SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01183  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007491
Annotation
PREDICTED:_ralBP1-associated_Eps_domain-containing_protein_1_[Amyelois_transitella]
Location
Bomo_Chr3(+):4015540-4021412      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.285
 

Sequence

CDS
ATGGAGGATCTCAACTTGACAGAAACCGAAACAAGATATTTCGGTGATTTGTTTTTATGTTGTGATGAAGAATCTAATGGGAAAATACCAATTTTAAAAGCAACAGAACTATTTAGATCGTCGAACATATCCAATGATATTCTGAAACAGATCATGGATATAAGCGTGTCTCCTAACAACTGTGCAACATTAAATCATATGAACAGGAAGCAATTTTACTCAGCACTTAAATTAATAGCTGCACATCAAACTAACATAGCACTTAAACCTGATCTTTTATCAACTCCTATTGATCTTCCACTGCCGAGGTTCACGTGGGCACTTAACTCAGAAGCTAATTCTGATTTAATACAGCTATCTAATTCTCCTAAAGAGCATCACATATCAAAACGTGAAAGAAATTTTGTTGGAAATATTAGTGCTTATGAACCAATAAGACTATCTTCTAATCTGTCTGATAGTGATGTTCCGCAGACATTGTCTCATGATGGGAATGAAGCACTCAGTACTGATTCTGAAATTGAGTCGGAAACAATGTCACAAAGATCTGGATCGCGTGGTCGGAGAGTGAAAACTGGGTCACCCTGGAGCACAGCGAGTGAAAGCCCAACCCCAACCAACAGCGTTGCCGAAAGAGTACACCCAGTTTGGGAACATAGTGCCACCGGTCGAGGAGTTTGGCCTACAAATACAGCTGAAGAACACACAAGACTTTTAGGCACAGAAGAAGAATCGTCCGATCGTCATTCATCTGAAGAGGATGGCGAGGGAGATACTTGCAATGACATCTGGTCTATCAGTGAGGCGCAGGCGCATCACTACGCGTCACAATTCTCACAATTGCGACCCGAACGAGGACTTCTGTCCGGACAAACTGCAAGGCTATTTTTCGAGAAATCAAGACTTCCCGTACCCGATTTAAGAAAAATTTGGCAACTATCCGACATCGATAAAGATGGAATGCTTTCATTAGAGGAGTTCAGCATAGCCATGCATCTCATTGTATTGCGGCGGAACAATATTCCGGTACCGGAGATGCTACCCCCACCGCTCGTACCAAAGGTCGATTCGCGCTTCTCACAACGCGTCGTCACTACCGACCTCGTTGACCTCGGCGCCGAGATGTTCGGCTCGGGGACTTCAGCAGACTTCAATTTCGCACCGAAATCGGACAGTGGCGCTGATCCGTACGATGCCAAAACGAGTCGCCGGCCTGAGGAGCGCCATCCGTCGGCTTCGCCTCCAAAGGCGGACGCGCAGCCGAACAAAGAGTGGACGAAGTTCGTCGACTCTCCTACATCCAGCGTTTCGAGTCCCGGTCCGAAACCAGTGAACTTTGACTTCCAGCGCGCCGCCGTCGAACGAGATCCGAAAATTTTTCATCCGGTCGCGCTGCGGGTTACACCAGAAGCTTCAGCCGGCGACGGGGACTCCCGCGCCTCCGCCTCCCCGCGGCGGGACGACGTTGCACTCGCTTTTGAGCTCGCCAGCCCCAAGCGTCCTGCCGAAACAAACGCTTCCGCCGCCGATACCCGACCTGTGCAGAGACCCCAACCACGAAAACCAGTGAAAGGGACGGGAGCTCTGCCCCCTCCTCCGACTCGCGAACCTATCGCCGCAGCAGACGAGGGGCCCGCTTCGTTGCAACCGTTGCCACGCAAAGAACCGCCACCACCGCCGCCGCCGCGTCCGCTCCGCAACCACGCACGCTCTAGTTCGCTGGACCTCACGCGTCTCAAGGGTGCACCTCCGCAGCCGCCGCCGAGGGACCCGCCCGCCGACGTACCGCCCGAGTACGAAGCCGAGGGGTTCGGGTACAATCGGGAGGACGCGGCGCGTTCCCAGGGTGCCTTCGAGGTTTACCGGCGTGCCTCTCGTGAGCCCTCTGCGGACACGGAGCCGGATGTGAAGGCGCTGCAGGAGCAGAACGCCGTGTTGCACCGCGTGTGCCGCGCGCTCATTGCCGAGCTGGCGGACGTGCAAAGGGACCGCGAGCTATTAAGGGTCATTCTGTGTGCCAATGTTCAAAAACAGTTTCATCAGATCCGTAGAGTTAGCGCAGAAGACGCGACGCTTGTGAGCATTCCTTATTTTTCATTCGCTTCGTCATTCATTGTGATAATGAACTAA
Protein
MEDLNLTETETRYFGDLFLCCDEESNGKIPILKATELFRSSNISNDILKQIMDISVSPNNCATLNHMNRKQFYSALKLIAAHQTNIALKPDLLSTPIDLPLPRFTWALNSEANSDLIQLSNSPKEHHISKRERNFVGNISAYEPIRLSSNLSDSDVPQTLSHDGNEALSTDSEIESETMSQRSGSRGRRVKTGSPWSTASESPTPTNSVAERVHPVWEHSATGRGVWPTNTAEEHTRLLGTEEESSDRHSSEEDGEGDTCNDIWSISEAQAHHYASQFSQLRPERGLLSGQTARLFFEKSRLPVPDLRKIWQLSDIDKDGMLSLEEFSIAMHLIVLRRNNIPVPEMLPPPLVPKVDSRFSQRVVTTDLVDLGAEMFGSGTSADFNFAPKSDSGADPYDAKTSRRPEERHPSASPPKADAQPNKEWTKFVDSPTSSVSSPGPKPVNFDFQRAAVERDPKIFHPVALRVTPEASAGDGDSRASASPRRDDVALAFELASPKRPAETNASAADTRPVQRPQPRKPVKGTGALPPPPTREPIAAADEGPASLQPLPRKEPPPPPPPRPLRNHARSSSLDLTRLKGAPPQPPPRDPPADVPPEYEAEGFGYNREDAARSQGAFEVYRRASREPSADTEPDVKALQEQNAVLHRVCRALIAELADVQRDRELLRVILCANVQKQFHQIRRVSAEDATLVSIPYFSFASSFIVIMN

