Silkworm Genome Informatics Database

Gene

KWMTBOMO01252

Pre Gene Modal

BGIBMGA008856

Annotation

PREDICTED:_cGMP-dependent_protein_kinase?_isozyme_2_forms_cD5/T2-like_isoform_X1_[Papilio_machaon]

Location

Bomo_Chr3(+):6346451-6381326 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.363

CDS

ATGAAAATCAAACATTATCCAGGAAAAGCGGTCATGGAGGACCCGTGGCTATCCCTCGGGGATAGAACTATGGACCTTGTCTATGCGGCAAACTGGGTCGGCGCTAAGAATCTTAATAAATGCAATTCTAACGACGATCAATCAAGTTCAAAATGTAATTCTATATCGAGGAGCAAATCATGTAGAGATGTCGGCCGTTCGGAAGAAAACGAATACAGCCAAAAAAAATACTCACAAGAAGACAGTGGGTGTTACTTTGATGTTCCTAATGAAAACATATCTCAATTAGCCAAATATCAACAAAATATAGAAGAAAAAGCTAGGACGAGTGATAATTACATTGCTCAAAACAAATTAAAGCACAGTTATAGTTTTAAAGATATGCCAAATGGCTATAAGCCTTCGACTCTGCGACGCGTGAAACGAAGAAATTTCACAGAATGGGACATCGAAGCATTTGGTTCGAATAGTAAACAGCCACCCGTTCCGCCACAACGTAAAGATTCTTTGAAATACGCACATCGACAGAGAAAAGTTGATTCAAAGAAAAATTACTATCCGTTACCTGATCCTGGTCCAGTACCTCCTGATCCATCATCAGAATCATATTATGAATATTATTCTAGAGTCAGTCAACAAAACAATGACACCGATAGCGATAAGCTAAAGCAGATCCAAAAAAGTGGTAAGAATGATAGAAATTCGCCAAATGAATACCCCAAACAAAACGGTAATACCGTGTACAAAATTATACATTCAATGGCCACCTTAGATCTGAACCCGATGAAAGTCAGAAACGGTAAACAAACTTTGGAATTGGATAGTGAACCGGAAGATTTGGGTCTATACATGCGGCCTATTAAACAGTCGTTATCTACATGCGATCAACTTCCGAACCACACTACGCAACCGGCGAACGAACGAAACGGACGCATCGAAGACGCTAAACCTAGCTTTCGTTCTAAATCATTAAGAGTTAAAAGCGAAGGTAGAGTACCACTTCGAGCGTACCTTGACACGGTCCAGCACAACAATGCGCAGTACAACGGTGTCACTGTCACGCAACCGAAAAGAAATCTGTCGCCGAGCGAACAGTTGACGCTAATGCAGTACGAAATGTTCAACGGAAGTAAGAACCAACTCGCACCGCCGATCAGCAACGGGTTCCACGCTGTTGATCCGTCTAAAGAAAGTGATTATCGGACTATAAATAGTGTTACAAAACAAATCAAACCCGATAAATATGGTAAGTTATATAACACCGTGAGAGTGAAAAGTGACGATAGATACGAAAGGTACAATGATATTACAAAATTCGCACCTCCGAAAGACCATATCAATGAGGAACGTGCAACTAATGGAAATGGTGTGTTTACGAGAAGTGCTAAAAGTTCATCTAGTGGTTCGGACTCTGATTTTTCAATACCACGGCCGAAATTAATAGTACCTGTTCATACCTATGGAACACGCAAGAGACGAACTGGGAATGTACAGCGTGATAGCACCGCAACGGAAGCTTCATTGGATGCGGGGATCGTGTTAGACGTGACACGATTGGAAGATTCGAGTCATAAGTTTAAGAAAAATGAAGAATCAGAAGGCCGAGTCGAAGTGTCGAGGGAGAACAAATACCTGAGCACGATGGCGCCAGGCAAGGTCTTCGGGGAACTGGCAATCCTGTACAACTGCAAGCGTACAGCTACCATCAAAGCCGCTACGGACTGCAGACTTTGGGCCATCGAACGACAATGCTTCCAAACGATTATGATGAGAACTGGCCTTATCAGACAGGCTGAATACACAGACTTCTTGAAGAGTGTACCGATCTTCAAGAACTTCCCCGAAGATACGTTGATTAAAATCTCCGATGTGTTGGAAGAGACTCATTACCAGAATGGAGACTATATTATTAGACAGGGTGCGAGAGGTGACACGTTCTTCATCATATCCAAAGGACAGGTTAAAGTTACACAAAAACTACCGAATAGTAACGACGAGAAATTCATCAGAACCCTCACGAAAGGAGACTTCTTCGGAGAGAAGGCCTTACAAGGGGACGACCTCCGAACGGCGAATATCGTCTGTGACTCACCAGACGGCACGACTTGTCTCGTTATAGACAGGGAAACATTCAATCAGCTGATATCCACACTGGACGAGATCCGAACCAAGTACAAGGATCTGGGTGATGACAGACAACGATTGAACGAAGAATTCGCCAACCTGCGTCTCTCGGATCTCCGCATTATCGCTACATTGGGTATCGGAGGCTTCGGTCGAGTGGAATTAGTGCAAATCCAAGGCGATTCGAGTCGCTCCTTCGCCTTAAAGCAGATGAAGAAGGCCCAGATCGTTGAGACGAGACAACAACAACACATAATGTCCGAAAAGGAGATAATGTCCGAAATGAACTGCGAATTCATAGTGAAGCTATACAAGACTTTCAAAGATCGCAAGTACTTGTACATGTTGATGGAGACTTGCCTCGGTGGAGAGCTATGGACCATTTTAAGAGATCGAGGACAATTTGACGACGCAACGACAAGATTCTACACGGCCTGTGTAGTTGAGGCCTTCCACTATCTACATTCTAGAAATATAATTTACAGGGATCTCAAACCAGAGAATCTACTGCTAGACTCGAAAGGTTACGTGAAACTGGTCGACTTCGGTTTCTCAAAGAAGCTGCAGGCGAGCCGTAAGACCTGGACGTTCTGCGGCACGCCAGAGTACGTCGCGCCCGAGGTCATCATGAACCGGGGCCACGATATCAGTGCGGACTATTGGTCTTTAGGTGTTCTCATGTTCGAACTGCTGACCGGGTCGCCGCCCTTCACGGGCTCGGATCCTATGAAGACGTACAACAAAATCCTGAAGGGCATCGATGCGGTCGAGTTCCCGCGCTGCATCACGCGCAACGCCGCTAATCTGATCAAGAAACTCTGCCGCGACAACCCTGCGGAGCGGCTCGGCTATCAACGAGGCGGCATAACTGAGATACAGAAGCACAAATGGTTCGATGGCTTTAACTGGGAAGGCCTAGCGCAACGTTCTCTAGAGCCACCTATTGTACCGACCGTAAATTCGGCCATAGACACGCACAACTTCGACCAATACCCGGCAGATGCAGACGAACCTCCCCCCGACGATCTCTCCGGTTGGGATGCGAACTTTTAA

