SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01230  Validated by peptides from experiments
Annotation
NA
Location in the cell
Extracellular   Reliability : 1.337 Nuclear   Reliability : 1.932
 

Sequence

CDS
ATGTTCGGTCCGCGCCGATACAGTTCTGTGTTAGTGTTATTTGTAGTGATTTTCCTAAACGTGAAATCCTATGCACAACAGTGCTACGTGTGTCGGGACTGCAACGTGGTCTCATCAGAACACATTCAAACCTGTAGTCCCAGAACGACAAACTCCCCACAAGAAACAGATGCAACTTCCACCCTAAAAGCTGAAACAACCACTAACAGTTATAATACAGCAGATCCTGTTACAACATCTACAACGGCTTCTCCTACTGAAACTACACAATCCACAACACCACCAAATATTTACACCGTTATTACTTCTTTGCCAGAATTAACAACAACTACCTCAGAACAATCTCCAACAACAATTACTGTACCAACTGACACATTATCAACTGATGTCTCTCAAACTATAACGGAAAGCCTGCCTGTAATAACAAATACTATTTCATTTCAAACGACGTCTCAGTTACCTATTGAAACAACTTCAGCAATATCTCAAACAACAACGAATTCAGCAAGCGAAATAACGGCTGTTACAACTGCTATGCCGTCCGAAGCGACAACATCAGCACCACCTCAAACAACTAATAATATCCAAACTGAAAGAACAACAACTGTGCCTCAAACAACTTCTGATATACCAATCGATATAACAACTACTATAGCACCTCAAACAACTACTGATGCACCAAACGAAATAGTAACAACTGAACCGTCTGAAACTACCACTAATGTGCCAAGGGAAGCAACGACAATTGCAACCCAAACACCTACTGATGTTCCAACCGAGATAGCAACTGAACAGCAACCAATAACAACCGCTGCAATTTCGGCAGAAACTACCATCGCACCGAATACAATTATTTCGGTTGATACTACGATAATTCCGGCAGAATCTACACCATCTGAAATGACAACATCCGAATCTATTAACATTAGTCCCGAAACAACAACTTTATCATATCCAGAAATAACGCTGGACGTAACAAGCAGTACACTTTTGCCTGAAGAAACAACAGCTAACTCAGCGCTTCCATCCACAGTACCACCAGCGACAATTTCACCTATTGTAACCACGACTACTGCACCAATTGAGTTCACAAGCACAGTCATTTCAGCTTCAACAACCAATCCCCCACCCATAACAACGAACGGCTATACAGAAATATCAACAAATTTACCAACAACAGTAATTCCACAAACTACAGATTTGCCTACGACGGAATTTAGTGTTACAACAGGTTCTCCCGATCACATAGTAACTGAAAGAAATCCCAGTGGGCCACTAATAACTAGGGATGATTCAGATATTCAAACGACCGAATCACAATTACCTCAAGATACGAATGCTCGTGTTGGATTTTTGAGAACAATTAGATCCTTGAAAAGTGGTTCAGAAATTGGCTGCGTCACGACAACGTATGAAGAAAACGGAAGATTGACTACTGTTAGAGGTTGTACCCACACCAGTGACGATCCTGAGGTCAGCTGCCGTGAGGTCATCGGCGACAATTTCAGTGGAGCATTATCGTCTTGTAAAGTATGCACTGGCGACTTATGCAACTCCTCCAACAAATCTACAGTAACTATTATATTACTGATAGCTAGCTTAAGCTTAGTTAAGTTTATTGTGTAG
Protein
MFGPRRYSSVLVLFVVIFLNVKSYAQQCYVCRDCNVVSSEHIQTCSPRTTNSPQETDATSTLKAETTTNSYNTADPVTTSTTASPTETTQSTTPPNIYTVITSLPELTTTTSEQSPTTITVPTDTLSTDVSQTITESLPVITNTISFQTTSQLPIETTSAISQTTTNSASEITAVTTAMPSEATTSAPPQTTNNIQTERTTTVPQTTSDIPIDITTTIAPQTTTDAPNEIVTTEPSETTTNVPREATTIATQTPTDVPTEIATEQQPITTAAISAETTIAPNTIISVDTTIIPAESTPSEMTTSESINISPETTTLSYPEITLDVTSSTLLPEETTANSALPSTVPPATISPIVTTTTAPIEFTSTVISASTTNPPPITTNGYTEISTNLPTTVIPQTTDLPTTEFSVTTGSPDHIVTERNPSGPLITRDDSDIQTTESQLPQDTNARVGFLRTIRSLKSGSEIGCVTTTYEENGRLTTVRGCTHTSDDPEVSCREVIGDNFSGALSSCKVCTGDLCNSSNKSTVTIILLIASLSLVKFIV

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 25,         Likelihood:  0.998003
 
 
Length:
541
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.33733
Exp number, first 60 AAs:
5.02506
Total prob of N-in:
0.25844
outside
1  -  541
 
 

Population Genetic Test Statistics

Pi
239.910211
Theta
184.008713
Tajima's D
0.548714
CLR
0.268668
CSRT
0.534873256337183
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27102218 EVIGDNFSGAISSCK 100.00 4e-05
28556443 EVIGDNFSGALSSCK 100.00 4e-05
28556443 VTLIPVEALPR 100.00 4e-05
28556443 DCNVVSSEHIQTCSPR 100.00 5e-04
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