Gene

KWMTBOMO01241

Annotation

PREDICTED:_dual_3'?5'-cyclic-AMP_and_-GMP_phosphodiesterase_11_isoform_X5_[Bombyx_mori]

Location

Bomo_Chr3(+):6045545-6095595      View in EpiBrowser

Full name

Phosphodiesterase      

Location in the cell

Cytoplasmic   Reliability : 2.485

CDS

ATGGAGCAACTCGAAGAGATCAGGATTCCTTGGGGCAGCGGTATCGTGGGATACGTCGCCGAAAGTGGAGAGCCTGTCAACATACCTGATGCGTATAAGGATGAAAGGTTTAATCACGACATTGACCAGCAGACGGGCTACAAAACAAGATCTCTCCTCTGCATGCCGATCAAGGATACGAACGGAGAGGTTATCGGTGTTGCTCAGGTGATAAACAAACAGAGTGACGGCCCGTTCACTGTCAACGATGAGAAGGTGTTCGCATCGTACCTCCAGTTTTGCGGGATCGGTCTAAGGAACGCGCAGCTGTATGAACGATCGCAGTTGGAGGTGAAGAGAAATCAGGTTCTGCTGGACCTCGCCAGGATGGTGTTCGAGGAACAGAGCACAATCGAGCACATGGTGTTGAGGATATTGACGCACACGCAGAGTCTGATACGCTGTCAGCGAGTACAAGTACTTCTAGTCCATGAAGCATCGAAAGGTAGTTTCTCTCGAGTCTTCGATCTCGAAGCTGGCGACGATTCCGACCCCGGTTCTCCGCGAACTTCACCCTACGAGAGTCGATTTCCTATTAATATAGGTATTACGGGCTACGTGGCTACTACGGGAGAAGTAAGTCGATAA

Protein

MEQLEEIRIPWGSGIVGYVAESGEPVNIPDAYKDERFNHDIDQQTGYKTRSLLCMPIKDTNGEVIGVAQVINKQSDGPFTVNDEKVFASYLQFCGIGLRNAQLYERSQLEVKRNQVLLDLARMVFEEQSTIEHMVLRILTHTQSLIRCQRVQVLLVHEASKGSFSRVFDLEAGDDSDPGSPRTSPYESRFPINIGITGYVATTGEVSR

Cofactor

a divalent metal cation

Similarity

Belongs to the cyclic nucleotide phosphodiesterase family.

Uniprot

A0A212F5Z9   A0A2W1BX00   A0A2A4JRT0   A0A194R7T1   A0A2S2P4Y8   A0A2J7QW72   + More
A0A2J7QW65   A0A067R4U9   A0A1Y1MHF0   E0VX88   A0A1Y1ML52   A0A1B6E5Y0   A0A224XKF0   T1I6M0   A0A2M4BFZ4   A0A1B6F748   A0A069DZL1   A0A0V0G4R3   D6WXS4   A0A336LU68   J9JUG8   A0A2M4BDK6   A0A0P5K3N6   A0A151JB35   F4WDV0   A0A195CCX4   A0A182KN52   A0A0P4YYV2   A0A026W6P7   A0A154PAQ7   A0A0C9RZC1   A0A158NNF5   A0A2M4CL65   A0A2M4A2J7   A0A2M3Z0V7   A0A2M3Z0Y2   A0A2R7VRY1   A0A182V3S2   A0A2M4BBX5   A0A2M4A237   A0A2M4A1Y8   A0A2S2Q7X1   Q17CK8   A0A088AHD5   A0A1S4F7V7   A0A2M3Z0K9   A0A2M4BBA8   A0A2M4A1J8   A0A1Q3EX09   A0A1Q3EW90   Q7Q8G2   A0A2M3YZ59   A0A1S4GZJ6   B0X978   U4U9I9   N6U5Q9   A0A0P5S1S8   A0A0P5XXX8   A0A0P5W942   A0A2M3YYZ9   A0A182QHF9   A0A2M4CSB8   A0A2M4CII7   A0A182F366   A0A2C9GQ76   A0A1I8JU78   A0A0P5XWR5   A0A0P5B7A7   A0A182YN76   A0A2M4CSJ0   A0A0P5KHE0   A0A0P5YPI7   A0A2C9GQ13   A0A0P5P958   E2BX21   A0A0P6D837   A0A0C9RZA0   A0A0C9QUJ7   A0A0P5BZR3   A0A084W7Q4   A0A0P6GKA4   A0A0P4Z6E9   A0A0P5SMC0   A0A0P5TXR3   A0A0P5CS45   A0A0P4ZTY0   A0A195BFM4   A0A0P5P966   A0A0P5Z9W6   A0A0N8D681   A0A0P6HS55   A0A182J222   A0A0P5F6F2   A0A0P5SSI4   A0A0P6AJK3   A0A1L8DLW0   A0A0L7L0B8   T1JEP4   A0A1J1IHZ2   A0A1A9XDR6  

