SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01236
Pre Gene Modal
BGIBMGA008849
Annotation
PREDICTED:_probable_G-protein_coupled_receptor_CG31760_[Amyelois_transitella]
Full name
Phosphodiesterase       + More
Probable G-protein coupled receptor CG31760      
Location in the cell
PlasmaMembrane   Reliability : 4.03
 

Sequence

CDS
ATGGGGGGGCCGCGGCGCATGTCAAGTGCGCTGCTGCTGCCCTTCGCGTTGCTGTCGCTACCGCACACGAACGCCGCAAATGCAACCTCCTATCGGGAAGAGGTAGAATCATCATTGCGACTTGTGCACGCGGTGGCTACAGGAGCGACCGGCGCGCTTTGCGTGACACACCGCTACGGTCGTCTACGAGCACCGCTACACACGACACGATGGGACACGGCGCGGGCCCGAGCCGACTTGGCTGCCAATTTATTGCATCAGCTCGGATTGGAAACGGCTGAAGTACTCATGGCGGTTTCAAAAGGCTTAGTTTTGGGAGCCAGCCCGACCGAACGTGCTGTTGGATCGAGAGCATTAGCTCTGAGAAGCGATGGTGTTGTCAACAGTGCGGTCGCTTGGGAAAGATATGGAACCGCTGAGCCTGTTGCAGTTGTTTCACCGCAGTTGGAGAAGCCTCCGGACCCGGAATATCCATGGTATGTCTCAGCACACGAGAGCGAATCTCTTCGCTCGCCAAAGTTCATGCCTTCTTCTCCCGGTGCCACAATGGAAGGATGGTGGACTTATCCATACTACAGTTGCGGGGCGAAACGGTGGCTCTTATCTTATACCGTACCCGTCTCCACTATACGAGGGTTAAAAGGTATTGTTTCACTGGACATAGACATATCCAATTTGGAAATAAACCAGTGCGAGACAGATATATTTGATGAAAATGATAACCAAATATATTCCTTTCACGGAACTCATAAATGTCCCAATGAAACTACATACTGCGAATACAAACAGAGTCGTGAAATGAACGTTCGTCACACTGGTTGGGCGAGAGGATCATATGTTTGTAGATGCAGACCTGGCTTCTATTCAATTCATCATCCCGAAGGGTACAATGGATCTGTCATTGAAGTCGCTTACCAAGAATACGAAGAGAACGGATTAGAGAACTGGAGTGCACCATACGAATGCCTGAAATGTCAACCAGGATGTATTACATGCCGAGGCCCCGAACCATGCCTTGCCACCTACAACTGGCCATTTCGGATATCTTTGCTAGTAATATCAATGAGCTGTGTAGTGATGACTGTATGTCTTACAATATACACACGTCACCATCGCCGAGTAAAAGTGTTCCGAGTAGCCAGTCCTGTTTTTCTCTCAATTACTCTTCTTGGATGTGCCATTATGTACATGGAGATGGCTGCTATTTTCCCAGTTCTTGATAGGTACTCCTGTATTGCAACAAAATGGACTCGACACATGGGATTTTGTATTACATACACAGCACTTCTCATGAAGACTTGGAGAGTATCCCTCACATATCGGGTGAAATCAGCACACAAGTTGAAATTAACGGATAAACAATTATTGCAATGGATGGCTCCTATATTACTTATCATGTTGGTATACCTTTGTACATGGACATTGTCTTCACCGCCTGATGCCGAAGTCATAATGGACAATAAAGGATTGAAATTCAAGCAGTGTGTATATAATTGGTGGGATCATAGTTTAGCTATAGGTGAAATCCTTTTCCTGCTATGGGGTGTTCGTGTTTGTTACCGTGTACGTCACGCGGAGAGCTTGTACAATGAAGCTAAGCTAATCTCCTTTGCAATCTACAACATATTCACTGTAAATTCCTTGATGATTGCCTTCCATTTGCTGATATTACCACAAGCCGGTCCTGACATAAAATATTTGCTGGGATTCATAAGAACGCAACTGTCGACTTCGACTACGGTTTTGCTCGTATTTCTACCAAAAGTTTTACGCGTAGTTCGTGGTACGGGGGATACGTGGGATAGCAGGGCTCGCGCCCGAGGTGCTCCGGCTTCCTCATCGCTAAATGGCATCGGGCTGGTGCCAGACGAACCCCCGGATTTGTACCAGGAGAATGAAGAACTTAAGGAGGAAGTACAGAAACTGGCAGCCCAAATTGAATACATGAAAATAGTACAAATGGAGAAGAACAATCGGCATCTGAGACCGCGGCCCGGCGGCTACTTCACGTCCAATACCCAAGCGCCGCAGAGCCCCATGCACCCAAAGACCGTTTCTCAGGACAGTACAGAATACCCGGGGCCGGTGTGA
Protein
MGGPRRMSSALLLPFALLSLPHTNAANATSYREEVESSLRLVHAVATGATGALCVTHRYGRLRAPLHTTRWDTARARADLAANLLHQLGLETAEVLMAVSKGLVLGASPTERAVGSRALALRSDGVVNSAVAWERYGTAEPVAVVSPQLEKPPDPEYPWYVSAHESESLRSPKFMPSSPGATMEGWWTYPYYSCGAKRWLLSYTVPVSTIRGLKGIVSLDIDISNLEINQCETDIFDENDNQIYSFHGTHKCPNETTYCEYKQSREMNVRHTGWARGSYVCRCRPGFYSIHHPEGYNGSVIEVAYQEYEENGLENWSAPYECLKCQPGCITCRGPEPCLATYNWPFRISLLVISMSCVVMTVCLTIYTRHHRRVKVFRVASPVFLSITLLGCAIMYMEMAAIFPVLDRYSCIATKWTRHMGFCITYTALLMKTWRVSLTYRVKSAHKLKLTDKQLLQWMAPILLIMLVYLCTWTLSSPPDAEVIMDNKGLKFKQCVYNWWDHSLAIGEILFLLWGVRVCYRVRHAESLYNEAKLISFAIYNIFTVNSLMIAFHLLILPQAGPDIKYLLGFIRTQLSTSTTVLLVFLPKVLRVVRGTGDTWDSRARARGAPASSSLNGIGLVPDEPPDLYQENEELKEEVQKLAAQIEYMKIVQMEKNNRHLRPRPGGYFTSNTQAPQSPMHPKTVSQDSTEYPGPV

