SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01190
Pre Gene Modal
BGIBMGA007322
Annotation
PREDICTED:_uncharacterized_protein_LOC101735649_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.128
 

Sequence

CDS
ATGCCAGTGAACAAGTCAACACAAATTAGAGGTAACGAGATCGATAAAAGCAAACGTCGTCATAAAACTGACGACACTGTTGTTGCAACAGCGACACCAAATATCTGTGAAGATACGGTGCAATCCTCAAAAATGGAGACCCCAAACGATTACACTGGGAAACCAACAGAATTGATTCTTCAAGGCAACTCTCACTTAATGTCAAGCACCACGAGCAGTCTGGCCGATACGCCTGGTGATTCTGGTGTATTGTGTTTAGATAGTGATGCATCTGAAGCAACTAGTCAGGCCCTCATGACTCATAGTCTTGTTGGAGCAGAGGAACTAACTTGCGATAGTCTTTACGACGCTCCTCCTTCGTGCTCCCAAGACATGATAAAAAGTACCACTAGCAGCATTATGACCCGCAGTGATATTGACAATCAAAATATAGCAGCCTCAGAAGATGTTGTCCCTGAACTTGTAATTGAAACAAAAAAGTTATCACCGTTTGAAAACCTCCCTGATGTAATACTAAAAGCTTTAGAAAGTGAAAAAGGTTGTGTAGAAGAAATCAGAAAACCTGCTCTGAGATCTTGCGAACCAAAGAAATCATTATCAGAGGACATAGTATACAGACGGAGATGTAGAAAAAAGTCACAAAGTGGTCCAAGTTCACAAAAGAAAAGGGTCTCGTTTCATGAGGATATATTAAATAGCACAAAAACAGATAACATACATATTGAGCGTGGCTTCATTTCGTATAGACCAGATAGTTCATACTGTGATAGATTTAGGCAAAAGAACAATGTTGCATCTGACAGATTCTCATGGTGTGCATCTGGAGACCAAACACCAAAATATGCAGCAGATGTAGCTCAACAAACTATGTCCGATATTCTTGCATATGGAGATTCAAAAAATGATAGAAGCGGTATATTTGAATACTGTCAAAATGATGAGGCTGAAAAGCAAACTAATAAAGATAAAGACAACAATAATGAACTTAGAACAAGCGGGAAATTATATGGTTGTGATTCTAACAGCTCTGATTCTAATTTTAGTTGTGATTCAGAAACATCTTCCAGTGATTCAACTTCTTCCCATTCAAATAAAACTGAAACCTCTCCAGTGCGTAGGAAGTGTGACAAAACCCAAAAATCATACTCATGTGATGCATTTGAAAATAATGCACATGTTGCATTCATGAGGAAAACCTACTTTTCTGAAGCTGATATTGATCAATCACACAGTAGAATGAAGAAACCGCTCGAGGTTCAGCAAAGCCCAATAGCTGTAAAATCAGTTTTAAAAAAGAAACGTTACATACCTACAAATATTGTTGAAGAGAAGAAACAGAACAATAAAGTTCTAAGCTTACTGGATGCAAACAATATAATAGAGTCATTAAAAAATTTCTACAAAAACTTTCAATTCAATTTTGCTCCTGAAAGAGGTTTGCCAGAAAGTACTTTAGACTTGAACAATGTTGTTGAAGCTATTCCATGTGACATCAATCAGAACAGCAATATTTCCAAAAGCTTAGATTCTGGGTTCCATGTTGACGGGGAAGATGATTTTGTTGAAATAAATCTTAATGGTCAAACTTTGGAATCTGGTAAATCAAAAGATATTCCTGCACAGCCCAAGACTAATGTAACTGGAGTTAAGACACCTAATGGAGGATCACCTCGCCACAAACTAACACTGAATATGAAAAATCAAGATAGAAGATGTAACAAAGGAGATGTCCCAGCATCTCTTAATAAGTACATAGTTAATTGTGAAAGTACTGTGTATGAGCACAAGGGTGTATCTTATAGTTATGTACATGATACGTTCCAGACTGCATTTGATGCACCTAAAGAATCTTTTGTACCAATACCTGAGTCGACCCCAGTGAAAGAACCAACTGCAACTACAACAACAACTACAACAAACAAAGATAATTCAAAACATTCTGAAATAGATACATCAAGCAAGACATCCACACCAAAGAGGCAGTTCAATAAGAATGTCCAAGAAGAAACTGAACAAAAGAATGGTATTTCTAAACATTTGTCATCCCCTAAAAGGCAGAATGTGAACAGATATAGTCGTAAATCAGCATCAACTATCCAGAAGTTAACAGATGAAGAGAAAATTAAAGGAAATGTTGAAAACTGCTCCAACACTGACAATTCTACTTTGAAAGCCGAGAGGATGTCGCGTCTTATAGACAAAGAGGTAATAGAAAACAAAAGATTGTCTGTGAGAATGCTTACAGCAGAAGAACCATCATACTTTGACAGTTTCGAGGACAATGTCGCCATTGAATGTAACGAGAAATTAAGATTGAAAATATTTACTTATCCCAATGAAACATTGAATAGGATGATGAAAGTCCAATCACCTTATTTCATGGATGACGGATCATGGATGCCTCTATTAGTCTTCATAACAGATTACGCATTATATGTGGCCAATGTGAAGCAGAAAGGCACAGAATATGAAATCTTATGTAAATTACCCCATAATGAACTGGATGCTATAGCTGTTGGTCCCGAAGCCCAGTACATTCAGGTGATTGACATAGCAGGAAACATAGCTTGTTCGGTTGTAACGAGTGAAACTACACTCGGAGCGCGTTTAGCGTCTTCGTTGGAATGGAGCGCTCGTACATCTCCACTGCGGATACAGCGTCCGCCCGCAATGATCCCGCTCACTTGCCGGGAATTAGCCGCCGCCGTTGCCAGGAAGCGACTCGAGAAACGGGTTCCAGAAGTCCTTTTTTACGGTAGAGCGTGTTCAGAAGACGCGTGCGACAGGCTTATAGACGCACCCGGTGCCTTTGCCCCTCCACTCGAAGGATACCTCATGTGCCGCACTGACAAGAGTCGGCGCTACGAACCATGCTACTTCTTATTAAGAGCTGGGGTGCTACAGTGGGGTCCTCACAGTCCCGACGGCCTCACGCCGCTCCCGCACAGCATCGCTCTCCGCACCGCCGTGGGAGTGAGGCGGCACGTGGACGCGACCCGCAGACCGCACTGCTTCGAAGTAGCACTCGAGTCCTCTCGACTCCTACTGGCCGCACCCGATGACGCGACTGCTTCTAACTGGCTGCAGTCTCTGTTGCTACATGCCGCTCAGGCCTTAGAAGAGAAAGACGGCTACAAAAAATCGGATCGCGAGACAAGCGTACCGCCGGCAGGTTGTACGGTGCTGGTCACACCTTATGAAGTGCTCAGCGTGAGGGAGACATTAGACATGGCTTTCGTGGCCGGAGCCTCGGGGTACCTGAAGGATAGGGGGTCGGATGCTCTGCTGAAAGAATACATCGAAGAAATGCGAACCGACATCGAGATATTAGCGTGCGGATCGATAAAGAATTTGACTTCGTTTAAAATTCCGGATACAGACGAAAATTGGTGTTGCCTGGAGTGGAGCGTTTGCGAGGCGAGGGAGAGGGGCGCGGGGCTGGCGCTAGTGATGGCGAGCAGCAACGAACTCGAGCGGTTCATAGCTGCCGTCGAACAGGCATTCTGCGCACTCACCTGCGAGCCTTTCCCTCTGACCGTGGTCGAAGCCACGAAGTCATCGTGCAGCACCACACACATGAAATACGAAGCCGCCTGGTCACACATGCTCCCCTCACAGCAGTAA
Protein
MPVNKSTQIRGNEIDKSKRRHKTDDTVVATATPNICEDTVQSSKMETPNDYTGKPTELILQGNSHLMSSTTSSLADTPGDSGVLCLDSDASEATSQALMTHSLVGAEELTCDSLYDAPPSCSQDMIKSTTSSIMTRSDIDNQNIAASEDVVPELVIETKKLSPFENLPDVILKALESEKGCVEEIRKPALRSCEPKKSLSEDIVYRRRCRKKSQSGPSSQKKRVSFHEDILNSTKTDNIHIERGFISYRPDSSYCDRFRQKNNVASDRFSWCASGDQTPKYAADVAQQTMSDILAYGDSKNDRSGIFEYCQNDEAEKQTNKDKDNNNELRTSGKLYGCDSNSSDSNFSCDSETSSSDSTSSHSNKTETSPVRRKCDKTQKSYSCDAFENNAHVAFMRKTYFSEADIDQSHSRMKKPLEVQQSPIAVKSVLKKKRYIPTNIVEEKKQNNKVLSLLDANNIIESLKNFYKNFQFNFAPERGLPESTLDLNNVVEAIPCDINQNSNISKSLDSGFHVDGEDDFVEINLNGQTLESGKSKDIPAQPKTNVTGVKTPNGGSPRHKLTLNMKNQDRRCNKGDVPASLNKYIVNCESTVYEHKGVSYSYVHDTFQTAFDAPKESFVPIPESTPVKEPTATTTTTTTNKDNSKHSEIDTSSKTSTPKRQFNKNVQEETEQKNGISKHLSSPKRQNVNRYSRKSASTIQKLTDEEKIKGNVENCSNTDNSTLKAERMSRLIDKEVIENKRLSVRMLTAEEPSYFDSFEDNVAIECNEKLRLKIFTYPNETLNRMMKVQSPYFMDDGSWMPLLVFITDYALYVANVKQKGTEYEILCKLPHNELDAIAVGPEAQYIQVIDIAGNIACSVVTSETTLGARLASSLEWSARTSPLRIQRPPAMIPLTCRELAAAVARKRLEKRVPEVLFYGRACSEDACDRLIDAPGAFAPPLEGYLMCRTDKSRRYEPCYFLLRAGVLQWGPHSPDGLTPLPHSIALRTAVGVRRHVDATRRPHCFEVALESSRLLLAAPDDATASNWLQSLLLHAAQALEEKDGYKKSDRETSVPPAGCTVLVTPYEVLSVRETLDMAFVAGASGYLKDRGSDALLKEYIEEMRTDIEILACGSIKNLTSFKIPDTDENWCCLEWSVCEARERGAGLALVMASSNELERFIAAVEQAFCALTCEPFPLTVVEATKSSCSTTHMKYEAAWSHMLPSQQ

Summary

Pfam
PF00169   PH
Interpro
IPR001849   PH_domain        + More
IPR011993   PH-like_dom_sf       
Gene 3D

Ontologies

GO

Topology

Length:
1207
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02964
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1207
 
 

Population Genetic Test Statistics

Pi
250.173135
Theta
178.821497
Tajima's D
1.112125
CLR
0.281076
CSRT
0.689065546722664
Interpretation
Uncertain
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