Gene

KWMTBOMO01235  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009033

Annotation

Hydroxybutyrate_dehydrogenase_[Operophtera_brumata]

Location

Bomo_Chr3(-):5766284-5767277      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.842

CDS

ATGAGTTTCAAAGAAAAAGTGGTTGTTGTGACAGGATCTAGTTCTGGGATAGGAGCATCGATTGCTATACAGTTCGCAGCTGAAGGAGCTAAAGTGGTTATTGTTGGTAGAAATGAAGTGAAACTTAAAACAGTTTTCGAGCAATGCGAGAAACATGGAAACCAGACCTTGAGTGTCACAGCTGATATGAACAAGGACGAGGACATCAAGAGAATTGTAGATGAAACCATTAAGCGTTTCGGAAAAATTGATGTCTTAGTGAACAATGCTGGTATTGGGGCATCTGCAAGCATCCTAGCTGAGAATGCTTTGGAAATATTCGATAAGGTTATATCTACGAACCTCCGATCCGCCGTGTGTATAACAAACTTAGCTGCGCCCCATCTTGTGAAAACTAAAGGTAATATCATTAACATTTCTAGTATAGCAAGCTTGGGTGTGCTATCACCAAATAATTTTATTTACGGAGCATCAAAAGCCGGCTTGGATCACTTTACTAGATGCATAGCACTGGAATTAGCAGGAAAAGGAGTACGAGTCAATTCCGTGAACCCTGGACCTGTTAAAACAGATATAATATCTAATATGGGAGTATCAGAATCGTACCAAGAAAAGATTTGGAATATCATGAAGAAAGGAACGGCTCTTGACAGAATTGCTGAACCCGAGGAAATTGCTGATATTGTTTTGTTTTTAGCAAGTGACAAAGCTAGAAGTATTACGGGATCGATATATGTTTCTGATAATGGAGCCCTTTTGAAAGGTTTGATGCCTGCAGAATAA

Protein

MSFKEKVVVVTGSSSGIGASIAIQFAAEGAKVVIVGRNEVKLKTVFEQCEKHGNQTLSVTADMNKDEDIKRIVDETIKRFGKIDVLVNNAGIGASASILAENALEIFDKVISTNLRSAVCITNLAAPHLVKTKGNIINISSIASLGVLSPNNFIYGASKAGLDHFTRCIALELAGKGVRVNSVNPGPVKTDIISNMGVSESYQEKIWNIMKKGTALDRIAEPEEIADIVLFLASDKARSITGSIYVSDNGALLKGLMPAE

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JHN5   A0A2A4JIX4   A0A2H1WFW5   A0A2A4ITT1   A0A0L7LH86   A0A2A4JH23   + More
A0A2A4JIH1   A0A2W1BUV9   A0A0L7KZ86   A0A2H1WS78   A0A2A4JHX2   A0A2H1WUW2   A0A2H1WTS2   A0A0L7LK01   A0A2W1BZ77   A0A2A4JK27   A0A2H1WMX1   A0A2W1BSW8   A0A212ETR6   D2SNW1   A0A0N1IIA2   A0A0N0PB24   A0A2H1VC89   I4DS66   A0A0N1PFW5   A0A0N0PAS3   A0A194PKC3   A0A2H1X3K0   A0A194PJG5   A0A194PID7   A0A2A4JHN9   H9JUQ7   H9JUQ8   A0A0N1IGV7   H9JUE7   A0A0N0PC39   H6AGY1   A0A194PR87   A0A212EJ88   A0A0L7LIU8   A0A212EJ84   A0A0N1IFH9   A0A194PIN0   A0A194PXT8   A0A194PT74   I4DQC6   Q9NBB5   A0A2H1VBR9   H9JUK7   A0A212EP45   A0A2H1X3T6   A0A2A4IZG3   A0A1Q3G5L3   A0A2H1W6Q5   A0A2H1VAH5   A0A1Q3G5H6   A0A2A4J612   A0A2A4JIE3   A0A2H1V3T7   H9JUE8   A0A0L7KPN2   A0A0L7KSS2   H9JUK8   A0A0N0PDP5   A0A212F250   A0A194PHJ7   I4DPW2   A0A0N1IDX2   A0A2H1WPX2   A0A0L7KLX4   A0A194Q286   A0A1Q3G5G6   A0A0L7KSR6   H9JUH9   A0A2A4K610   A0A2A4J0E8   A0A212EP29   A0A2H1VHE2   H9JG62   A0A2A4IZU2   A0A2A4J134   A0A0N0PDE1   A0A194RRD7   H9JUI0   A0A212F231   A0A0L7KMQ4   A0A0N1IHB9   A0A0N0PET2   A0A2H1VYS0   A0A2A4K5A7   A0A212F276   I4DII7   A0A194Q6J7   I4DJE1   H9JKZ2   A0A1Q3FRU6   A0A194Q138   A0A2H1VFS6   A0A194PPC7   A0A0L7K599  

