Gene

KWMTBOMO01239

Annotation

reverse_transcriptase_[Papilio_xuthus]

Location

Bomo_Chr3(-):5997876-5999954      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.009

CDS

ATGGCCATAAGGGCCCTGCGCGTGGCTATCGGGGAGGCGAAGGAGGCTGCTTGGAACGACCTACTAGCTTCGCTCGACTGTGATCCGTGGGGGCGGCCCTACAGGCTGGCGCGCAATGTGCTCCGCCCTTGGGCCCCCCCCGCAACCAGCACCCTGCCGCCGGAGACATTGCAGCGGGTAGTCGGGGGTCTGTTTCCGGATTTTACCGGGACGGCCTTCGTCCCCCCTGTGATGACGACGATGCGGGTTGCTGATGGCGGGGAGCCTGCGGACGTTTCGCAGGCGGAGTTTGAATCGGCTGTGCAGAGGATGCGGGCGAAGCGCACGGCTCCCGGTCCCGATGGGATCTCGTCCCGAGCGTGGGCGCTCGCCTTGACGGGCGATGGTTTGGGGCCTGCCCTCCGAAGGCTGTTCAGCCGGTGCCTCCGTGAGGGCAGGTTCCCAGAGCCATGGAGGACTGGTCGGCTCGTCCTTATTCCTAAGGAGGGTCGGCCACGTGACGAACCGAACGGGTACCGCCCAATCGTCGTGCTGGACGAGGCCGGTAAGCTCTTCGAGCGCGTCATCGCTAATCGCCTTGTCCAGCACCTGGAAAACGTTGGGCCTGATTTGGCTCCTAACCAATACGGTTTCCGGAGGGGTCGCTCGACCGTGGACGCGGTCTTGCGTGTCCGCCATCTCTCCGATTGTGCGTGCTCCGAGGGGGGCGTGTTGTTGGCTGTGTCGATTGACATCGCCAACGCCTTCAACACGATCCCCTGGAGCACGATCGTGGAATCACTTCGGTTTCACCGCATCCCCAATAGTCTCCGCACCCTGATAGAGGACTACCTCTCAGGGCGGAGCGTGATTTTCCCCGAGAGAAGAGGATGGGGACGAAAAACGGTGTCGTGCGGGGTACCACAGGGGTCGGTATTGGGACCACTCCTGTGGGACATCGGTTTCGACTGGGTCCTCCGCGGTGCTGGCCTGCGTGGCGTCGACGTGGTGTGCTATGCCGACGACACGTTGGTGACGGCTCGCGGAGCTGACTACAGGACCGCAGCGATCATTGCAACGGCGGCGGTCTCCACCGTCGTTAGCCGCATTCGGAGACTAGGTCTTGAGGTGGCCCTCCACAAGTCTGAGGCCGTATGCTTTCACCCGGTTCGGAGAGGACCCCCTCCGGGCGCGACGCTCATAGTCGGTGGAGTATCGATCGCTGTCCAGCCGAAGCTCAAATATTTGGGCATCGTGCTGGACAGTCGATGGCGCTTCGACCACCATTTTGGTGAGTTGATTCCGAGGCTACTGGGCATGGCAGGTGCGTTAGTCCGTCTTCTGCCCAACGTTGGTGGTTGCAGCGTCGGTGTCCGACGCCTGTACCTGGGGGTCGTGCGCAGTATGGCCTTGTATGGCGCTCCCGTGTGGTCGCCCACACTCTCCGCACGCAATGCGGCGCTGCTGCTCCGAGCTCAGCGAGCGCTCGCGGTGAGGGTCATCAGGGGGTACCGTACGATCTCCCGAGAGGTCGCCTGCGCCCTCGCTGGTTCCCTTCCTTGGGATCTCGAGGCCGAGGTATTGGCTACGGTATACCGGCGCAGGACACAGTCCCTGGGTCGGGGACGGACACCCGGCCTGTCGGCTGTCAGTCGGTGGAGGCGTGCTGCGCGTCATCTGGCGTACGCTAAATGGAGGGAGCGGTTGCTGGAGGAACTTCATCAAACCTCAGCCACCCGCCGGCGCACTCTCGAGGCCCTGGTGCCCGTGCTGGAGACATGGTCAGATCGGCGACACGGCGTGCTCTCCTTCCACCTTACGCAGGTCCTCTCGGGCATGGCTGCTTCGGGAGGTACCTGTGGAGGGTTTGCAGGAGAGAGCCACATCCGGGTTGTCACCAGTGCGGGCATCCGGATGATGACGCTCAGCACGCACTCGAAGCGTGCCCGCGTTGGGAGCACCCGCGGCGAGATCTCATCGCGGTGCTGGGGAGGGACCTCTCCTTGCGGGCTGTCATTGCCCGCATGCTAG