Summary

Cofactor
a divalent metal cation
Miscellaneous
This protein is translated by readthrough of a stop codon. Readthrough of the terminator codon TAG occurs between the codons for Val-875 and Arg-877. There is currently no sequence that provides the identity of residue 876.
Similarity
Belongs to the cyclic nucleotide phosphodiesterase family.
Belongs to the G-protein coupled receptor 3 family.
Belongs to the UDP-glycosyltransferase family.
Keywords
Alternative splicing   Cell membrane   Complete proteome   G-protein coupled receptor   Glycoprotein   Membrane   Phosphoprotein   Receptor   Reference proteome   Transducer   Transmembrane   Transmembrane helix  
Feature
chain  Probable G-protein coupled receptor CG31760
splice variant  In isoform B.
EC Number
3.1.4.-
EMBL
BABH01012976    BABH01012977    KZ149910    PZC78144.1    AGBW02012537    OWR44871.1    + More
KQ460317    KPJ16009.1    KQ458756    KPJ05279.1    AXCN02002080    UFQT01000114    SSX20230.1    AAAB01008944    SSX20231.1    SSX20232.1    GDHF01032587    JAI19727.1    KQ977935    KYM98572.1    GAMC01012123    GAMC01012121    JAB94434.1    APCN01000704    APCN01000705    APCN01000706    KQ982730    KYQ51489.1    KQ971362    KYB25725.1    GL434441    EFN74935.1    CCAG010008329    JXJN01007542    JXJN01007543    AE014134    AY118394    CM000361    EDX04789.1    CM000157    EDW88167.2    CM002910    KMY89887.1    CH902620    EDV32143.2    KK107373    EZA51640.1    QOIP01000004    RLU23839.1    EAA10329.3    CH954177    EDV58814.2    JRES01001697    KNC20882.1    KQ414568    KOC71375.1    JR037064    AEY57558.1    CVRI01000001    CRK86175.1    CH940649    EDW63966.2    CH916368    EDW03332.1    OUUW01000004    SPP79222.1    GL451202    EFN79742.1    KZ288365    PBC26836.1    ACPB03010138    CH933807    EDW11081.2    JR037065    AEY57559.1    DS235829    EEB17993.1    KQ978771    KYN28519.1    GL887862    EGI69763.1    KQ976502    KYM82985.1    KQ435754    KOX76068.1    DS232456    EDS42039.1    ADTU01021353    ADTU01021354    ADTU01021355    ADTU01021356    ADTU01021357    ADTU01021358    ADTU01021359    CH379060    EAL33824.3    CH963857    KRF98472.1    ADMH02001597    ETN61912.1    JH431954    CH477307    EAT44087.2    NEVH01018411    PNF23332.1    GAKP01002726    JAC56226.1    GDIQ01052844    JAN41893.1    GDIP01043846    JAM59869.1    GDIQ01073786    JAN20951.1    GDIP01168621    JAJ54781.1    GDIP01246060    GDIP01038986    JAM64729.1    GDIP01254613    JAI68788.1    GDIP01012015    JAM91700.1    GDIP01169808    JAJ53594.1    GDIQ01022412    JAN72325.1    GDIQ01223482    JAK28243.1    GDIP01241315    JAI82086.1    GDIQ01225888    JAK25837.1    CAEY01000414    CAEY01000415   
Pfam
PF00003   7tm_3        + More
PF00233   PDEase_I
PF01590   GAF
PF12597   DUF3767
PF00941   FAD_binding_5
PF01799   Fer2_2
PF00201   UDPGT
PF02738   Ald_Xan_dh_C2
PF01315   Ald_Xan_dh_C
PF00111   Fer2
PF03450   CO_deh_flav_C
Interpro
IPR017978   GPCR_3_C        + More
IPR029016   GAF-like_dom_sf       
IPR002073   PDEase_catalytic_dom       
IPR036971   PDEase_catalytic_dom_sf       
IPR003607   HD/PDEase_dom       
IPR023174   PDEase_CS       
IPR023088   PDEase       
IPR003018   GAF       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR001041   2Fe-2S_ferredoxin-type       
IPR036010   2Fe-2S_ferredoxin-like_sf       
IPR022533   Cox20       
IPR036683   CO_DH_flav_C_dom_sf       
IPR002213   UDP_glucos_trans       
IPR035595   UDP_glycos_trans_CS       
IPR036856   Ald_Oxase/Xan_DH_a/b_sf       
IPR006058   2Fe2S_fd_BS       
IPR016166   FAD-bd_PCMH       
IPR002346   Mopterin_DH_FAD-bd       
IPR037165   AldOxase/xan_DH_Mopterin-bd_sf       
IPR000674   Ald_Oxase/Xan_DH_a/b       
IPR002888   2Fe-2S-bd       
IPR014307   Xanthine_DH_ssu       
IPR036884   2Fe-2S-bd_dom_sf       
IPR005107   CO_DH_flav_C       
IPR008274   AldOxase/xan_DH_Mopterin-bd       
IPR036318   FAD-bd_PCMH-like_sf       
IPR000337   GPCR_3       
SUPFAM
SSF57184   SSF57184        + More
SSF47741   SSF47741       
SSF55447   SSF55447       
SSF56176   SSF56176       
SSF56003   SSF56003       
SSF54292   SSF54292       
SSF54665   SSF54665       
Gene 3D

Ontologies

Topology

Subcellular location
Cell membrane  
SignalP
Position:   1 - 25,         Likelihood:  0.985641
 
 
Length:
696
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
146.06239
Exp number, first 60 AAs:
0.32184
Total prob of N-in:
0.01680
outside
1  -  343
TMhelix
344  -  366
inside
367  -  378
TMhelix
379  -  401
outside
402  -  415
TMhelix
416  -  438
inside
439  -  454
TMhelix
455  -  477
outside
478  -  498
TMhelix
499  -  521
inside
522  -  533
TMhelix
534  -  556
outside
557  -  570
TMhelix
571  -  593
inside
594  -  696
 
 

Population Genetic Test Statistics

Pi
245.381009
Theta
197.763151
Tajima's D
0.81964
CLR
0.04733
CSRT
0.608469576521174
Interpretation
Uncertain
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