EC Number

3.1.4.-

Pubmed

22118469    28756777    26354079    24845553    28004739    20566863    + More
26334808    18362917    19820115    21719571    20966253    24508170    30249741    21347285    17510324    12364791    23537049    25244985    20798317    24438588    26227816   

EMBL

AGBW02010099    OWR49165.1    KZ149910    PZC78154.1    NWSH01000794    PCG74173.1    + More
KQ460597    KPJ13893.1    GGMR01011649    MBY24268.1    NEVH01009767    PNF32826.1    PNF32827.1    KK852699    KDR18162.1    GEZM01030960    JAV85134.1    DS235829    EEB17994.1    GEZM01030959    JAV85135.1    GEDC01003973    JAS33325.1    GFTR01007937    JAW08489.1    ACPB03010138    GGFJ01002806    MBW51947.1    GECZ01023784    JAS45985.1    GBGD01000450    JAC88439.1    GECL01003080    JAP03044.1    KQ971362    EFA07940.2    UFQT01000114    SSX20233.1    ABLF02040230    GGFJ01001999    MBW51140.1    GDIQ01191437    JAK60288.1    KQ979181    KYN22352.1    GL888094    EGI67624.1    KQ977935    KYM98570.1    GDIP01221620    JAJ01782.1    KK107373    QOIP01000004    EZA51643.1    RLU23841.1    KQ434860    KZC08932.1    GBYB01013471    JAG83238.1    ADTU01021376    ADTU01021377    ADTU01021378    ADTU01021379    ADTU01021380    ADTU01021381    ADTU01021382    ADTU01021383    ADTU01021384    ADTU01021385    GGFL01001480    MBW65658.1    GGFK01001733    MBW35054.1    GGFM01001416    MBW22167.1    GGFM01001422    MBW22173.1    KK854049    PTY10277.1    GGFJ01001405    MBW50546.1    GGFK01001490    MBW34811.1    GGFK01001482    MBW34803.1    GGMS01004640    MBY73843.1    CH477307    EAT44089.1    GGFM01001316    MBW22067.1    GGFJ01001169    MBW50310.1    GGFK01001365    MBW34686.1    GFDL01015196    JAV19849.1    GFDL01015471    JAV19574.1    AAAB01008944    EAA10146.3    GGFM01000796    MBW21547.1    DS232522    EDS43010.1    KB632186    ERL89722.1    APGK01039019    APGK01039020    APGK01039021    APGK01039022    APGK01039023    KB740966    ENN76950.1    GDIQ01098133    JAL53593.1    GDIP01067630    JAM36085.1    GDIP01089441    JAM14274.1    GGFM01000734    MBW21485.1    AXCN02002079    GGFL01003987    MBW68165.1    GGFL01000978    MBW65156.1    APCN01000703    APCN01000704    GDIP01066136    JAM37579.1    GDIP01188469    JAJ34933.1    GGFL01003963    MBW68141.1    GDIQ01184046    JAK67679.1    GDIP01054981    JAM48734.1    GDIQ01131933    JAL19793.1    GL451202    EFN79740.1    GDIQ01081387    JAN13350.1    GBYB01013436    JAG83203.1    GBYB01004307    JAG74074.1    GDIP01177644    JAJ45758.1    ATLV01021272    KE525315    KFB46248.1    GDIQ01034299    JAN60438.1    GDIP01221618    JAJ01784.1    GDIP01137973    JAL65741.1    GDIP01137974    JAL65740.1    GDIP01166518    JAJ56884.1    GDIP01221619    JAJ01783.1    KQ976502    KYM82982.1    GDIQ01131932    JAL19794.1    GDIP01047091    JAM56624.1    GDIP01064799    LRGB01000024    JAM38916.1    KZS21389.1    GDIQ01016151    JAN78586.1    GDIP01151173    JAJ72229.1    GDIP01141273    JAL62441.1    GDIP01029648    JAM74067.1    GFDF01006727    JAV07357.1    JTDY01003980    KOB68751.1    JH432127    CVRI01000054    CRK99879.1   

Proteomes

UP000007151    UP000218220    UP000053240    UP000235965    UP000027135    UP000009046    + More
UP000015103    UP000007266    UP000007819    UP000078492    UP000007755    UP000078542    UP000075882    UP000053097    UP000279307    UP000076502    UP000005205    UP000075903    UP000008820    UP000005203    UP000007062    UP000002320    UP000030742    UP000019118    UP000075886    UP000069272    UP000075840    UP000075900    UP000076408    UP000008237    UP000030765    UP000078540    UP000076858    UP000075880    UP000037510    UP000183832    UP000092443   

Pfam

PF01590   GAF        + More
PF00233   PDEase_I

Interpro

IPR029016   GAF-like_dom_sf        + More
IPR003018   GAF       
IPR003607   HD/PDEase_dom       
IPR036971   PDEase_catalytic_dom_sf       
IPR002073   PDEase_catalytic_dom       
IPR023088   PDEase       
IPR023174   PDEase_CS       

Gene 3D

3.30.450.40     1.10.1300.10    

CDD

cd00077  HDc

ProteinModelPortal

A0A212F5Z9   A0A2W1BX00   A0A2A4JRT0   A0A194R7T1   A0A2S2P4Y8   A0A2J7QW72   + More
A0A2J7QW65   A0A067R4U9   A0A1Y1MHF0   E0VX88   A0A1Y1ML52   A0A1B6E5Y0   A0A224XKF0   T1I6M0   A0A2M4BFZ4   A0A1B6F748   A0A069DZL1   A0A0V0G4R3   D6WXS4   A0A336LU68   J9JUG8   A0A2M4BDK6   A0A0P5K3N6   A0A151JB35   F4WDV0   A0A195CCX4   A0A182KN52   A0A0P4YYV2   A0A026W6P7   A0A154PAQ7   A0A0C9RZC1   A0A158NNF5   A0A2M4CL65   A0A2M4A2J7   A0A2M3Z0V7   A0A2M3Z0Y2   A0A2R7VRY1   A0A182V3S2   A0A2M4BBX5   A0A2M4A237   A0A2M4A1Y8   A0A2S2Q7X1   Q17CK8   A0A088AHD5   A0A1S4F7V7   A0A2M3Z0K9   A0A2M4BBA8   A0A2M4A1J8   A0A1Q3EX09   A0A1Q3EW90   Q7Q8G2   A0A2M3YZ59   A0A1S4GZJ6   B0X978   U4U9I9   N6U5Q9   A0A0P5S1S8   A0A0P5XXX8   A0A0P5W942   A0A2M3YYZ9   A0A182QHF9   A0A2M4CSB8   A0A2M4CII7   A0A182F366   A0A2C9GQ76   A0A1I8JU78   A0A0P5XWR5   A0A0P5B7A7   A0A182YN76   A0A2M4CSJ0   A0A0P5KHE0   A0A0P5YPI7   A0A2C9GQ13   A0A0P5P958   E2BX21   A0A0P6D837   A0A0C9RZA0   A0A0C9QUJ7   A0A0P5BZR3   A0A084W7Q4   A0A0P6GKA4   A0A0P4Z6E9   A0A0P5SMC0   A0A0P5TXR3   A0A0P5CS45   A0A0P4ZTY0   A0A195BFM4   A0A0P5P966   A0A0P5Z9W6   A0A0N8D681   A0A0P6HS55   A0A182J222   A0A0P5F6F2   A0A0P5SSI4   A0A0P6AJK3   A0A1L8DLW0   A0A0L7L0B8   T1JEP4   A0A1J1IHZ2   A0A1A9XDR6  

PDB

3BJC     E-value=6.51856e-49,     Score=486

KEGG

101738997    K13298 dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 [EC:3.1.4.17 3.1.4.35] | (RefSeq) dual 3'

GO

GO:0004114   GO:0007165   GO:0046872   GO:0016021   GO:0004115   GO:0047555   GO:0005515   GO:0007186   GO:0005507   GO:0006000   GO:0004553   GO:0005634   GO:0006334   GO:0003779  

Length:

208

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00709000000000001

Exp number, first 60 AAs:

0.00182

Total prob of N-in:

0.04068

outside

1  -  208

 

 

Pi

265.008296

Theta

191.736666

Tajima's D

1.36648

CLR

0.455683

CSRT

0.75681215939203

Interpretation

Uncertain