Protein

MAIRALRVAIGEAKEAAWNDLLASLDCDPWGRPYRLARNVLRPWAPPATSTLPPETLQRVVGGLFPDFTGTAFVPPVMTTMRVADGGEPADVSQAEFESAVQRMRAKRTAPGPDGISSRAWALALTGDGLGPALRRLFSRCLREGRFPEPWRTGRLVLIPKEGRPRDEPNGYRPIVVLDEAGKLFERVIANRLVQHLENVGPDLAPNQYGFRRGRSTVDAVLRVRHLSDCACSEGGVLLAVSIDIANAFNTIPWSTIVESLRFHRIPNSLRTLIEDYLSGRSVIFPERRGWGRKTVSCGVPQGSVLGPLLWDIGFDWVLRGAGLRGVDVVCYADDTLVTARGADYRTAAIIATAAVSTVVSRIRRLGLEVALHKSEAVCFHPVRRGPPPGATLIVGGVSIAVQPKLKYLGIVLDSRWRFDHHFGELIPRLLGMAGALVRLLPNVGGCSVGVRRLYLGVVRSMALYGAPVWSPTLSARNAALLLRAQRALAVRVIRGYRTISREVACALAGSLPWDLEAEVLATVYRRRTQSLGRGRTPGLSAVSRWRRAARHLAYAKWRERLLEELHQTSATRRRTLEALVPVLETWSDRRHGVLSFHLTQVLSGMAASGGTCGGFAGESHIRVVTSAGIRMMTLSTHSKRARVGSTRGEISSRCWGGTSPCGLSLPAC

Similarity

Belongs to the AB hydrolase superfamily. Lipase family.

Uniprot

O01419   Q8MY31   Q8MY33   Q8MY35   Q8MY27   Q868Q4   + More
A0A2W1C3J5   Q8MY25   A0A0J7N1D9   A0A194R5D3   A0A0J7KF37   A0A0J7KYD2   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KQK3   A0A0J7KIM6   A0A0J7K3R6   A0A0J7KLH8   A0A0J7KJH4   A0A0J7NAV8   A0A0J7K3F1   A0A0J7KPR0   A0A0J7MWN5   A0A0J7KF40   A0A0J7KRB8   A0A0J7KSR8   A0A034WR48   J9LJ80   A0A2S2N8I2   A0A0J7KL06   A0A0J7MY17   J9LVU7   A0A0J7KWU5   X1WJY4   A0A0J7KLT9   A0A0J7KPZ3   A0A0J7KQY4   A0A0J7NMN5   A0A2S2PEZ7   A0A0J7NJI3   A0A0J7MYL9   A0A0J7NFZ0   A0A2S2P488   J9KUM6   A0A2H8TIE5   A0A1W7R6C5   A0A0J7N0R3   A0A142LX45   A0A2S2NQQ6   T1DG89   A0A0J7KFH2   A0A0J7KF91   A0A0J7KCE1   J9KJG8   F7IYU8   T1DG59   A0A2M4CKQ7   A0A139W940   T1DCM0   A0A0J7KCD9   J9KV04   A0A023EW96   A0A3L8D4C5   A0A1W7R6I9   A0A0J7N7S8   J9KT70   W8ADE4   A0A2H8TR36   A0A139W939   K7JP45   A0A0K8TR60   A0A142LX37   J9JWJ3   W8ANK7   A0A139W9B3   A0A2M4BC28   A0A2M4BDI3   A0A2M4BBV9   A0A2M4ADW9   A0A2M4CJ33   A0A2M4BC01   A0A139W9J0   J9KNS1   A0A2M4CS98   J9LM37   J9L6Z9   A0A0J7KIS5   A0A0J7KMG5   A0A2S2PBP5  

Pubmed

9092665    12644555    28756777    26354079    25348373    25527032    + More
24330624    18362917    19820115    24945155    30249741    24495485    20075255    26369729   

EMBL

D85594    BAA19776.1    AB078931    BAC06456.1    AB078930    BAC06454.1    + More
AB078929    BAC06452.1    AB078935    BAC06462.1    AB090825    BAC57926.1    KZ149896    PZC78733.1    AB078936    BAC06464.1    LBMM01012027    KMQ86470.1    KQ460685    KPJ12887.1    LBMM01008448    KMQ88867.1    LBMM01002052    KMQ95336.1    LBMM01006671    KMQ90407.1    LBMM01006954    KMQ90166.1    LBMM01004272    KMQ92618.1    LBMM01007036    KMQ90099.1    LBMM01015018    KMQ84954.1    LBMM01005948    KMQ91066.1    LBMM01006657    KMQ90417.1    LBMM01007425    KMQ89740.1    LBMM01015025    KMQ84953.1    LBMM01004634    KMQ92224.1    LBMM01015285    KMQ84870.1    LBMM01008422    KMQ88894.1    LBMM01003988    KMQ92922.1    LBMM01003575    KMQ93366.1    GAKP01002292    JAC56660.1    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    GGMR01000779    MBY13398.1    LBMM01006063    KMQ90967.1    LBMM01014122    KMQ85315.1    ABLF02034925    LBMM01002480    KMQ94776.1    ABLF02011238    LBMM01005733    KMQ91252.1    LBMM01004505    KMQ92346.1    LBMM01004262    KMQ92649.1    LBMM01003245    KMQ93755.1    GGMR01015159    MBY27778.1    LBMM01004261    KMQ92650.1    LBMM01013668    KMQ85535.1    LBMM01005474    KMQ91485.1    GGMR01011682    MBY24301.1    ABLF02041557    GFXV01002090    MBW13895.1    GEHC01000964    JAV46681.1    LBMM01012412    KMQ86235.1    KU543683    AMS38371.1    GGMR01006838    MBY19457.1    GALA01001776    JAA93076.1    LBMM01008278    KMQ89009.1    LBMM01008445    KMQ88871.1    LBMM01009535    KMQ88053.1    ABLF02041886    AB593321    BAK38639.1    GALA01000302    JAA94550.1    GGFL01001583    MBW65761.1    KQ972691    KXZ75806.1    GALA01001777    JAA93075.1    LBMM01009610    KMQ87992.1    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637    GAPW01000192    JAC13406.1    QOIP01000014    RLU15074.1    GEHC01000915    JAV46730.1    LBMM01008682    KMQ88705.1    ABLF02010223    GAMC01020519    GAMC01020515    JAB86040.1    GFXV01003903    MBW15708.1    KXZ75807.1    AAZX01001144    GDAI01000741    JAI16862.1    KU543679    AMS38363.1    ABLF02013358    ABLF02013361    ABLF02054869    GAMC01020517    JAB86038.1    KQ972544    KXZ75869.1    GGFJ01001439    MBW50580.1    GGFJ01001727    MBW50868.1    GGFJ01001369    MBW50510.1    GGFK01005660    MBW38981.1    GGFL01001192    MBW65370.1    GGFJ01001370    MBW50511.1    KQ972226    KYB24577.1    ABLF02018808    GGFL01004044    MBW68222.1    ABLF02014650    ABLF02021100    LBMM01006977    KMQ90149.1    LBMM01005465    KMQ91492.1    GGMR01014195    MBY26814.1   

