Silkworm Genome Informatics Database

Gene

KWMTBOMO01195

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr3(+):4212140-4213386 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.666 Nuclear Reliability : 1.908

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTAACATACTGAAAAATTTGAATATAACCAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACAAAAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCATATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGATGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCACGTGAAATCGACTTCATCCGGCACGAAGACTGGCTCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MEWTLKEDRVAVIALHRCGYAPIQIFNILKNLNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKQKSYNKQNDKVYAHSSEEASNHIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLMNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWLSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE

Uniprot

A0A0C2GWR6 E3M065 E3ND45 A0A183FT12 A0A3P7ZBK4 H3EZH8 + More
A0A1L5BY18

Pubmed

18806794 25527032

EMBL

KN728607 KIH63514.1 DS268420 EFO87874.1 DS268606 EFO93488.1 + More
UZAH01027002 VDO87649.1 KX931010 APL98300.1

Proteomes

UP000008281 UP000050761 UP000005239

Pfam

PF13358 DDE_3 + More
PF00292 PAX

Interpro

IPR036388   WH-like_DNA-bd_sf        + More
IPR009057   Homeobox-like_sf
IPR038717   Tc1-like_DDE_dom
IPR001523   Paired_dom

SUPFAM

SSF46689 SSF46689

Gene 3D

1.10.10.10

ProteinModelPortal

A0A0C2GWR6 E3M065 E3ND45 A0A183FT12 A0A3P7ZBK4 H3EZH8 + More
A0A1L5BY18

PDB

5CR4 E-value=1.92067e-08, Score=139

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677 GO:0006355 GO:0016787 GO:0006570 GO:0051287 GO:0006000 GO:0004553 GO:0005634 GO:0006334 GO:0003779 GO:0016021

Length:

271

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.04969

Exp number, first 60 AAs:

0.91482

Total prob of N-in:

0.08214

outside

1 - 271

Pi

21.72614

Theta

13.889246

Tajima's D

-0.686947

CLR

0.115831

CSRT

0.202389880505975

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree