SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01180  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007489
Annotation
PREDICTED:_PI-PLC_X_domain-containing_protein_3_isoform_X2_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 1.002 PlasmaMembrane   Reliability : 1.043
 

Sequence

CDS
ATGAGTGAGGATGGAGCGGCGCAAAACTTTCGTCTTGAATCATGGATGAGTGATCTACCAATACAGCTGAAGGATATACCAATAATCTACTTAGCCATACCTGGCAGTCATGACTCAATGACCTACGGCATCACAAAATCTAGTGGCCTAGCACCTGACGCTGAACCTATTCTTCATCGCTTGTACCCCTTATTCCGAGGTACGATCTTACGATGGACAATAACACAAGCTCTTGACACCAAGCAACAACTACTTATTGGCATTAGATATTTAGACCTCAGGATTGCTACAAAATCTGGTGAAGACCATTTTTATTTCACACATGGTGTTTACGCTGCTGAAATAACAGAGGCACTGAAGCAAGTCAAAGAGTTCGTTGATGAACATCCTGGAGAGGTAGTGATACTTGACTGCCAACATTTCTATGGCTTCCAACCTGAAGACCACCAGAGACTGATGAGGCTCCTCCTCAATATGTATGGTCCCATATTGGTACCACGGCAGCTTGATTTGAAAGCTGTTACTCTGAATGCTCTACAACGACTAAAGCAGCAAGTGATTGTGGTGTACCGCCACGAGTCTGTGTACGCGACGGGCGAGTTCTGGCCGCCGCAGACGTTGCCGTCGCCGTGGCCGCGCCAGGACCGCGCGCCGGGGCTGCTCGCGTTCCTGGGCGCGCTGTGTCGGCACCCGAGCGCCGGCTTCGTGCACCAGGCCGTGCTCACGCCCACCCCGGCCTTCATCGTGCTCAGATGGATATCAAGTCTCCGCGATAAATGCGCATTGCCAGTCATCAACGATGTGCTACCAAAATTATCTGATTTCTCTCCCGGACCCCCGGCACCGGACAACGAGACGTTCTCGCGGGCGCCCGTCAACGTAGTCATCGCAGACTTCGTTGACATCAATGACTCGATATTCTCAAAAACTATAATACAGTTGAACATGAAGTTGTTGAGAAACACAGATGTCCTTTATCACACCAACGAATAG
Protein
MSEDGAAQNFRLESWMSDLPIQLKDIPIIYLAIPGSHDSMTYGITKSSGLAPDAEPILHRLYPLFRGTILRWTITQALDTKQQLLIGIRYLDLRIATKSGEDHFYFTHGVYAAEITEALKQVKEFVDEHPGEVVILDCQHFYGFQPEDHQRLMRLLLNMYGPILVPRQLDLKAVTLNALQRLKQQVIVVYRHESVYATGEFWPPQTLPSPWPRQDRAPGLLAFLGALCRHPSAGFVHQAVLTPTPAFIVLRWISSLRDKCALPVINDVLPKLSDFSPGPPAPDNETFSRAPVNVVIADFVDINDSIFSKTIIQLNMKLLRNTDVLYHTNE

Summary

EMBL
BABH01036311    KZ149958    PZC76434.1    NWSH01001219    PCG72081.1    PCG72080.1    + More
GDQN01002707    JAT88347.1    GDQN01009866    JAT81188.1    KQ458860    KPJ04803.1    KQ460366    KPJ15613.1    ODYU01010796    SOQ56121.1    AGBW02014444    OWR41657.1    KQ971361    EFA08659.1    JXUM01069814    KQ562571    KXJ75575.1    GECZ01024732    JAS45037.1    GECU01013454    JAS94252.1    AJWK01030842    CH477894    EAT35279.1    DS232023    EDS32336.1    AXCM01000351    ATLV01016119    KE525057    KFB40982.1    GEBQ01015734    JAT24243.1    NEVH01009067    PNF34116.1    GFDL01013895    JAV21150.1    AJVK01031645    AXCN02001960    KK852521    KDR22106.1    AAAB01008980    EAA13925.4    APCN01001654    GECL01002016    JAP04108.1    ADMH02001597    ETN61918.1    GEZM01066301    GEZM01066300    GEZM01066299    JAV67986.1    CVRI01000054    CRK99941.1    GBGD01002200    JAC86689.1    EFA08660.1    OUUW01000010    SPP85969.1    CH479189    EDW25575.1    APGK01039948    KB740975    ENN76489.1    CH379061    EAL33165.2    KB632186    ERL89775.1    CM002910    KMY91129.1    CM000158    EDW90492.1    CH954179    EDV54581.1    GDKW01002787    JAI53808.1    GEDC01007862    JAS29436.1    CM000361    EDX05589.1    CH480822    EDW55840.1    AY089577    AAL90315.1    GDAI01002789    JAI14814.1    CH940654    EDW57897.1    AE014134    BT044106    AAF53873.2    ACH92171.1    AGB93153.1    CH902620    EDV31643.1    UFQT01000758    SSX27012.1    CP012523    ALC38882.1    CH963852    EDW75461.1    ADTU01006753    KK855666    PTY23462.1    CH933807    EDW11926.1    KQ982335    KYQ57479.1    GFPF01010557    MAA21703.1    GACK01007013    JAA58021.1    PYGN01001761    PSN32955.1    NNAY01002087    OXU22116.1    KQ980824    KYN12457.1    GL448661    EFN84033.1    GFAC01001819    JAT97369.1    CH916372    EDV99073.1    KQ976419    KYM89337.1    GAKP01012623    JAC46329.1    GL768069    EFZ12419.1    GEDV01005703    JAP82854.1    ABJB011041770    DS976400    EEC20275.1    PYGN01000432    PSN46490.1    GEFM01005485    JAP70311.1    KQ977595    KYN01600.1    GANP01010149    JAB74319.1    GEGO01005366    JAR90038.1    KK107274    QOIP01000008    EZA53679.1    RLU19211.1    GFJQ02004312    JAW02658.1    GFWV01000384    MAA25114.1    GBYB01004210    JAG73977.1    GDHF01029280    JAI23034.1    MWRG01001093    PRD34749.1    KQ435817    KOX72553.1   
Pfam
PF03490   Varsurf_PPLC        + More
PF00388   PI-PLC-X
Interpro
IPR003633   PLipase_C_var-glycoprot        + More
IPR000909   PLipase_C_PInositol-sp_X_dom       
IPR042158   PLCXD1/2/3       
IPR017946   PLC-like_Pdiesterase_TIM-brl       
SUPFAM
SSF51695   SSF51695       
Gene 3D
PDB
1AOD     E-value=2.96852e-05,     Score=112

Ontologies

Topology

Length:
330
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.2699
Exp number, first 60 AAs:
0.00356
Total prob of N-in:
0.01412
outside
1  -  330
 
 

Population Genetic Test Statistics

Pi
201.217525
Theta
153.195191
Tajima's D
0.630273
CLR
0.276014
CSRT
0.55807209639518
Interpretation
Uncertain
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