Pubmed

19121390    26227816    28756777    22118469    20074338    26354079    + More
22651552    10861234   

EMBL

BABH01012981    NWSH01001398    PCG71373.1    ODYU01008068    SOQ51354.1    NWSH01006959    + More
PCG63175.1    JTDY01001151    KOB74729.1    PCG71375.1    PCG71374.1    KZ149910    PZC78151.1    JTDY01004206    KOB68460.1    ODYU01010604    SOQ55826.1    PCG71376.1    ODYU01011234    SOQ56848.1    ODYU01010994    SOQ56451.1    JTDY01000816    KOB75772.1    PZC78150.1    NWSH01001143    PCG72417.1    ODYU01009744    SOQ54378.1    PZC78149.1    AGBW02012537    OWR44869.1    EZ407245    ACX53802.1    KQ460317    KPJ16010.1    KQ461178    KPJ07785.1    ODYU01001522    SOQ37854.1    AK405443    BAM20756.1    KPJ07786.1    KPJ07784.1    KQ459602    KPI93179.1    ODYU01012735    SOQ59194.1    KPI93178.1    KPI93176.1    NWSH01001353    PCG71567.1    BABH01022835    KQ460655    KPJ12938.1    KPJ12937.1    JF433973    AEM17060.1    KQ459595    KPI95966.1    AGBW02014512    OWR41545.1    JTDY01000942    KOB75350.1    OWR41546.1    KPJ12939.1    KPI93177.1    KPI95965.1    KPI95964.1    AK404043    BAM20116.1    AF255341    AAF70499.1    SOQ37852.1    BABH01022634    AGBW02013539    OWR43254.1    ODYU01013212    SOQ59906.1    NWSH01004416    PCG65151.1    GEYN01000185    JAV44804.1    ODYU01006626    SOQ48636.1    SOQ37853.1    GEYN01000184    JAV44805.1    NWSH01003146    PCG66863.1    PCG71569.1    ODYU01000551    SOQ35503.1    BABH01022833    BABH01022834    JTDY01007623    KOB65070.1    JTDY01006084    KOB66312.1    BABH01022635    BABH01022636    KQ460254    KPJ16339.1    AGBW02010783    OWR47820.1    KQ459604    KPI92523.1    AK403809    BAM19952.1    KQ460650    KPJ13113.1    ODYU01010177    SOQ55120.1    JTDY01009080    KOB64125.1    KQ459579    KPI99448.1    GEYN01000194    JAV44795.1    KOB66313.1    NWSH01000090    PCG79695.1    PCG65148.1    OWR43255.1    ODYU01002398    SOQ39832.1    BABH01002061    PCG65149.1    PCG65150.1    KPJ16338.1    KQ459765    KPJ20037.1    AGBW02010784    OWR47781.1    JTDY01008777    KOB64405.1    KQ460571    KPJ13957.1    KQ459717    KPJ20326.1    ODYU01005275    SOQ45968.1    NWSH01000134    PCG79206.1    OWR47824.1    AK401105    KQ459528    BAM17727.1    KPJ00060.1    KQ459386    KPJ01162.1    AK401409    BAM18031.1    BABH01011332    GFDL01004892    JAV30153.1    KQ459580    KPI99297.1    ODYU01002131    SOQ39232.1    KQ459596    KPI95296.1    JTDY01010313    KOB58251.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053240    UP000053268    + More

PRIDE

H9JHN5    H9JUQ7    H9JUQ8    H9JUE7    H6AGY1    H9JUK7    + More
H9JUE8    H9JUK8    H9JUH9    H9JG62    H9JUI0    H9JKZ2   

Pfam

PF00106   adh_short        + More
PF00292   PAX

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR002347   SDR_fam       
IPR020904   Sc_DH/Rdtase_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR001523   Paired_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF46689   SSF46689       

Gene 3D

1.10.10.10    

ProteinModelPortal

H9JHN5   A0A2A4JIX4   A0A2H1WFW5   A0A2A4ITT1   A0A0L7LH86   A0A2A4JH23   + More
A0A2A4JIH1   A0A2W1BUV9   A0A0L7KZ86   A0A2H1WS78   A0A2A4JHX2   A0A2H1WUW2   A0A2H1WTS2   A0A0L7LK01   A0A2W1BZ77   A0A2A4JK27   A0A2H1WMX1   A0A2W1BSW8   A0A212ETR6   D2SNW1   A0A0N1IIA2   A0A0N0PB24   A0A2H1VC89   I4DS66   A0A0N1PFW5   A0A0N0PAS3   A0A194PKC3   A0A2H1X3K0   A0A194PJG5   A0A194PID7   A0A2A4JHN9   H9JUQ7   H9JUQ8   A0A0N1IGV7   H9JUE7   A0A0N0PC39   H6AGY1   A0A194PR87   A0A212EJ88   A0A0L7LIU8   A0A212EJ84   A0A0N1IFH9   A0A194PIN0   A0A194PXT8   A0A194PT74   I4DQC6   Q9NBB5   A0A2H1VBR9   H9JUK7   A0A212EP45   A0A2H1X3T6   A0A2A4IZG3   A0A1Q3G5L3   A0A2H1W6Q5   A0A2H1VAH5   A0A1Q3G5H6   A0A2A4J612   A0A2A4JIE3   A0A2H1V3T7   H9JUE8   A0A0L7KPN2   A0A0L7KSS2   H9JUK8   A0A0N0PDP5   A0A212F250   A0A194PHJ7   I4DPW2   A0A0N1IDX2   A0A2H1WPX2   A0A0L7KLX4   A0A194Q286   A0A1Q3G5G6   A0A0L7KSR6   H9JUH9   A0A2A4K610   A0A2A4J0E8   A0A212EP29   A0A2H1VHE2   H9JG62   A0A2A4IZU2   A0A2A4J134   A0A0N0PDE1   A0A194RRD7   H9JUI0   A0A212F231   A0A0L7KMQ4   A0A0N1IHB9   A0A0N0PET2   A0A2H1VYS0   A0A2A4K5A7   A0A212F276   I4DII7   A0A194Q6J7   I4DJE1   H9JKZ2   A0A1Q3FRU6   A0A194Q138   A0A2H1VFS6   A0A194PPC7   A0A0L7K599  

PDB

1XKQ     E-value=1.34634e-33,     Score=355

KEGG

101742703    no KO assigned | (RefSeq) 17-beta-hydroxysteroid dehydrogenase 14-like

GO

GO:0016491   GO:0016021   GO:0005634   GO:0007275   GO:0003677   GO:0006355   GO:0016226   GO:0051536   GO:0005507   GO:0006000   GO:0004553   GO:0006334   GO:0003779  

Subcellular location

Nucleus  

Length:

260

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.38825

Exp number, first 60 AAs:

7.90339

Total prob of N-in:

0.41238

outside

1  -  260

 

 

Pi

260.959707

Theta

235.644671

Tajima's D

0.374106

CLR

1.322065

CSRT

0.478126093695315

Interpretation

Uncertain