SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01237
Pre Gene Modal
BGIBMGA009032
Annotation
PREDICTED:_protein_MIS12_homolog_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 3.108
 

Sequence

CDS
ATGATCAGAACACTTCCATGGAGCGGGGGAACGGATGAGGAATATGAAACACAGCTCTTTAGTTTTGGAGCACAAAGATTGAAAATTGCAACACGACAAATGATAGAACAGAAAATAACATTAGGAATAAAGGATATGGAGGCTTACTTGCGCGAGTCCTTAGATTTGAATGAAACTGATAAATCAACATTAACGAAAGCGTGTGATAAATTGGTGCGCCTTTATTGTGAAAGGGCTAGTCCTTCATTAGAAGTAATAGATTGTGAAATTGAACGAATTTTAAAAGTGCCTGAAAATGTTCTCTTACCGGGAGATGAATGTCAGGTCGAACAAATGACAGACGCAAATTATGCACAATTAAAAGACGAAGTTGCATTGCTTAGAAAACGTGTAGAAAGAGGAGCATTAATGGAAGCTTTATTAACTGCAGAAGAAGAGGAATTATGTACTGTGGAAAAGGTTTGTGAATCAGCAAAAAAAGACATGGAAGCATTGGATCTTGTATTTAAAAATGCGGATAATAGTGAGTCGTTGAAACAAATTCAAAATGAAACACGATTTCTGTGTGCAAGTACATCATTTATGAAAGAAAACGATAATAATATTTTTAAATGA
Protein
MIRTLPWSGGTDEEYETQLFSFGAQRLKIATRQMIEQKITLGIKDMEAYLRESLDLNETDKSTLTKACDKLVRLYCERASPSLEVIDCEIERILKVPENVLLPGDECQVEQMTDANYAQLKDEVALLRKRVERGALMEALLTAEEEELCTVEKVCESAKKDMEALDLVFKNADNSESLKQIQNETRFLCASTSFMKENDNNIFK

Summary

Pfam
PF05859   Mis12
Interpro
IPR008685   Centromere_Mis12       

Ontologies

Topology

Length:
204
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04091
outside
1  -  204
 
 

Population Genetic Test Statistics

Pi
249.589758
Theta
187.943919
Tajima's D
1.032177
CLR
0
CSRT
0.670016499175041
Interpretation
Uncertain
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