SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01216
Annotation
MOXD1-like_protein?_partial_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.569 PlasmaMembrane   Reliability : 1.296
 

Sequence

CDS
ATGCAGCTCCAACTAGTTTTAACATTGTGTGTAATTTTATTATGCGACGCAAAGCTGCCGCGGTTCAGACAGCTGATTCAACCCAACGAGCTACCAGCGAATCTCACGCAGAACTCGCAAACGTTAAGACATCGACAAACAGAATCGAAAAATGAGAAAACTAGTCGAATAGCCGATCAGTACAGACAGAGGCATCGGAGGGACGTGTTCGATTCAACTTCTTACGAATCGAGTTTGATATGGGCTCACTCCGAGAGATTAGATCAAAATGGCGACGTTGTCCTAAGATGGGTGTACTCGGATTCGAGTATAACGTTTAGGTTGGAGGCGAGAACTCTTGGTTACGTCGGCTTAGGATTTAATACTGTTGGGAACATGAGAGGCGCAGATTTGGTAGTCGGCTGGGTCGACGACAGGAATGGCAACGCTCAGATTGTGGTGAGTTTGATCAAGATTTTAAAACAGCTGTTCCTTTATTCTCACGGTCTTGGGTTGCTCGAAGTATGCTTTTTTTTTGTCCCAATCAAGTTTTGA
Protein
MQLQLVLTLCVILLCDAKLPRFRQLIQPNELPANLTQNSQTLRHRQTESKNEKTSRIADQYRQRHRRDVFDSTSYESSLIWAHSERLDQNGDVVLRWVYSDSSITFRLEARTLGYVGLGFNTVGNMRGADLVVGWVDDRNGNAQIVVSLIKILKQLFLYSHGLGLLEVCFFFVPIKF

Summary

Pfam
PF03351   DOMON        + More
PF03712   Cu2_monoox_C
PF01082   Cu2_monooxygen
Interpro
IPR005018   DOMON_domain        + More
IPR014784   Cu2_ascorb_mOase-like_C       
IPR036939   Cu2_ascorb_mOase_N_sf       
IPR008977   PHM/PNGase_F_dom_sf       
IPR024548   Cu2_monoox_C       
IPR028460   Tbh/DBH       
IPR000323   Cu2_ascorb_mOase_N       
SUPFAM
SSF49742   SSF49742       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.987460
 
 
Length:
177
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
10.72374
Exp number, first 60 AAs:
0.04359
Total prob of N-in:
0.20239
outside
1  -  177
 
 

Population Genetic Test Statistics

Pi
293.153939
Theta
156.191294
Tajima's D
0.536603
CLR
1.07347
CSRT
0.524723763811809
Interpretation
Uncertain
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