SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01206
Pre Gene Modal
BGIBMGA008810
Annotation
PREDICTED:_uncharacterized_protein_LOC106143374_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.622 Nuclear   Reliability : 1.043
 

Sequence

CDS
ATGAAGATTACAGTACTCTGCGTAGCTATGATGGTTATTTGCTGCTCGGCCCAACGTTCGCCATACGCTGGAAGACAACCAATAGGTTTTCCTGCAATTCAAAGCACGGCACCCCCAGAAGACGCTTTGGGCAATAGATTCGGAGACGATATCAGTACGACGACAATACGACTCCCGATCGAAGCTTTGGGTGACGCTGACCTGGTGAATCGACTAAGAAAACTGCCGGTCGACAAGCAGCCGTTTTGGCTCCTCAACTGGCTGGCTTTGGAAGCCAACAGGAAGAATCCACAGAATTTCAATCAAAGACCGAATAGTTTTCTCGATAACTCCATTAGGAATGTTTAA
Protein
MKITVLCVAMMVICCSAQRSPYAGRQPIGFPAIQSTAPPEDALGNRFGDDISTTTIRLPIEALGDADLVNRLRKLPVDKQPFWLLNWLALEANRKNPQNFNQRPNSFLDNSIRNV

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01039328    ODYU01005969    SOQ47409.1    KZ150020    PZC74913.1    NWSH01007163    + More
PCG63061.1    AGBW02009098    OWR51690.1    AK401799    KQ459583    BAM18421.1    KPI98640.1    BABH01042699    NWSH01002894    PCG67359.1    PZC74915.1    GAIX01000468    JAA92092.1    KPI98642.1    AGBW02009068    OWR51755.1    BABH01039338    KQ460366    KPJ15633.1    ODYU01003176    SOQ41586.1    KPI98643.1    NWSH01002910    PCG67311.1    ODYU01007537    SOQ50395.1    OWR51693.1    PZC74911.1    OWR51695.1    JTDY01001174    KOB74650.1    KPJ15635.1    HM023807    ADJ58540.1    OWR51692.1    GDQN01009224    JAT81830.1    CVRI01000001    CRK86561.1    OWR51694.1    AK401565    BAM18187.1    LJIG01022763    KRT78846.1    KQ458860    KPJ04825.1    KPJ15631.1    KQ971307    EFA11052.1    AE014296    BT030906    BT030927    BK002263    AAS65091.1    ABV82288.1    ABV82309.1    DAA03106.1    PZC74914.1    ODYU01004608    SOQ44673.1    KQ976405    KYM91861.1    ADTU01009064    CM000363    CM002912    EDX11399.1    KMZ01040.1    KQ982543    KYQ55362.1    KPI98644.1    KQ979640    KYN20051.1    KQ435794    KOX73738.1    CH480826    EDW44381.1    CH954178    EDV52672.1    APGK01020323    KB740193    KB631669    ENN81062.1    ERL85175.1    JXJN01017882    CCAG010000766    GEDC01023694    JAS13604.1    ACPB03014189    CH891690    EDW99648.1    GEZM01095099    JAV55508.1    JR049756    AEY61065.1    CM000159    EDW94974.1    KZ288324    PBC28083.1    EDV52707.1    GEZM01047546    JAV76812.1    KY030929    ATU82680.1    PYGN01000046    PSN56310.1    GDHF01022863    JAI29451.1    JTDY01002715    KOB70863.1    NEVH01006740    PNF36593.1    GBXI01010599    JAD03693.1   
Pfam
PF00135   COesterase        + More
PF00001   7tm_1
Interpro
IPR029058   AB_hydrolase        + More
IPR002018   CarbesteraseB       
IPR019819   Carboxylesterase_B_CS       
IPR017452   GPCR_Rhodpsn_7TM       
IPR000276   GPCR_Rhodpsn       
SUPFAM
SSF53474   SSF53474       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.994035
 
 
Length:
115
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.17318
Exp number, first 60 AAs:
0.17318
Total prob of N-in:
0.30211
outside
1  -  115
 
 

Population Genetic Test Statistics

Pi
237.424459
Theta
159.837815
Tajima's D
1.496917
CLR
0
CSRT
0.784610769461527
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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