Silkworm Genome Informatics Database

Gene

KWMTBOMO01231

Annotation

Uncharacterized_protein_OBRU01_02090_[Operophtera_brumata]

Location

Bomo_Chr3(-):5695888-5698927 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.421 Nuclear Reliability : 1.757

CDS

ATGTCTAAAGTGATAAAAAGTGGTGGCCGAGAAATGATACTGCAAGTAATGGCGTTTTGTGAAGCAGAACAGCAAAATCAAGGACTTTTGATACCATTAGACAGTGTACGCAAGAGAGTTGCTGCCATTACAGGTGTGTCTGAGAAAACCGTATCAAGAATAGTACAAGAAGGAAAGACTGCTGCAAGTACTTCAAAAAAGATTGTTACACCAGGGAAGAGTCGTGCACGTCCAAATAAGATCATTATAGATGATTTTGATATTTGTGCTATTCGCCATAAAATTCACCAATTTTATGCTGTAAAAAAGGAACTGCCGATATTAAACAAATTACTTGCAGTAAACATAACTATGTCGCAATTATCTGCGATTGAGGTTGCTCAAAGAAACTTGGAAGAGTGCTTCACGAAAAGAATGGCCGATCTTGAGGCACAGCTTCATGCTGGAGGGCCTGCGAAGGATACAGTCTCCAAGGTTGCGGAGGAATTCCGAACATTCCGGGAACTTATATTCTCTATGTTGAAACTTCTTCGACAGCAGATTGGTGAGTGCACTCGACTGGTTGATGCGATCGAGACCAGACATCGTCGAAAAAACCTCATCTTTCTGGGAGTCCCTGAAGTTCAAAACGAAGACTGCACCGCTGCCATCTTGGATATTTTGCATAAAAAAATGCTTCTGAATACCTCTGCTGCTGACTTCAATGTGTGTCACCGTATAGGAGCTACTAATAAGGATCATCACCGCCCAATCCTGGTCAGATTGAAATGCTTAGATACACGGATGTCGATTTGGAGGACGAAGTCCAAACTTAAAGGTTCTCCTGTGTCCATCAAGGAATTCCTTACAAAATCTCGACAGGCGGTGTTCGGCAAGAGCCGTCAGTATTTTGGTGTGCGTCAATGTTGGACGCAAGACGGGGTCATTATTATCAAGGCTGCGGGTGGAAATCGTCACAGATTGACCACTATGGATGAGTTTAGCGACCTCGCAGTTAAATATCCTATTGTGGATGGTAAGCCAACATCAGCTAAGGGCAGCGTCTCTAAGGCGGCACCGGCTATCACTGTGAACTCGAAATTGCGGAAGACCTAG

Protein

MSKVIKSGGREMILQVMAFCEAEQQNQGLLIPLDSVRKRVAAITGVSEKTVSRIVQEGKTAASTSKKIVTPGKSRARPNKIIIDDFDICAIRHKIHQFYAVKKELPILNKLLAVNITMSQLSAIEVAQRNLEECFTKRMADLEAQLHAGGPAKDTVSKVAEEFRTFRELIFSMLKLLRQQIGECTRLVDAIETRHRRKNLIFLGVPEVQNEDCTAAILDILHKKMLLNTSAADFNVCHRIGATNKDHHRPILVRLKCLDTRMSIWRTKSKLKGSPVSIKEFLTKSRQAVFGKSRQYFGVRQCWTQDGVIIIKAAGGNRHRLTTMDEFSDLAVKYPIVDGKPTSAKGSVSKAAPAITVNSKLRKT

Uniprot

A0A2A4JAE4

EMBL

NWSH01002122 PCG69097.1

Proteomes

UP000218220

Pfam

PF00027 cNMP_binding

Interpro

IPR000595   cNMP-bd_dom        + More
IPR014710   RmlC-like_jellyroll
IPR018490   cNMP-bd-like

SUPFAM

SSF51206 SSF51206

Gene 3D

2.60.120.10

CDD

cd00038 CAP_ED

ProteinModelPortal

A0A2A4JAE4

KEGG

101738625 no KO assigned | (RefSeq) uncharacterized LOC101738625

GO

Length:

364

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01432

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.03343

outside

1 - 364

Pi

236.447109

Theta

211.209577

Tajima's D

0.437271

CLR

0.209433

CSRT

0.491875406229689

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree