

CSRT

0.793760311984401

Interpretation

Uncertain