Proteomes

UP000036403    UP000053240    UP000007819    UP000007266    UP000279307    UP000002358    + More

PRIDE

O01419    Q868Q4   

Pfam

PF03372   Exo_endo_phos        + More
PF00078   RVT_1
PF14529   Exo_endo_phos_2
PF01553   Acyltransferase
PF00098   zf-CCHC
PF00151   Lipase
PF12017   Tnp_P_element

Interpro

IPR000477   RT_dom        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR029058   AB_hydrolase       
IPR013818   Lipase/vitellogenin       
IPR000734   TAG_lipase       
IPR000663   Natr_peptide       
IPR021896   Transposase_37       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53474   SSF53474       

Gene 3D

3.60.10.10     3.40.50.1820    

ProteinModelPortal

O01419   Q8MY31   Q8MY33   Q8MY35   Q8MY27   Q868Q4   + More
A0A2W1C3J5   Q8MY25   A0A0J7N1D9   A0A194R5D3   A0A0J7KF37   A0A0J7KYD2   A0A0J7KJG6   A0A0J7KIY5   A0A0J7KQK3   A0A0J7KIM6   A0A0J7K3R6   A0A0J7KLH8   A0A0J7KJH4   A0A0J7NAV8   A0A0J7K3F1   A0A0J7KPR0   A0A0J7MWN5   A0A0J7KF40   A0A0J7KRB8   A0A0J7KSR8   A0A034WR48   J9LJ80   A0A2S2N8I2   A0A0J7KL06   A0A0J7MY17   J9LVU7   A0A0J7KWU5   X1WJY4   A0A0J7KLT9   A0A0J7KPZ3   A0A0J7KQY4   A0A0J7NMN5   A0A2S2PEZ7   A0A0J7NJI3   A0A0J7MYL9   A0A0J7NFZ0   A0A2S2P488   J9KUM6   A0A2H8TIE5   A0A1W7R6C5   A0A0J7N0R3   A0A142LX45   A0A2S2NQQ6   T1DG89   A0A0J7KFH2   A0A0J7KF91   A0A0J7KCE1   J9KJG8   F7IYU8   T1DG59   A0A2M4CKQ7   A0A139W940   T1DCM0   A0A0J7KCD9   J9KV04   A0A023EW96   A0A3L8D4C5   A0A1W7R6I9   A0A0J7N7S8   J9KT70   W8ADE4   A0A2H8TR36   A0A139W939   K7JP45   A0A0K8TR60   A0A142LX37   J9JWJ3   W8ANK7   A0A139W9B3   A0A2M4BC28   A0A2M4BDI3   A0A2M4BBV9   A0A2M4ADW9   A0A2M4CJ33   A0A2M4BC01   A0A139W9J0   J9KNS1   A0A2M4CS98   J9LM37   J9L6Z9   A0A0J7KIS5   A0A0J7KMG5   A0A2S2PBP5  

PDB

6AR3     E-value=2.21628e-05,     Score=117

KEGG

101739176    no KO assigned | (RefSeq) uncharacterized LOC101739176

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0005576   GO:0004519   GO:0005179   GO:0004803   GO:0006313  

PANTHER

PTHR11610  

Subcellular location

Secreted  

Length:

669

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.25986

Exp number, first 60 AAs:

0.00127

Total prob of N-in:

0.00390

outside

1  -  669

 

 

Pi

0.012189

Theta

0.162652

Tajima's D

-1.467837

CLR

46.210669

CSRT

0.00104994750262487

Interpretation

Uncertain