SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01290
Pre Gene Modal
BGIBMGA008872
Annotation
PREDICTED:_putative_inorganic_phosphate_cotransporter_isoform_X3_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.052
 

Sequence

CDS
ATGCAGCCAGCGTATTATATCGCTTTGATAACGGGGGTAATGGCAATGAATGGCTCTGTGACTTTGACAACTGCTGTGAATGGACACGACTTGACAAGGAATTTCGCTGGCACCGTAAACGGCATAGTGTTTGCAATGATGACTGTTGCAGGAATAATAACTCCTTATGTTACTGCCTTTTTCACAAAGGACGATGAGACAAGTGCAGCTTTATGGCAGCCCGTGTTTTATACGGGAGGTTCAGTATTCATGGCCACTGGATTGCAATTCTTGTTCCTGGGTTCGACAAAGACTCAATATTGGAATGATATCACCAAAGAGAAAGATGCAGAACATCAAGAAAAAAATTAA
Protein
MQPAYYIALITGVMAMNGSVTLTTAVNGHDLTRNFAGTVNGIVFAMMTVAGIITPYVTAFFTKDDETSAALWQPVFYTGGSVFMATGLQFLFLGSTKTQYWNDITKEKDAEHQEKN

Summary

EMBL
HM593516    ADP37709.1    BABH01012813    BABH01012814    RSAL01000245    RVE43588.1    + More
AGBW02009746    OWR50000.1    KQ459591    KPI97012.1    KQ460597    KPJ13853.1    KZ150048    PZC74481.1    JTDY01006140    KOB66249.1    ODYU01008801    SOQ52717.1    BABH01012815    KZ150406    PZC71007.1    PZC71003.1    AJWK01010573    GAIX01003661    JAA88899.1    UFQS01004245    UFQT01004245    SSX16273.1    SSX35593.1    AGBW02014013    OWR42393.1    RVE43591.1    AJVK01018285    AJVK01018286    ODYU01011929    SOQ57955.1    GFDF01009331    JAV04753.1    SSX16272.1    SSX35592.1    GFDF01009307    JAV04777.1    BABH01012820    GFDF01009308    JAV04776.1    GFDF01009270    JAV04814.1    AXCM01002864    KPJ13856.1    CVRI01000043    CRK95943.1    AJVK01018288    GDUN01000670    JAN95249.1    PZC71004.1    ADMH02001505    ETN62273.1    CH477609    EAT38347.1    GFDF01009282    JAV04802.1    GFDF01009298    JAV04786.1    GFDF01009250    JAV04834.1    GFDF01009179    JAV04905.1    UFQT01004233    SSX35584.1    JXUM01141927    JXUM01141928    JXUM01141929    KQ569333    KXJ68659.1    SSX16274.1    SSX35594.1    GFDL01004430    JAV30615.1    DS232315    EDS39867.1    AXCN02002286    GGFK01006719    MBW40040.1    ADMH02000978    ETN64527.1    GEDC01005492    JAS31806.1    GEDC01030330    JAS06968.1    GEZM01055166    GEZM01055165    GEZM01055164    GEZM01055163    JAV73102.1    GDHF01013359    JAI38955.1    KB632256    ERL90684.1    APGK01050866    KB741178    ENN73149.1    GECU01019291    GECU01006759    JAS88415.1    JAT00948.1    EAT38350.1    AAAB01008849    ATLV01022615    KE525334    KFB47842.1    GGMS01013445    MBY82648.1    APCN01005121    GEDC01005745    JAS31553.1    GECU01002415    JAT05292.1    GGFJ01005122    MBW54263.1    CVRI01000074    CRL07878.1    CP012524    ALC41364.1    GGFM01002056    MBW22807.1    CH902619    EDV36833.1    GGFJ01005123    MBW54264.1    ATLV01022614    KFB47840.1    GECZ01011112    JAS58657.1    GEZM01058094    JAV71912.1    AB162351    BAD72917.1    AB162349    CM000362    CM002911    BAD72899.1    EDX07882.1    KMY95223.1    EAA07084.5    CM000158    EDW91430.1    KRJ99840.1    AE013599    BT023815    AAF57499.1    AAZ66322.1    GAKP01011643    JAC47309.1    GBXI01009158    JAD05134.1    GDHF01001414    JAI50900.1   
Pfam
PF07690   MFS_1        + More
PF00416   Ribosomal_S13
PF00379   Chitin_bind_4
Interpro
IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR001892   Ribosomal_S13       
IPR027437   30s_Rbsml_prot_S13_C       
IPR018269   Ribosomal_S13_CS       
IPR010979   Ribosomal_S13-like_H2TH       
IPR000618   Insect_cuticle       
SUPFAM
SSF103473   SSF103473        + More
SSF46946   SSF46946       
Gene 3D

Ontologies

Topology

Length:
116
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
67.42622
Exp number, first 60 AAs:
44.6335
Total prob of N-in:
0.03117
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  26
inside
27  -  38
TMhelix
39  -  61
outside
62  -  70
TMhelix
71  -  93
inside
94  -  116
 
 

Population Genetic Test Statistics

Pi
201.630301
Theta
161.626261
Tajima's D
0.77835
CLR
0.323734
CSRT
0.599270036498175
Interpretation
Uncertain
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