SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01270
Pre Gene Modal
BGIBMGA009023
Annotation
PREDICTED:_uncharacterized_protein_LOC101741830_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.226
 

Sequence

CDS
ATGCATAAAATAAAATTTGAGCTTCCTGATAACTCTGGAGAATCTACAAAGTATTTAATTACGCTTTTGATTAAAGAAATACATCCTAGTATTGGAGAAATTCGGAAGAAATTACAAGTCAAACACATAGAGGAGCAGGAATTAATTAAAATTCGGGAAGTAATAGCACTGTGTTGTAATCAAATAAAAAAATGTGTGGTAAACCTTCTTGGAATATTCAAGTTAGAGTACAATCAAGGAATATTTCTTCAGGAAAGCCGCCAATGTCACGTAGAGAGATTGGAATGGTGCATAGACAGATTAAATACAATAGACCAACATCTTGAAAAAAGAAACAGTAATTTGTCTAATGACAATACAGATGATTCAATTAATGTGACCACAATGTATTTTGTGAACTGGATTGACCACACATTTGAGGTTTTATCAAAATTATCCGAAGTTGTCTATAAAAATGATTATAAAGAAAATTTTGGGATGTGTGAGCTCTGGAAATCTGAATTGCTGCAGATACTGAGCGATCTTCATCTTGCAATTGATGAGCTACTACTATCTGCTATGACGCTTTGCAAATATTGTCTACCAAGTGATCAGCACATAGTCAAAGCTAGATGTCAAGTTGTATTACGGGAAACAAAAGCACTTATGACTGAGTTAATTAGTGGGGATGTGTCTTCAACAATTAAATTATCACCAGCAACTTTGAGATTACCCATAATGCCTTCTAATATCAATGTCCTTATTGATGTATTAAAGGATGTTCTGTATGTTCTTGAAACGAACACAAATACTGCTTTACTTGCATTATTAATACACTGTTTCAGTTACAGTAAGTCTCCTATTGATATATTTAAAGAACATTTTAGTAGCAGCTCAAGAGGGGTCTGTGACTGTTTGGTGAAAACTGAAATTGATGATACTGAAGATTGTATCTTTGTGAAAGAATTTGATTTGTATAATGAGAGGTTGTTGCAAATTGGTTCATTTGCCATATCATGTTCTTCAGATCAAAGCCGTATACTATCTGTACGAAGCGGTATAGCAAGTCTCGAAGCATTGGATCCTCACCTAGTACCGGCGCTAATGATGTCACCTGAAAGTTATCATTCGATGTTGCTGATGACTTCATGGCTACAAGAAGTTCAGGAAATACGAGACAGCGTGTTTTTGATTGTGGAACCCACTGCTTTCTCGGAGAAATCAAAACAAATGATGCACGAAAAATTACTGGAATTAGTAAAATCAAATTGTTACAACAATAGTCATGTGTGTGTTGTGATTAACATTGGAAGTATTGTTTATGATTTTTTTGAAGCTTACAATAAGAATGAGCCAACTGCTGTGAATGATTATGACAAAATAAAACCATTGTTAATAGATTTGAAGAAAGCGGTAAACGAATGCAAGACAGTATCAAATTTACTTGCCTCCGAAAATGATTTTATGTACGATATAAAAACCCATACTAACAAACAGGCGTCGAATGAACAGTTATTGAAGAGACTCAAACTATTGTACACCGTAATAAACAAAATAAATATGATTTTACATCCGAAGCAAAACGAGGAACAGTTGTTCGAAGATGATGACGTTCATGTGTGTAAAAATGAAACACATACAGTTTATAAAAATAAAAATTCAGACGTCGATAGTCCAAAAAAGACTGATGACATTATGTCTAAGAGTGTATTTGCCAGGACCAGTAATGTAAGATCGTCGACACGAAACTTCCCCCTAATTAAATTAACAAAGCATCTGAAACTAAGACAATGTGAAGAACTGAGTTTTTCCGTAGAATTGGACAATTTGTTGAATGGTTATAAGCCCAAAGCTGGTCGCGACGAAACTTTCAACTTGAATAAGAATCTGCAAAGAGTACGAGAAAGATCAGTTTTGTACAATTTTTCGCCTATTAAAAATAGGTCGTCATTGAGAAAAGCTGTCTTGAATAGACATTGCAAATCTCAAGAGAAGATTTTAGAAAGAAAACTTGATGATGTCCGTTCCATAACAGATAAAGACATTGATGTTACCGAAGAAAACTTTACCTTACAATTGACTGATGTCCTTAACGAAATGAACGATATGACAAGTATTGTATCTAATACGAAGGCTGGGTTTCCATCAACTGAATTGAGAACAAATAAGGCGAACTGTTCCAATAAAATCCATCAGAATACAATATCTAAATATGTCTGGAACATTTCCACAAGTTCCAGAGCTTTTCAATCTTGTGATGAAACTGCAGTGTCTTGTTCATCGAATATGTCACAACCATCTAACGTCACGACATTAGAACGCATTAATGATTTGGATTTTATCGATATTAAGTTAAATAATCTTAAAACTGAGTTTGAAACATCAGTATAA
Protein
MHKIKFELPDNSGESTKYLITLLIKEIHPSIGEIRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGIFKLEYNQGIFLQESRQCHVERLEWCIDRLNTIDQHLEKRNSNLSNDNTDDSINVTTMYFVNWIDHTFEVLSKLSEVVYKNDYKENFGMCELWKSELLQILSDLHLAIDELLLSAMTLCKYCLPSDQHIVKARCQVVLRETKALMTELISGDVSSTIKLSPATLRLPIMPSNINVLIDVLKDVLYVLETNTNTALLALLIHCFSYSKSPIDIFKEHFSSSSRGVCDCLVKTEIDDTEDCIFVKEFDLYNERLLQIGSFAISCSSDQSRILSVRSGIASLEALDPHLVPALMMSPESYHSMLLMTSWLQEVQEIRDSVFLIVEPTAFSEKSKQMMHEKLLELVKSNCYNNSHVCVVINIGSIVYDFFEAYNKNEPTAVNDYDKIKPLLIDLKKAVNECKTVSNLLASENDFMYDIKTHTNKQASNEQLLKRLKLLYTVINKINMILHPKQNEEQLFEDDDVHVCKNETHTVYKNKNSDVDSPKKTDDIMSKSVFARTSNVRSSTRNFPLIKLTKHLKLRQCEELSFSVELDNLLNGYKPKAGRDETFNLNKNLQRVRERSVLYNFSPIKNRSSLRKAVLNRHCKSQEKILERKLDDVRSITDKDIDVTEENFTLQLTDVLNEMNDMTSIVSNTKAGFPSTELRTNKANCSNKIHQNTISKYVWNISTSSRAFQSCDETAVSCSSNMSQPSNVTTLERINDLDFIDIKLNNLKTEFETSV

Summary

Pfam
PF05482   Serendipity_A
Interpro
IPR001033   Alpha_catenin        + More
IPR008837   Serendipity_A       

Ontologies

Topology

Length:
789
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00858
Exp number, first 60 AAs:
0.00023
Total prob of N-in:
0.00040
outside
1  -  789
 
 

Population Genetic Test Statistics

Pi
198.083329
Theta
176.601214
Tajima's D
0.352089
CLR
1.158524
CSRT
0.47637618119094
Interpretation
Uncertain
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