Silkworm Genome Informatics Database

Gene

KWMTBOMO01292

Pre Gene Modal

BGIBMGA009015

Annotation

PREDICTED:_uncharacterized_protein_LOC101739889_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr3(-):7525777-7529924 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.404 PlasmaMembrane Reliability : 1.333

CDS

ATGATTATCATACAGGGTGTAACAGTGTGCGGTCACAGTACTGTTGCTGAAGTTGTATGCGAGCCATTACAAGATGCGGGAACGGTGGTGGCTGGCATTCCCACTGGACCTTTATCAGTACCGCTTGCAGTTCCTCTCGGAGGACCTCTACCTCTTCCCGAGACGACACCCCCTTCAGCACCTCCAGCCGCTTTGCTATTCCTTGGTGGCTCCAAAGCACCCGTGGATCCAAGAGCTTCTGCTACGGTGCTCGAAGGTGAAGTTTTGGTAGCGGAATATCAGCCCCCGCAATGGGACGGTCGAGACCTTGAAGTTTTTTTGGCATGGGAGAAAATATACGCTTCATCGCTATTCTCGGCAATAGAACTTTACGGAAAACCACTCCTCCGGGCCGCAGTGATTTCAAGAGAAGAGTACCATATACTCTTCTATTATTTAGAAGCAGTTTCCGAAGCTAGTGACGCTCTCGCTGAACGAATGCGAAAATATATCGATTCTGGTCTAATAACGTCCGAAGCAACAACAGGCAATAATGAACCTGTAACAACTTCAAAAAATACTGTCGTCGAAGAAGAAGAACCCCAGAGCCTTCTTACTGAATTAATGCAAGAAGGAGTAATTTCCCAACATGATATTGACGCTTCGTCTATTATAACCGGCTCTGAGGTAAATGAGAATGCAGAAAATCGTAAGTCAGATGATTTGTCAAGTTTGTCGTCGATCAGTACAAGTATACGAAAAATTATAGTTGATATACCATTGGATTGCAACGAGTCTGTCACTGATGCTTCCATTGTGGAGAGTAATGATAACGTCACTACAGTAACCATAAGAAATAGCGGTCAATGTTGCATTGACCACAGGATATCGGCTGACGTTACGGACAATGTGTGGGCTAATGTCAAATGGAATTTTCTTAATCCACATGATTTTGGCTATGATCCCGTTCCAAGCGTCAAAAGAAGCCGGTCTGATTCTGCTATAACTCCAGTCACACAGCGAAAGAATGAAGACTTGTATGAAAGACTACAAGACGCCGATGGAGAGTCTTGCGGGAGCATTACTCCCTACGAATCAATAGAAGATCTATATGAATGCATAAAAAATGGGCAGTATTCAAACTCTGCCGTAGAAGAATCTCCATCTACAGAAAATCAATCTGAGCCACAGTATCCAGACTATTACGAAAAGACTAGTGTAAATCGCCAGAGCTCAGCCAGTAGTGAAAAGAGTGGATCATCGTCTGCGTTTCAATTTTCAAAGTGTGGATCGAGTGAGTCCACGGACGTGTTTATATCATGCGAGTCAACTAGCGGTATAAGTTCATTTCTCTCGAAGGCTATACCGCAATCACTGAAGCGTCGAGACTTACCGCCTCCTCCTGCTGAAGGTAACGCTAGTGAAAGTGCCATCCTGATGAAGCAACTTTTTATGGGTGAATTAATGGATGTTTACGGAGAATATTTGTCCGCATACCCCTATGCTCGTGCTCTGCTCCGTCGGAAAGCGCGTCGAGATGAACATTTTGCTGCGCTCGCGGATATTCGACGAGGAGCCGCTAAATACACGATCGCTGACTACCTCGAATTACCGGTGAGTATTCATAGCTTTTCATAA

Protein

MIIIQGVTVCGHSTVAEVVCEPLQDAGTVVAGIPTGPLSVPLAVPLGGPLPLPETTPPSAPPAALLFLGGSKAPVDPRASATVLEGEVLVAEYQPPQWDGRDLEVFLAWEKIYASSLFSAIELYGKPLLRAAVISREEYHILFYYLEAVSEASDALAERMRKYIDSGLITSEATTGNNEPVTTSKNTVVEEEEPQSLLTELMQEGVISQHDIDASSIITGSEVNENAENRKSDDLSSLSSISTSIRKIIVDIPLDCNESVTDASIVESNDNVTTVTIRNSGQCCIDHRISADVTDNVWANVKWNFLNPHDFGYDPVPSVKRSRSDSAITPVTQRKNEDLYERLQDADGESCGSITPYESIEDLYECIKNGQYSNSAVEESPSTENQSEPQYPDYYEKTSVNRQSSASSEKSGSSSAFQFSKCGSSESTDVFISCESTSGISSFLSKAIPQSLKRRDLPPPPAEGNASESAILMKQLFMGELMDVYGEYLSAYPYARALLRRKARRDEHFAALADIRRGAAKYTIADYLELPVSIHSFS

Uniprot

H9JHL7 A0A2A4JQY2 A0A2H1WYB1 A0A2W1BNN1 A0A0L7LGU0 A0A212F8F8 + More
A0A194R8L9 A0A194PVI9

Pubmed

19121390 28756777 26227816 22118469 26354079

EMBL

BABH01012810 BABH01012811 NWSH01000859 PCG73820.1 ODYU01011955 SOQ57997.1 + More
KZ150048 PZC74476.1 JTDY01001138 KOB74763.1 AGBW02009746 OWR50003.1 KQ460597 KPJ13849.1 KQ459591 KPI97008.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000007151 UP000053240 UP000053268 + More

PRIDE

H9JHL7

Interpro

IPR035899 DBL_dom_sf

SUPFAM

SSF48065 SSF48065

Gene 3D

1.20.900.10

ProteinModelPortal

H9JHL7 A0A2A4JQY2 A0A2H1WYB1 A0A2W1BNN1 A0A0L7LGU0 A0A212F8F8 + More
A0A194R8L9 A0A194PVI9

KEGG

101739889 K20641 Rho GTPase-activating protein 20 | (RefSeq) uncharacterized LOC101739889

GO

GO:0005089 GO:0035023 GO:0000287 GO:0015934 GO:0005576 GO:0016042 GO:0005634 GO:0006334 GO:0003779 GO:0016021

Length:

538

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13544

Exp number, first 60 AAs:

0.01721

Total prob of N-in:

0.00267

outside

1 - 538

Pi

217.93946

Theta

191.770211

Tajima's D

0.417718

CLR

13.667207

CSRT

0.485725713714314

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics