SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01204  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008803
Annotation
Uncharacterized_protein_OBRU01_08609_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.769
 

Sequence

CDS
ATGGCAACATTAAACACCATACTTTTCGTTTTTATGATTCTGGGAGCGTTTGTAAAAGCCCAAAGACCGTTTTACGCTGGCCTCAGTCCCATAGGGTATCCAGCCGTGGAGACTGATTTGCTATCGAACAGATTCGGGGAAGACGAGGAAGCTCCTATCGAAGTCCGAGGCGACGGCAATCTGATTAACCGATTAAATTCTTTACCAATCGAGAACCAACCCTTCTGGTACCTGAACTGGAAAGCCTATGAGGCTCTAAGAAAAAGACCCCAAACCTTCCAGCAAAGACCGAACAATTTTATCGATAGAAATTAA
Protein
MATLNTILFVFMILGAFVKAQRPFYAGLSPIGYPAVETDLLSNRFGEDEEAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALRKRPQTFQQRPNNFIDRN

Summary

Similarity
Belongs to the G-protein coupled receptor 1 family.
EMBL
BABH01039338    JTDY01001174    KOB74650.1    ODYU01007537    SOQ50395.1    KZ150020    + More
PZC74911.1    NWSH01002910    PCG67311.1    AGBW02009098    OWR51693.1    OWR51695.1    AK401565    BAM18187.1    OWR51694.1    OWR51692.1    GDQN01009224    JAT81830.1    NWSH01002894    PCG67359.1    KQ459583    KPI98642.1    KQ458860    KPJ04825.1    BABH01039328    HM023807    ADJ58540.1    PZC74915.1    KQ460366    KPJ15631.1    AGBW02009068    OWR51755.1    GAIX01000468    JAA92092.1    BABH01042699    OWR51690.1    KPJ15633.1    AK401799    BAM18421.1    KPI98640.1    ODYU01005969    SOQ47409.1    NWSH01007163    PCG63061.1    ODYU01003176    SOQ41586.1    KPJ15635.1    PZC74913.1    PZC74914.1    ODYU01004608    SOQ44673.1    KPI98643.1    CVRI01000001    CRK86561.1    JTDY01002715    KOB70863.1    KQ971307    EFA11052.1    APGK01020323    KB740193    KB631669    ENN81062.1    ERL85175.1    LJIG01022763    KRT78846.1    LBMM01001180    KMQ96767.1    GL438317    EFN69165.1    KPI98644.1    GEZM01095099    JAV55507.1    GL888161    EGI66318.1    KQ435794    KOX73738.1    KQ979640    KYN20051.1    JAV55508.1    GEZM01047546    JAV76812.1    GGMS01017047    MBY86250.1    GEDC01023694    JAS13604.1    GGMR01003664    MBY16283.1    KY030929    ATU82680.1    NEVH01006740    PNF36593.1    GGMS01007292    MBY76495.1   
Pfam
PF00001   7tm_1        + More
PF00135   COesterase
Interpro
IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       
IPR029058   AB_hydrolase       
IPR002018   CarbesteraseB       
IPR019819   Carboxylesterase_B_CS       
SUPFAM
SSF53474   SSF53474       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.957745
 
 
Length:
104
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
11.62603
Exp number, first 60 AAs:
11.62486
Total prob of N-in:
0.60943
POSSIBLE N-term signal
sequence
outside
1  -  104
 
 

Population Genetic Test Statistics

Pi
318.430901
Theta
208.780487
Tajima's D
1.653411
CLR
0.14444
CSRT
0.818659067046648
Interpretation
Uncertain
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