Summary

Uniprot
H9JD94   A0A212EJJ9   A0A2H1WQX8   A0A2W1BQ71   A0A194QMU6   A0A0N1PGT1   + More
A0A1L8DVK7   A0A336K1W6   N6TMR3   U4U509   A0A224Z5H4   A0A131YJD0   A0A224Z7D4   V5HSB8  
Pubmed
19121390    22118469    28756777    26354079    23537049    28797301    + More
26830274    25765539   
EMBL
BABH01036311    AGBW02014444    OWR41654.1    ODYU01010341    SOQ55376.1    KZ149958    + More
PZC76431.1    KQ458860    KPJ04806.1    KQ460366    KPJ15616.1    GFDF01003628    JAV10456.1    UFQS01000003    UFQT01000003    SSW96743.1    SSX17130.1    APGK01058543    KB741291    ENN70510.1    KB631948    ERL87398.1    GFPF01011185    MAA22331.1    GEDV01009490    JAP79067.1    GFPF01011184    MAA22330.1    GANP01003289    JAB81179.1   
Proteomes
UP000005204    UP000007151    UP000053268    UP000053240    UP000019118    UP000030742    + More
PRIDE
H9JD94   
Pfam
PF12763   EF-hand_4        + More
PF00334   NDK
PF03194   LUC7
Interpro
IPR011992   EF-hand-dom_pair        + More
IPR002048   EF_hand_dom       
IPR000261   EH_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR004882   Luc7-rel       
IPR034907   NDK-like_dom       
IPR036850   NDK-like_dom_sf       
SUPFAM
SSF47473   SSF47473        + More
SSF54919   SSF54919       
Gene 3D
3.30.70.141    
CDD
cd00052  EH
ProteinModelPortal
H9JD94   A0A212EJJ9   A0A2H1WQX8   A0A2W1BQ71   A0A194QMU6   A0A0N1PGT1   + More
A0A1L8DVK7   A0A336K1W6   N6TMR3   U4U509   A0A224Z5H4   A0A131YJD0   A0A224Z7D4   V5HSB8  
PDB
1FI6     E-value=2.29165e-15,     Score=203

Ontologies

KEGG
101740189    K20068 RalBP1-associated Eps domain-containing protein | (RefSeq) ralBP1-associated Eps domain-conta
GO
GO:0005509   GO:0003729   GO:0005685   GO:0006376   GO:0005515   GO:0050661   GO:0051287   GO:0006000   GO:0004553   GO:0005634   GO:0006334   GO:0003779   GO:0016021  
PANTHER
PTHR12375  

Topology

Length:
709
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.95931
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00041
outside
1  -  709
 
 

Population Genetic Test Statistics

Pi
254.282228
Theta
202.761213
Tajima's D
0.659803
CLR
0.281076
CSRT
0.56097195140243
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 REIARSPSPVTPRT 100.00 2e-10
26280517 NFVAEPMGEKPVTEIAGVGEVIGK 100.00 0.011
26280517 GVTVPTR 100.00 0.012
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