Protein

MKIKHYPGKAVMEDPWLSLGDRTMDLVYAANWVGAKNLNKCNSNDDQSSSKCNSISRSKSCRDVGRSEENEYSQKKYSQEDSGCYFDVPNENISQLAKYQQNIEEKARTSDNYIAQNKLKHSYSFKDMPNGYKPSTLRRVKRRNFTEWDIEAFGSNSKQPPVPPQRKDSLKYAHRQRKVDSKKNYYPLPDPGPVPPDPSSESYYEYYSRVSQQNNDTDSDKLKQIQKSGKNDRNSPNEYPKQNGNTVYKIIHSMATLDLNPMKVRNGKQTLELDSEPEDLGLYMRPIKQSLSTCDQLPNHTTQPANERNGRIEDAKPSFRSKSLRVKSEGRVPLRAYLDTVQHNNAQYNGVTVTQPKRNLSPSEQLTLMQYEMFNGSKNQLAPPISNGFHAVDPSKESDYRTINSVTKQIKPDKYGKLYNTVRVKSDDRYERYNDITKFAPPKDHINEERATNGNGVFTRSAKSSSSGSDSDFSIPRPKLIVPVHTYGTRKRRTGNVQRDSTATEASLDAGIVLDVTRLEDSSHKFKKNEESEGRVEVSRENKYLSTMAPGKVFGELAILYNCKRTATIKAATDCRLWAIERQCFQTIMMRTGLIRQAEYTDFLKSVPIFKNFPEDTLIKISDVLEETHYQNGDYIIRQGARGDTFFIISKGQVKVTQKLPNSNDEKFIRTLTKGDFFGEKALQGDDLRTANIVCDSPDGTTCLVIDRETFNQLISTLDEIRTKYKDLGDDRQRLNEEFANLRLSDLRIIATLGIGGFGRVELVQIQGDSSRSFALKQMKKAQIVETRQQQHIMSEKEIMSEMNCEFIVKLYKTFKDRKYLYMLMETCLGGELWTILRDRGQFDDATTRFYTACVVEAFHYLHSRNIIYRDLKPENLLLDSKGYVKLVDFGFSKKLQASRKTWTFCGTPEYVAPEVIMNRGHDISADYWSLGVLMFELLTGSPPFTGSDPMKTYNKILKGIDAVEFPRCITRNAANLIKKLCRDNPAERLGYQRGGITEIQKHKWFDGFNWEGLAQRSLEPPIVPTVNSAIDTHNFDQYPADADEPPPDDLSGWDANF

Uniprot

A0A2H1W9X7 A0A194R8B7 A0A194QK34 A0A212EK19 A0A0L7LDG8

Pubmed

26354079 22118469 26227816

EMBL

ODYU01007254 SOQ49868.1 KQ460597 KPJ13887.1 KQ458756 KPJ05270.1 + More
AGBW02014320 OWR41862.1 JTDY01001548 KOB73568.1

Proteomes

UP000053240 UP000053268 UP000007151 UP000037510

Pfam

PF00027 cNMP_binding + More
PF00069 Pkinase

Interpro

IPR018490   cNMP-bd-like        + More
IPR011009   Kinase-like_dom_sf
IPR002374   cGMP_dep_kinase
IPR000595   cNMP-bd_dom
IPR000961   AGC-kinase_C
IPR000719   Prot_kinase_dom
IPR014710   RmlC-like_jellyroll
IPR008271   Ser/Thr_kinase_AS
IPR017441   Protein_kinase_ATP_BS
IPR018488   cNMP-bd_CS
IPR035014   STKc_cGK

SUPFAM

SSF51206 SSF51206 + More
SSF56112 SSF56112

Gene 3D

2.60.120.10

CDD

cd05572 STKc_cGK
cd00038 CAP_ED

ProteinModelPortal

A0A2H1W9X7 A0A194R8B7 A0A194QK34 A0A212EK19 A0A0L7LDG8

PDB

6C0T E-value=2.75497e-138, Score=1265

KEGG

692605 K07376 cGMP-dependent protein kinase 1 [EC:2.7.11.12] | (RefSeq) PKG-I, PKG-II; protein kinase, cGMP

GO

GO:0004692 GO:0005524 GO:0004674 GO:0006468 GO:0004672 GO:0004553 GO:0005634 GO:0006334 GO:0003779 GO:0016021

Length:

1058

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03042

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00002

outside

1 - 1058

Pi

220.025937

Theta

187.970815

Tajima's D

0.687367

CLR

0.194112

CSRT

0.575671216439178

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics