SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01261  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008862
Annotation
Basic_juvenile_hormone-suppressible_protein_2_[Papilio_machaon]
Full name
Hexamerin-1.1       + More
Basic juvenile hormone-suppressible protein 2      
Alternative Name
AgHex-1.1
AgHexA
Location in the cell
PlasmaMembrane   Reliability : 2.837
 

Sequence

CDS
ATGTTGGTGCTATCTGTGATCACGTTGTATTTAGTTGCAATAGTAGTTTCAGATCCATTAGATGAATTTCGTCTCATGCATCAAGGTGAAATCGCATATGATGAAAATAAATTCTTAATGCAAATAGTTCCATCGGGATTTTCGCCCCATGCCCACGAATCAAAAAAAGTTGACGAAGTCCTGAATACTAATAATACATATTATAAAAACTTCTACAAATATGTAAAGAACGGGATTACCGCGAAAGGTCGAACTTTTACTGTTTATGACGATGACATGAGGAAAGCTGCCATAGCATTATTCCGTCTTTTTCAACAAGTTGAACAAGACGACTATGAAAAAATTTACGACTGGTCAGTTTTAAACATAAATAACGATATACTGAGATATATAAATTATGAACTGGATTGGACAGACGAAAGAGCTGAAGCGGAGGGTGTGTGGATAAACATACGTAAGTGTATTGAAAGAGGATTTATTGTTATGGATGGCATCACATTAAATATGAATAATGACGATCACGTGAGCATAATGGCTAAATTAATCAAGTCAAACCTTGATAATGCAAGAATGGCGAAAATCTTAAGAGAAATATTTGGTAATATGCGCAACAGACATCCTATTGACGAATACAACCCCGCACCTTCCGTATTTTATCACCCTGAAACATCACTAAGAGACCCTACCTTTTGGAAGATGATAGAGTATTATTTGAACGTAATGAAGTATTTTCGACATTTCATGGATCCGTTCTTAATGGAAGAGTATACAACAGAAGATTTTAATATTACTGGTGCCAATTTTACTAAAATGGAAACTTTTTTTGAATACTATCGTATACCGCTGAACAAAATTTTGTCTGCTGAAACTGGTTACATATCAAGAAAATGGCCGATGTTCGCAAGACAAAGACGAATAAATCATTCACCTTTAACATTAAATTTTACCGTTGACTCCAAAATTGACAAAAATGTCATAGTACGACTCTTTTTGGGACCCAACTGTAGCTTCAACAACTGTTGGGAACGTTTTGAGGAGTTTTACGAATTGGATATTTTTAACTTCACTCTACATACAGGACTTAACGTAATCAGTTGGAATCCACATAAATCAAAAAAATATTCATATTTTAAAGACGATATTTCACAGCATTACTTCCATAACTACGACTATAAAAAATCTGCACGTAAAGGTACAAAATTCAATTTGTTTAAATTTCCCGGCAACTTGGCAATACCTCGAGGACTTGAATCTGGTCTAAACTTTAAGTTGGCTATTATAATTACCCCTTCAGAAAATTCTTCAGTAATGGATCATGCACCAGAAGTAAATTATTATAAACAAGTCTCTTATGAGTACGATACAAAACCTTTAGGTTTTCCTTTTCATAGAAATTCGGGTTTTCAAAATTCGTTGGCATCTAACTATAGGCTTTTTGATATCAAAATTTACCACAGAAAGAGTGACGTTGATGAATCAGGCTATTTTTCTTCAAATCTGTATTAA
Protein
MLVLSVITLYLVAIVVSDPLDEFRLMHQGEIAYDENKFLMQIVPSGFSPHAHESKKVDEVLNTNNTYYKNFYKYVKNGITAKGRTFTVYDDDMRKAAIALFRLFQQVEQDDYEKIYDWSVLNINNDILRYINYELDWTDERAEAEGVWINIRKCIERGFIVMDGITLNMNNDDHVSIMAKLIKSNLDNARMAKILREIFGNMRNRHPIDEYNPAPSVFYHPETSLRDPTFWKMIEYYLNVMKYFRHFMDPFLMEEYTTEDFNITGANFTKMETFFEYYRIPLNKILSAETGYISRKWPMFARQRRINHSPLTLNFTVDSKIDKNVIVRLFLGPNCSFNNCWERFEEFYELDIFNFTLHTGLNVISWNPHKSKKYSYFKDDISQHYFHNYDYKKSARKGTKFNLFKFPGNLAIPRGLESGLNFKLAIIITPSENSSVMDHAPEVNYYKQVSYEYDTKPLGFPFHRNSGFQNSLASNYRLFDIKIYHRKSDVDESGYFSSNLY

Summary

Description
Larval storage protein (LSP) which may serve as a store of amino acids for synthesis of adult proteins.
Subunit
Homohexamer.
Similarity
Belongs to the hemocyanin family.
Keywords
Complete proteome   Glycoprotein   Reference proteome   Secreted   Signal   Storage protein   Direct protein sequencing  
Feature
chain  Hexamerin-1.1
EMBL
KQ459591    KPI97035.1    KQ460597    KPJ13879.1    KZ150082    PZC73857.1    + More
NWSH01003382    PCG66423.1    ODYU01008226    SOQ51637.1    JTDY01000570    KOB76639.1    KQ971363    EFA09145.1    KY086449    AUO15581.1    FM165290    CAQ63323.1    GU086323    ACY40651.1    KQ434823    KZC07220.1    AF020877    AF020878    AAC31880.1    AAC31881.1    AY422205    AAR32136.1    GU086322    ACY40650.1    PZC73860.1    AXCN02002869    GAMD01002466    JAA99124.1    AB253734    BAF32561.1    DQ004585    AAY26453.2    KY086440    AUO15573.1    AF020875    AF020876    AAC31878.1    AAC31879.1    KOB76640.1    APCN01001492    AF020874    AAC31877.1    DS231835    EDS32906.1    U51225    AF020870    AF020871    AF020872    AAAB01008960    AAAB01018287    U50475    ADMH02001880    ETN60689.1    KPJ13883.1    KY419215    AVC68641.1    AF020873    AAC31876.1    ADMH02002165    ETN58101.1    AY923852    AAX14951.1    NWSH01001869    PCG69846.1    AJ249469    CAB55603.1    ODYU01000210    SOQ34602.1    PZC73861.1    JX914501    AGG22606.1    KPI97038.1    AF032398    AAB86646.1    HG938297    CDN40925.1    SOQ34603.1    AJ249468    CAB55602.1    EFA09144.1    KPI97039.1    KQ971361    EFA09253.1    APCN01003557    CH940649    EDW63761.1    ATLV01021428    KE525318    KFB46508.1    KQ436240    KOX67353.1    CH478160    EAT33748.1    KPJ13882.1    AXCM01019787    HG938298    CDN40926.1    AB266595    BAF45385.1    JXUM01123104    KQ566681    KXJ69911.1    AGBW02013638    OWR43050.1    AM690365    CAM84196.1    GAMD01002460    JAA99130.1    L03281    AAAB01008848    APCN01003559    KY086438    AUO15571.1    KY086447    AUO15579.1    AB266596    BAF45386.1    U60988    AAB38773.1    CH477534    EAT39409.1    KF734080    AII31756.1    L07611    AAA29322.1    ADMH02000246    ETN67253.1    APCN01000846   
Pfam
PF00372   Hemocyanin_M        + More
PF03722   Hemocyanin_N
PF03723   Hemocyanin_C
Interpro
IPR005203   Hemocyanin_C        + More
IPR036697   Hemocyanin_N_sf       
IPR000896   Hemocyanin/hexamerin_mid_dom       
IPR014756   Ig_E-set       
IPR005204   Hemocyanin_N       
IPR037020   Hemocyanin_C_sf       
IPR008922   Unchr_di-copper_centre       
IPR013788   Hemocyanin/hexamerin       
IPR002227   Tyrosinase_Cu-bd       
SUPFAM
SSF48056   SSF48056        + More
SSF48050   SSF48050       
SSF81296   SSF81296       
PDB
3GWJ     E-value=2.28601e-20,     Score=245

Ontologies

Topology

Subcellular location
  
SignalP
Position:   1 - 17,         Likelihood:  0.920903
 
 
Length:
501
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.08760000000001
Exp number, first 60 AAs:
2.08176
Total prob of N-in:
0.11658
outside
1  -  501
 
 

Population Genetic Test Statistics

Pi
257.244207
Theta
205.256549
Tajima's D
0.628602
CLR
0.076386
CSRT
0.551772411379431
Interpretation
Uncertain
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