SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01213
Pre Gene Modal
BGIBMGA014464
Annotation
PREDICTED:_uncharacterized_protein_LOC105842655_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.175
 

Sequence

CDS
ATGATTTCGAACGTATTAGCCGTTGTTATATTGCTGACCTCATCTACACTGGTGCTGTGTCAGCGACCCTCCTTCGCCGGATCAAGGCCGATTGGATTCCCGGATACACCTAACAGGACCACCACCGTAGCTGTCGGAGACAGATTTGGCGATGACGACTCAACAACGCCAAGACTTCCGATCGAAGCGAACGGAGACTTAGAGTTGATCGATAGACTGAGCAAGCTGCCTGTTGACAAGCAGCCCTTCTGGTTCATCAACTGGCAAGCCTTAGAAGCGCACAGGAAGAACCCACAAACCCACGTGCAGAGGCCTAACGGATTCATAGATCCCATCATGCCCAGTCAAAACGCTGCTACCGCCCAAGCAAACTCAAACGCAGTGTCGTCAGTATCGAGCAGCGGGTCATCGAACTCCACACCGACCAGTAGCTCGGTTCAAAGCAACGCTAATGCAGCTATAGGAGACAGATTTGATTCTGACGTCACCAATGTTAAACCAACGAGCACCGTTGCAAACAAACCCGGCGCGGAAAGTACGGTCACAGCTGAACCCTACAGCCTCCAATGGTTCGTAAATCATTATTCAACGACAACAAAAAAAACTGACGCGAAAACATCTCGATAG
Protein
MISNVLAVVILLTSSTLVLCQRPSFAGSRPIGFPDTPNRTTTVAVGDRFGDDDSTTPRLPIEANGDLELIDRLSKLPVDKQPFWFINWQALEAHRKNPQTHVQRPNGFIDPIMPSQNAATAQANSNAVSSVSSSGSSNSTPTSSSVQSNANAAIGDRFDSDVTNVKPTSTVANKPGAESTVTAEPYSLQWFVNHYSTTTKKTDAKTSR

Summary

ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.886851
 
 
Length:
208
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.84285999999999
Exp number, first 60 AAs:
4.84269
Total prob of N-in:
0.27858
outside
1  -  208
 
 

Population Genetic Test Statistics

Pi
179.109987
Theta
151.099427
Tajima's D
0.666417
CLR
2.602526
CSRT
0.569971501424929
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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