SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01272  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009022
Annotation
Group_XIIA_secretory_phospholipase_A2_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 3.124
 

Sequence

CDS
ATGTTTCGTAATGTTATTACTGTTGCCGAGAAATTTAAATCTTTACATGATGTATTCGATGCAGCCGTAGAAGAAGAATGTATATTTACTTGTCCAGGAGGCCAAAAGCCAGTTAGAAACCGAAATCATATACCGAAATCTGATGGATGTGGTTCATTGGGATTTGAAATATCATCGGAATACTTACCATTAAATGAGATGACAAAATGCTGTGATGCTCATGATATTTGTTACGACACATGCAACAGCGGAAAAGAAGTATGTGACCTAGAGTTTAAGAGATGTCTCTATAATTACTGCAATTCATATAAATCTGTGAACATTGCTGGTGAGACTATCACTAAAGGTTGTAAAGGTGCAGCTAAATTGCTATTTACAGGAACACTTACATTAGGATGTAAATCATATTTGGATGCACAGAAGAATGCTTGTTACTGTCCAGACAAGAATACCAAGTACAAGAAATATTCAGGAAATGGTGAATTGTAG
Protein
MFRNVITVAEKFKSLHDVFDAAVEEECIFTCPGGQKPVRNRNHIPKSDGCGSLGFEISSEYLPLNEMTKCCDAHDICYDTCNSGKEVCDLEFKRCLYNYCNSYKSVNIAGETITKGCKGAAKLLFTGTLTLGCKSYLDAQKNACYCPDKNTKYKKYSGNGEL

Summary

Similarity
Belongs to the phospholipase A2 family.
EMBL
BABH01012837    KQ459591    KPI97024.1    KQ460597    KPJ13866.1    KZ150082    + More
PZC73843.1    ODYU01007223    SOQ49812.1    NWSH01006459    PCG63420.1    AGBW02014900    OWR40909.1    GAIX01000079    JAA92481.1    JTDY01001603    KOB73396.1    KQ971361    EFA08691.1    KQ980713    KYN14284.1    KQ982649    KYQ53077.1    GGFJ01009056    MBW58197.1    GAMD01001811    JAA99779.1    KQ435714    KOX79218.1    ADMH02000399    ETN66693.1    GGFJ01009292    MBW58433.1    GAMD01000048    JAB01543.1    GGFM01005627    MBW26378.1    CVRI01000055    CRL01605.1    GGFK01009762    MBW43083.1    KQ976467    KYM84159.1    ADTU01007751    KQ977935    KYM98685.1    GL887532    EGI70870.1    AAAB01008816    EAA05247.3    KQ981905    KYN33561.1    AXCM01001638    KK107447    QOIP01000001    EZA50705.1    RLU26341.1    KQ760382    OAD60693.1    KQ434931    KZC11779.1    AXCN02001743    GALA01000932    JAA93920.1    JXJN01007077    GEZM01063663    JAV69031.1    KZ288204    PBC33208.1    JXUM01123682    GAPW01003807    KQ566744    JAC09791.1    KXJ69857.1    CH478160    EAT33743.1    EAT33745.1    EJY58073.1    GANO01003979    JAB55892.1    ATLV01021410    KE525318    KFB46461.1    GL763494    EFZ19572.1    AJVK01003776    LBMM01002569    KMQ94650.1    CCAG010010400    EZ423573    ADD19849.1    DS232028    EDS32474.1    CH916366    EDV97281.1    KQ414615    KOC68767.1    CH933809    EDW18801.1    GFDL01007292    JAV27753.1    CH902618    EDV40142.1    CH940647    EDW70029.1    BT126697    KB631611    AEE61659.1    ERL84648.1    CH963876    EDW76871.1    GL435760    EFN72747.1    APGK01056605    APGK01056606    KB741277    ENN71078.1    KK852544    KDR21645.1    CP012525    ALC44802.1    CH891734    EDW99834.1    CH954178    EDV52173.1    CH480815    EDW41638.1    CM000363    CM002912    EDX10610.1    KMY99879.1    AE014296    AF349541    AAF49567.2    AAK30169.1    AGB94596.1    KMY99880.1    OUUW01000009    SPP85016.1    UFQT01000755    SSX26996.1    CH379069    EAL30940.2    CH479188    EDW40384.1    APCN01001469    GAMC01005718    JAC00838.1    GDHF01020711    JAI31603.1    GAKP01005547    JAC53405.1    GBXI01005675    GBXI01001130    JAD08617.1    JAD13162.1    UFQT01000940    SSX28120.1    GGFK01011387    MBW44708.1    AJWK01019202    AJWK01019203    AJWK01019204    MH055790    AWU67138.1    JRES01001048    KNC25975.1    GECZ01006628    JAS63141.1   
Pfam
PF06951   PLA2G12        + More
PF12796   Ank_2
PF07693   KAP_NTPase
PF00505   HMG_box
Interpro
IPR033113   PLipase_A2_His_AS        + More
IPR036444   PLipase_A2_dom_sf       
IPR010711   PLA2G12       
IPR002110   Ankyrin_rpt       
IPR013761   SAM/pointed_sf       
IPR036770   Ankyrin_rpt-contain_sf       
IPR011646   KAP_P-loop       
IPR020683   Ankyrin_rpt-contain_dom       
IPR009071   HMG_box_dom       
IPR036910   HMG_box_dom_sf       
SUPFAM
SSF48619   SSF48619        + More
SSF48403   SSF48403       
SSF47769   SSF47769       
SSF47095   SSF47095       
Gene 3D

Ontologies

Topology

Subcellular location
Secreted  
Length:
162
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0049
Exp number, first 60 AAs:
0
Total prob of N-in:
0.17484
outside
1  -  162
 
 

Population Genetic Test Statistics

Pi
206.532101
Theta
150.394367
Tajima's D
1.173407
CLR
0
CSRT
0.706214689265537
Interpretation
Uncertain
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