SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01294
Annotation
PREDICTED:_uncharacterized_protein_LOC106142202_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.331
 

Sequence

CDS
ATGATATCGTTGCTGTCCCAACAAAGCGACTTGTACAACAGCATCCGAGGAAGCGTACAGAATCAGTCACGGGACTTAGGCGGGCAAGAGACATTACTTTTGAACATGGTTCGTGCTAGGAAAGTACAAGACGTCGAAGCACAAGACAAGACTCTTGACCTTAAAGATGACCTAACAGATGATCAACGAAATGAGGGCTGCATCCATGGTATTAGTATGCGCACAACAGATCGCAGTATCTCCCGGTCTCGTTTCTCTCGTGTCTCAACACGTCGTGATATGGACATACCGTCCATCTTAGCTTTCACAGCCAACACTACCCAGCCAGTACAATTAAAAATGCCGGTTGGCCAGCAAAGTAATATCTTGAAGCGAGAAGAATTACTACGGTGGTCTATTCGTAAAGCCATTTGCCCTGTGTGTTCACAAAAATGGAGAGACAGAAGTTCTATAACAAGCATTAAGTATTCTGGTCTCAAAAGAAACACAGCAAATGAGATACCCACAATTATAGCTCCAGCCAGATTAAGATCTTCAATTAATATGGCTTAG
Protein
MISLLSQQSDLYNSIRGSVQNQSRDLGGQETLLLNMVRARKVQDVEAQDKTLDLKDDLTDDQRNEGCIHGISMRTTDRSISRSRFSRVSTRRDMDIPSILAFTANTTQPVQLKMPVGQQSNILKREELLRWSIRKAICPVCSQKWRDRSSITSIKYSGLKRNTANEIPTIIAPARLRSSINMA

Summary

Pfam
PF00107   ADH_zinc_N        + More
PF08240   ADH_N
Interpro
IPR036291   NAD(P)-bd_dom_sf        + More
IPR011032   GroES-like_sf       
IPR013149   ADH_C       
IPR020843   PKS_ER       
IPR013154   ADH_N       
SUPFAM
SSF50129   SSF50129        + More
SSF51735   SSF51735       

Ontologies

Topology

Length:
183
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0004
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05968
outside
1  -  183
 
 

Population Genetic Test Statistics

Pi
156.888321
Theta
141.140662
Tajima's D
0.211553
CLR
0.715884
CSRT
0.430828458577071
Interpretation
Uncertain
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