Gene

KWMTBOMO01253

Pre Gene Modal

BGIBMGA007548

Annotation

PREDICTED:_uncharacterized_protein_LOC107191251_[Dufourea_novaeangliae]

Location

Bomo_Chr3(-):6540653-6544940      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.879

CDS

ATGATGAAGCACATGTCCGATCGTATGGCAGCAATACCGGACGCAAAAGTTAAAATCAATGACGTGTTTTTACCATCATACGATCCGGACGCAAATATAGGAGTGCGAGAGTGGTGTAAGCATGTGACCACGGCCATGGAAACCTACAACCTGAGCGATTATGATGTCAGAATGAAAGTCGGTAGTTTGCTCAAAGGTCGTGCAAGGTTGTGGGTTGACAACTGGCTTATCTCAACCTCCACGTGGCAGGAATTGCGTGATGTTATGATAACAACCTTTGAACCTGAAAATAGGTATTCTCGTGATATAGTTCGTTTTCGGGAACATAGTTACGATAATTCAAAGGACATCACGCAGTTCTTATCACAGGCTTGGATGTTATGGAGACGTGTCACTAAGGATAAATTATCGGATGATGACGCGGTTGAGGCTGTGATTGGTTGCATTGGAGATGAGCGATTGAGAATCGAGTTGTTAAACGCCAGGGCTACTTCGGTACCAGAGTTGATTTCTGTAGCTTCCTCAATAAAGCGCAGTAAGCGACCTTATCCTGGTTCATCAAATATGCAACAGGGCCCTGTCAAACGACAACGATTCTCGGATAAGCCGTCTTTATATTGTCAACAGTGTAAAAAGCCCGGTCATGATACTCGAGATTGCCGTTACCGTGATAAAGCTGATAACCCTCAACTGCGACATCATGATGATAAAACCGTTCCTCAAAGGGATAATAAACCGACCTGTACGTTCTGTTCACGAACAGGTCACACATATGAAACTTGTTATAAACGTGAACGAGCAATTGTCTCGAATGTTAATTGCGTAGGTGCACCTAAATTAAACTCCATACCGGTGTTGATTGGAGGTTTAAAATTTTTCGGGATTTTTGATAGCGGGGCGGAATGTTCGGTAATACGCGAATCGGTTGCTTCAAAATTACCGGGTAAAAGGACGAATGTAGTTAATTATCTAAAGGGCTTAGGACAGTTTACAGTAGTGTCATTATCAACGTTGATAACCGTTTGTGTGATCGATGATATAAGGGTCGAACTTCATTTCCACATAGTCCCGGATTATGAAGTGTGTTCAGATATTTTAATAGGCATGAATCTTATGGAAAATACAAATTTAAGTGTGATAGTGAATTCAAAGGGCGTGGCATTGATTCATCAGCCCGCGATTTTCCACATGCGATTACAAAGCGAAAAGTTTGACAATTTGGATTGTGACTTGACGGATAGTGATCAAATAAACGAACTTAAGTTGCTATTAGCAAAATTTGAACATATTTTTATCCAGGGTTACCCTCACACGCGTGTTAATACCGGTGAACTCGAAATACGTCTGAAAGACCCCAACAAGTGTGTTGAGCGTAGGCCATATAGATTGAGTCCAATCGAACGACAAAAAGTTCGTGATATTGTGAGCGAGTTACTTGAACACAATATTATTCGAGAGAGCAAGTCACCTTTCTCCAGTCCGATAATATTAGTCAAAAAGAAAAACGGCAAAGATCGCATGTGCGTGGACTATCGCGAGCTGAATAGAAACACTCTTAGGGATCACTATCCTCTGCCTATAATTTCCGATCAAATAGACCAATTAGCGGGTGGTTATTACTTCTCTTCTTTTGATATGGCAGCAGGCTTTCATCAGATCCCCATTTCTAAAGGGTCTATTGAAAAGACTGCCTTCGTAACACCGGACGGCATGTACGAGTACTTGACCATGCCATTCGGTCTCAGTAATGCATGTTCCGTTTACCAGAGGTGCATGAATAGGGCTTTAGCTGACCTTCTAAATTCACCTGACCAGGTCTGTCAAGTGTACGTCGACGACGTACTAACAAAATGTTGTGAATTTACAGAAGGTTTGTCCCGTATCGAACGGGTACTTATCGCATTACAAGATGCCGGGTTTTCCATAAATATTGAGAAAACTGCCTTCTTTAAACGCTCTATCGAGTACTTGGGCAATATAGTTACAAACGGACAGGTTAGTCCTAGCCCAAAGAAAGTGGAGGCTTTAACGAAGGCACCTATTCCACGGACGGCTAAACAAGTAAGGCAATTCAATGGCCTCGCCGGATATTTTCGTCGTTTCATTCCCAATTTCTCGCGTGTGATGGTACCGCTTTATGAGCTAACAAAAAAAGACGCAAAATGGGAATGGAATGAAAGGCATGATGAGGCCAGAAATATAATCATACTGCATTTGTCTACTGCGCCTACCCTTGCATTATTTCAGGAAAACGCACCAGTTGAGCTTTACACAGATGCGAGCAGCCTCGGTTACGGCGCGGTACTGATTCAGATAATTGGAGGACGCCAGCATCCAGTCGCGTACATGAGCCAGCGTACCACTGACGCAGAGAGCCGCTACCATTCATATGAACTCGAGACGCTAGCAGTGGTGAGAGCAGTAAAACATTTTCGGCACTACCTATACGGCCGAAAATTCAAGATAATAACAGACTGTAACGCCTTGAAAGCATCTAAGCATAAGAAGGATTTACTGCCACGAATTCATCGCTGGTGGGCTTTTCTGCAGAACTACGAGTTCGAGGTCGAATATAGGAAAGGTGAGCGACTGCAGCACGCAGACTTTTTTAGCCGAAACCCTACAACTAAAATGGCGATCAACATCATGACCAAGGACGCAGAGTGGCTGCAAATTGAACAGCGTCGTGACGATACTCTTCGTCCTGTGATAAACAGCATGACAACCGACAACCCAACTCCCGGCTACGTTCTTGAGGAAGGCGTGCTGAAGAAATTACTCGCTGATCCTTCCATACTCGGTGCAATCCAGGCACAGCTCCATCCAATACAAAAACCTACTGCAGCGTTTCAAGTAGTCCACATAGACGTTACCGGAAAACTTGGTACGAGAAACTCTGAAGGTCAGGACGAATATGTGATAGTTATCATTGACGCCTTTACCAAATACATCCTACTTAGTTACTCTAACGACAAGAGTCAAAGCAGCAGTCTCGCAGCGCTGAAACGAGTCGTGCATTTGTTCGGGACCCCAGTCCAGGTAGTGGTTGATGGCGGCCGAGAATTTCTCGGCGAATTCAAAGCCTATTGCGACTGTTTTGGTATCAATTTACATGCTATAGCGCCAGGAGTAAGCCGAGCAAACGGGCAAGTGGAACGAATAATGAGTACCTTGAAAAATGCACTAACAATAATAAGAAATTATGACACTGAAAACTGGCAAACGGCCTTGGAAGCCCTTCAACTTGCATTTAATTGCACCCCACACAGAGTGACAGGGTGCGCGCCACTTACTCTCCTGACACGCCGTAAGCACACCGTTCCGCCAGAACTTTTAAGGTTGGTAGACATTGATAGCGAAACCGTCGATTTTGATATGCTCGATCAACACGTGCAACAGAAAATGGCGGCTGCAGCTGAATATGATAAGCATCGTTTTAACAGAAACAAAGCCAAGCTGCGTCCTTTTCAAAGAGGAGACTACGTCCTCATCAAAAACAACCCCAGAAATCAAACCAGCTTGGACCTGAAATACAGCGAGCCATACGAGATTTACAGAATAATGGACAATGACCGCTACATGGTAAAACGTGTGACCGGCAGAGGGCGCCCACGCAAGGTGGCGCACGATCAGCTGCGCCGGGCTCCACAGCCTGGGGAACAGGAAACCGTGTCGACGGGCGCCAACGATGACACCGAACAGCAGACCACAGCCCAAGTAGTCGATACACCGGATCCACCATCAACGTTATTAGACGCTTAA

Protein

MMKHMSDRMAAIPDAKVKINDVFLPSYDPDANIGVREWCKHVTTAMETYNLSDYDVRMKVGSLLKGRARLWVDNWLISTSTWQELRDVMITTFEPENRYSRDIVRFREHSYDNSKDITQFLSQAWMLWRRVTKDKLSDDDAVEAVIGCIGDERLRIELLNARATSVPELISVASSIKRSKRPYPGSSNMQQGPVKRQRFSDKPSLYCQQCKKPGHDTRDCRYRDKADNPQLRHHDDKTVPQRDNKPTCTFCSRTGHTYETCYKRERAIVSNVNCVGAPKLNSIPVLIGGLKFFGIFDSGAECSVIRESVASKLPGKRTNVVNYLKGLGQFTVVSLSTLITVCVIDDIRVELHFHIVPDYEVCSDILIGMNLMENTNLSVIVNSKGVALIHQPAIFHMRLQSEKFDNLDCDLTDSDQINELKLLLAKFEHIFIQGYPHTRVNTGELEIRLKDPNKCVERRPYRLSPIERQKVRDIVSELLEHNIIRESKSPFSSPIILVKKKNGKDRMCVDYRELNRNTLRDHYPLPIISDQIDQLAGGYYFSSFDMAAGFHQIPISKGSIEKTAFVTPDGMYEYLTMPFGLSNACSVYQRCMNRALADLLNSPDQVCQVYVDDVLTKCCEFTEGLSRIERVLIALQDAGFSINIEKTAFFKRSIEYLGNIVTNGQVSPSPKKVEALTKAPIPRTAKQVRQFNGLAGYFRRFIPNFSRVMVPLYELTKKDAKWEWNERHDEARNIIILHLSTAPTLALFQENAPVELYTDASSLGYGAVLIQIIGGRQHPVAYMSQRTTDAESRYHSYELETLAVVRAVKHFRHYLYGRKFKIITDCNALKASKHKKDLLPRIHRWWAFLQNYEFEVEYRKGERLQHADFFSRNPTTKMAINIMTKDAEWLQIEQRRDDTLRPVINSMTTDNPTPGYVLEEGVLKKLLADPSILGAIQAQLHPIQKPTAAFQVVHIDVTGKLGTRNSEGQDEYVIVIIDAFTKYILLSYSNDKSQSSSLAALKRVVHLFGTPVQVVVDGGREFLGEFKAYCDCFGINLHAIAPGVSRANGQVERIMSTLKNALTIIRNYDTENWQTALEALQLAFNCTPHRVTGCAPLTLLTRRKHTVPPELLRLVDIDSETVDFDMLDQHVQQKMAAAAEYDKHRFNRNKAKLRPFQRGDYVLIKNNPRNQTSLDLKYSEPYEIYRIMDNDRYMVKRVTGRGRPRKVAHDQLRRAPQPGEQETVSTGANDDTEQQTTAQVVDTPDPPSTLLDA

Uniprot

B7S8P8   A0A0A9WUU5   A0A0A9WTW7   Q24310   A0A0A9WJJ8   A0A0A9X1Z8   + More
A0A146M2J2   A0A023EZG2   A0A023EYH9   A0A023EY26   J9JZ77   A0A1W7R6G2   A0A1W7R6L8   A0A0J7KLK4   A0A0J7NF11   X1X5H2   A0A2S2NKJ2   J9JQ65   A0A034WRX5   X1XU22   W8C8Q1   W8B0V9   W8APB2   J9KLX4   A0A034VAM6   A0A2M4AEU2   Q24262   A0A0J7K890   T1PMR9   A0A0A1WKC8   Q961S4   A0A034VPR8   A0A0J7K9X8   L7ML53   L7LV95   A0A023F013   A0A023EYF0  

Pubmed

25401762    2464689    26823975    25474469    25348373    24495485    + More
8055714    25830018    25576852   

EMBL

EF710649    ACE75273.1    GBHO01032413    JAG11191.1    GBHO01032415    JAG11189.1    + More
X14037    CAA32198.1    GBHO01036023    GBHO01032007    JAG07581.1    JAG11597.1    GBHO01030786    JAG12818.1    GDHC01004980    JAQ13649.1    GBBI01004551    JAC14161.1    GBBI01004550    JAC14162.1    GBBI01004477    JAC14235.1    ABLF02014660    ABLF02042774    GEHC01000888    JAV46757.1    GEHC01000930    JAV46715.1    LBMM01005919    KMQ91096.1    KMQ91095.1    ABLF02004401    ABLF02013544    ABLF02013550    GGMR01005091    MBY17710.1    ABLF02005846    GAKP01001563    JAC57389.1    ABLF02017401    GAMC01007326    JAB99229.1    GAMC01015907    JAB90648.1    GAMC01020207    JAB86348.1    ABLF02017561    ABLF02041657    ABLF02042885    GAKP01019383    JAC39569.1    GGFK01005990    MBW39311.1    Z27119    CAA81643.1    LBMM01011782    KMQ86633.1    KA649989    AFP64618.1    GBXI01015151    JAC99140.1    AY050234    AAK84933.1    GAKP01014483    JAC44469.1    LBMM01010976    KMQ87102.1    GACK01000334    JAA64700.1    GACK01009043    JAA55991.1    GBBI01004613    JAC14099.1    GBBI01004549    JAC14163.1   

Proteomes

UP000007819    UP000036403   

PRIDE

Q24310    Q24262    Q961S4   

Pfam

PF17919   RT_RNaseH_2        + More
PF17921   Integrase_H2C2
PF00665   rve
PF00098   zf-CCHC
PF00078   RVT_1
PF17917   RT_RNaseH
PF00077   RVP
PF09668   Asp_protease
PF02037   SAP
PF03732   Retrotrans_gag

Interpro

IPR041577   RT_RNaseH_2        + More
IPR001584   Integrase_cat-core       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR041373   RT_RNaseH       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR018061   Retropepsins       
IPR019103   Peptidase_aspartic_DDI1-type       
IPR036361   SAP_dom_sf       
IPR003034   SAP_dom       
IPR005162   Retrotrans_gag_dom       
IPR034145   RP_RTVL-H-like       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       
SSF50630   SSF50630       
SSF68906   SSF68906       

Gene 3D

2.40.70.10     3.30.420.10     1.10.720.30    

CDD

cd06095  RP_RTVL_H_like

ProteinModelPortal

B7S8P8   A0A0A9WUU5   A0A0A9WTW7   Q24310   A0A0A9WJJ8   A0A0A9X1Z8   + More
A0A146M2J2   A0A023EZG2   A0A023EYH9   A0A023EY26   J9JZ77   A0A1W7R6G2   A0A1W7R6L8   A0A0J7KLK4   A0A0J7NF11   X1X5H2   A0A2S2NKJ2   J9JQ65   A0A034WRX5   X1XU22   W8C8Q1   W8B0V9   W8APB2   J9KLX4   A0A034VAM6   A0A2M4AEU2   Q24262   A0A0J7K890   T1PMR9   A0A0A1WKC8   Q961S4   A0A034VPR8   A0A0J7K9X8   L7ML53   L7LV95   A0A023F013   A0A023EYF0  

PDB

4OL8     E-value=9.95193e-70,     Score=674

KEGG

105841402    no KO assigned | (RefSeq) uncharacterized LOC105841402

GO

GO:0003676   GO:0008270   GO:0015074   GO:0008233   GO:0003964   GO:0004190   GO:0006508   GO:0004553   GO:0005634   GO:0006334   GO:0003779   GO:0016021  

Length:

1253

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.26688

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01189

outside

1  -  1253

 

 

Pi

33.917726

Theta

215.763695

Tajima's D

-1.72349

CLR

1362.583872

CSRT

0.0356482175891205

Interpretation

Uncertain