Silkworm Genome Informatics Database

Gene

KWMTBOMO01269

Pre Gene Modal

BGIBMGA009024

Annotation

neuropeptide-like_precursor_1_precursor_[Bombyx_mori]

Location

Bomo_Chr3(-):7179261-7186918 View in EpiBrowser

Full name

Neuropeptide-like precursor 1

Location in the cell

Mitochondrial Reliability : 1.698 Nuclear Reliability : 1.918

CDS

ATGAAGGGTCGGTCGCCGACGGGAAAGCGTCGTGGATGTTTTCTTCTCATCGTTCTCTTCGCAGTAATATTCTCAGCTTATGTTGAGCAGGTATTGAGTCTGCCTACTGAACCAGAAAATCAATGGCCCACTTTTCCACGAAGAAATATTGCTACTCTCGCAAAAAATGGATATTTGAGGAATTCCGGCGCTAATAGCTACAAACGGAGCATCTCAATATTGGCCAAGAACGGAATGCTTCCAACGTATCGATCTCCTTATGTGGGTACAGACAAACAGGAACACGAAGACGAATCTCAAGAGAAAAGGAATTTGGCTTCAATTGCAAGACTTCGCAGTTATTCGGCTATGAAGAGAAACATTCAAGCTCTGGCCAGGGATGGCTACCGTATGGGAAGGGGACAGTACAATACTCAAAACAATAAACGCAATATAGCAGCTCTCGCACGTAACGGACTTTTGCATAAAAAAGACGAAATTAATGGCGACGAATATTACTTTCCATTTTATCAGAATCCGATTCCCCCTTTATCGGAAATCGATGGGCCTTTTGATATCAACGAAATGTATGATTTCCAGCAAACTATTAATCCTGATATGTTTCCGCCCCTTTCGCAAGTTGCCAAGCGTAGCGCTTTGGGTCCCGAAAACGACTACGCTGTTCTCAAAGACTTTGAAGACAACGCGTATTTGAAGAAGGGCTCTGTAGGCTTGCCGGCTCATGGTCTTTATAGACCGTTGTACAGGGACCCAAACATTCGCACCAAGCGATACATACTCTCTTTACCAGACTATATTGAGACAAATAACATCGATGACAAAAACGATAATGAGAACGAAGACAAGCGTTCTGTCGGAAGCATTCCACTGACGAGAATTTCGGAATTAGGGAATATTTCGCTGCTCCCGAAGTTGACTCAGCAGTCAATTCAGACGACGCCGACGTACCGCCGCCGGCAGTACCTCCTCACTCGCACCCAACCGGCAGAATCCTCCACCGACCGCTAA

Protein

MKGRSPTGKRRGCFLLIVLFAVIFSAYVEQVLSLPTEPENQWPTFPRRNIATLAKNGYLRNSGANSYKRSISILAKNGMLPTYRSPYVGTDKQEHEDESQEKRNLASIARLRSYSAMKRNIQALARDGYRMGRGQYNTQNNKRNIAALARNGLLHKKDEINGDEYYFPFYQNPIPPLSEIDGPFDINEMYDFQQTINPDMFPPLSQVAKRSALGPENDYAVLKDFEDNAYLKKGSVGLPAHGLYRPLYRDPNIRTKRYILSLPDYIETNNIDDKNDNENEDKRSVGSIPLTRISELGNISLLPKLTQQSIQTTPTYRRRQYLLTRTQPAESSTDR

Keywords

Amidation Cleavage on pair of basic residues Direct protein sequencing Neuropeptide Secreted Signal

Feature

peptide Neuropeptide-like precursor 1-1

Uniprot

B3IWA6 H9JHM6 A0A0S1U1W7 A0A385H8Z3 M4QEM1 C0HKY1 + More
A0A385H8Y4 A0A385H8Y1 A0A2H1W9N2 A0A2W1BLV4 A0A194R9D2 A0A0L7LDB7 A0A212EHE4 A0A194PUE0

Pubmed

19121390 30171635 29466015 28756777 26354079 26227816 + More
22118469

EMBL

AB362222 BAG49563.1 BABH01012838 KT005984 ALM30335.1 MH028113 + More
AXY04282.1 KC340932 AGH25564.1 MH028115 AXY04284.1 MH028114 AXY04283.1 ODYU01007223 SOQ49815.1 KZ150082 PZC73846.1 KQ460597 KPJ13870.1 JTDY01001603 KOB73395.1 AGBW02014900 OWR40906.1 KQ459591 KPI97026.1

Proteomes

UP000005204 UP000053240 UP000037510 UP000007151 UP000053268

PRIDE

B3IWA6 H9JHM6

Pfam

PF05482 Serendipity_A

Interpro

IPR008837 Serendipity_A + More
IPR001033 Alpha_catenin

ProteinModelPortal

B3IWA6 H9JHM6 A0A0S1U1W7 A0A385H8Z3 M4QEM1 C0HKY1 + More
A0A385H8Y4 A0A385H8Y1 A0A2H1W9N2 A0A2W1BLV4 A0A194R9D2 A0A0L7LDB7 A0A212EHE4 A0A194PUE0

KEGG

100174827 no KO assigned | (RefSeq) NPLP1; neuropeptide-like precursor 1

GO

GO:0007218 GO:0005576 GO:0016020 GO:0007349 GO:0005737

PANTHER

PTHR18914

Subcellular location

Secreted

SignalP

Position: 1 - 33, Likelihood: 0.927429

Length:

335

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.69162

Exp number, first 60 AAs:

20.69114

Total prob of N-in:

0.99704

POSSIBLE N-term signal

sequence

inside

1 - 11

TMhelix

12 - 34

outside

35 - 335

Pi

340.751442

Theta

190.677739

Tajima's D

2.088084

CLR

0.456138

CSRT

0.896755162241888

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics