Silkworm Genome Informatics Database

Gene

KWMTBOMO01198

Annotation

PREDICTED:_neurofilament_medium_polypeptide-like_[Bombyx_mori]

Location

Bomo_Chr3(+):4230070-4231914 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.203

CDS

ATGGCCACAACAATAAAGGAGGCCACGGAAGATCTAGCTTCCAGATCGGCCAACGAGGAAACCCTGAGGCTGCAGGCACTCAGCGAGAGACAGGAGGCGGAGATCCTGCAGCTCAGGAAGGAAGTAGAGGACGTAAGAGCGGAAATGGTGCGCCTCGCTCAGACGACAGCGCAGCCCACTCCCGCCCCAACACTGCCAAACGAAGAGGACGAGCGACGCCTGCAGATAATCATGCGAGCAGTCGGGTCCATGCTGGACGCCCGACTCGCGGGTCTGGAGGCCCGTCTACTCCCAGAGCCTCGCTTGCGACCACCTTTGGCCGCTGACGCAAGAAGGAGGAGCAGAGAGAGCGAAATCGATCCAGACACTGTAGGTCTTGTGTCGGAGGCAACGCCGCCTTATGCGGCTCTGCCCCAGCTTGAGACCAACAAGAAAGTGAAGCCCAAGAAACAGAAGGGCAATAACAAGAAGACGACGCCGTCAGCTCCACCCGAGCCGCCAGCTCCACCCGAGCCGCGCGCATTCCCTCCGGCCCCCGCTGCCCTTACGGTCAGTTGGGCGACCGTTGCGCGTAGAGGAGCACGGCCGAGAAGGGAAAAGGAGCCAGCACCGACGACCAACGCGGAAGGCCAACGAGACAGAAACCCTGCCCCGCTCAAGCCTAAGAAGAAAGGTAGAAAGAAGAGACTTCGAGCTCCGCGCTCGCAGGCCGTTATTCTGAGGCTGCACCCGGAGGCCATCGAAAAGGGGCTCTCCTACCGGGAGGTACTCGCCGAGGCGAGGGCCAGCATCGACGCCGGAGCCTTAGGGATCCCCATCGAGAAGGTCCGGTCAGCAATAACCGGAGCCAAAATACTCATAGTGAGCGGCGAGGACCAGATCGCGAAGGCCGACTTGCTGGCCGAGAAGCTCAAGGAGGTTCTCTCTTCCAAGAGAGTAACGGTGACAAGACCGATAGTGACCGCTGCAATCCGCATAAGCGGACTTGACGATTCGCTGACGGAGGAGGAGATATGCACCGAGCTTGCGCGCATCGGCGAATGCTCCGTCGATGCAGTCAAGGCTGGCTCTATCAAGCCCGGATCCGGAGGAATGGGCCAGGTTCTCGTTCGTTGCCCGATAGCAGCGGCGAAGAAAATTGTTACAGTGACGAAGCTGCGCATCGGGTGGAGCGTTGTTCGCGTCCACCTGCTGGAGGCCCGGAGGCTACAATGCTTCCGCTGCCACGCGTTGGGCCATGTGGGTGCGCGGTGCCCGTCGTCGGTCGACCGCAGCCACGACTGCTACCGGTGCGGACAGACCGGCCACGTGGCATCCGGATGCACACTGGCACCGCGATGCGCCGTCTGCGCCTCCGCCGGGAAACCAGCGGACCACACTTCGGGGGGCAAGGCCTGTGCAAGGCCCCCGAGAAAACCGAGGAGAGAGGACGTCGCTGCACCCGCGGCCGCACCCGTTGCTGCAGACCGAAGTCAACTCGGCGAGACGACGACTCCGATGGACGTCCAGCCTCCGTCGGGCACAAGGAAGACCGGGGCTTTATGA

Protein

MATTIKEATEDLASRSANEETLRLQALSERQEAEILQLRKEVEDVRAEMVRLAQTTAQPTPAPTLPNEEDERRLQIIMRAVGSMLDARLAGLEARLLPEPRLRPPLAADARRRSRESEIDPDTVGLVSEATPPYAALPQLETNKKVKPKKQKGNNKKTTPSAPPEPPAPPEPRAFPPAPAALTVSWATVARRGARPRREKEPAPTTNAEGQRDRNPAPLKPKKKGRKKRLRAPRSQAVILRLHPEAIEKGLSYREVLAEARASIDAGALGIPIEKVRSAITGAKILIVSGEDQIAKADLLAEKLKEVLSSKRVTVTRPIVTAAIRISGLDDSLTEEEICTELARIGECSVDAVKAGSIKPGSGGMGQVLVRCPIAAAKKIVTVTKLRIGWSVVRVHLLEARRLQCFRCHALGHVGARCPSSVDRSHDCYRCGQTGHVASGCTLAPRCAVCASAGKPADHTSGGKACARPPRKPRREDVAAPAAAPVAADRSQLGETTTPMDVQPPSGTRKTGAL

Uniprot

NA

ProteinModelPortal

NA

KEGG

105842334 no KO assigned | (RefSeq) neurofilament medium polypeptide-like

GO

GO:0003676 GO:0008270 GO:0006570 GO:0051287 GO:0006000 GO:0004553 GO:0005634 GO:0006334 GO:0003779 GO:0016021

Length:

514

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00176

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00654

outside

1 - 514

Pi

112.725296

Theta

39.152003

Tajima's D

2.167138

CLR

0.384279

CSRT

0.907154642267887

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree