Gene

KWMTBOMO01163

Annotation

PREDICTED:_beta-1?4-galactosyltransferase_1-like?_partial_[Bombyx_mori]

Location

Bomo_Chr3(+):3678056-3686569      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.225

CDS

ATGGTCTCACTTAAGGGCCTTTACACATTTTACCCGTTAGAAGTGAAGAAACAAGGATTGCCTCGATGCCCTGAAAAGCCACCGAACTTGGGACCAGTTGTGGAAGACACAGTGATGAAGTCTTTAAAGGCGTTCGATAAACTGTATTCGGAAGTTCAAATCGGCGGCGCTTATTGTCCAACGAAATGTGTAGCACGACAACGAGTCGCCATCATTGTGCCGTTTAGAAATAACAAGAGCCGCACAAACATCAGACATCTTGGCACGTTTATGTACATGATGCATCTGTTTCTAATGAAGCAACAGTTGGAATATCGGATTTTTGTGATCGAACAGGCTAACGGGAATCATCCTTACAACCAAGGGAAACTAATGAACGCTGGCTACACTGAGGTACACCGTAGACGCAGCGGCAGATATAGATTCAACTGCCTAATATTCCATGAGCCTCATATCGTGCCAATAGACACAAGGAACTTGTACAGATGCAGCCGCTTTCCGAGATTACTGTCTTCCGTTTTGGAAAAACCTGATAAGTCAATAAAAAATTTGAAATTTGGCAACGCTGTCGCGATATCAATGGAGCAGTTCATTAGAGTTAATGGATTCTCAAATATCTACTGGGACAACGATAGATATTACGAAGATCTATTCAATCGGTACTCGTTTCGTTGA

Protein

MVSLKGLYTFYPLEVKKQGLPRCPEKPPNLGPVVEDTVMKSLKAFDKLYSEVQIGGAYCPTKCVARQRVAIIVPFRNNKSRTNIRHLGTFMYMMHLFLMKQQLEYRIFVIEQANGNHPYNQGKLMNAGYTEVHRRRSGRYRFNCLIFHEPHIVPIDTRNLYRCSRFPRLLSSVLEKPDKSIKNLKFGNAVAISMEQFIRVNGFSNIYWDNDRYYEDLFNRYSFR

Uniprot

H9JD88   G1UHW5   A0A0N1PII3   A0A212EUA0   A0A194QFY1   Q6J4T9   + More
A0A0N0PD13   A0A194QBI7   A0A142I0M7   D3JVQ9   A0A0M9A9L8   D9ID40   A0A195D1E5   A0A2A4JBF7   A0A3B5MC12   A0A3B5MA02   A0A310SNT5   A0A195F675   A0A151J208   A0A3P9P1V4   A0A182FU03   A0A151XDA2   A0A088AW76   E2AJD3   A0A087XFC6   A0A3B5KU88   M4A752   A0A158NH22   A0A2M4CUN5   A0A1L8HWV1   A0A026W1H3   A0A146SG77   A0A3B3XR67   A0A195AZH3   A0A0M3JTJ0   A0A3B3UUA1   A0A3B3XIL7   A0A2M4AT26   A0A3B5QGW2   A0A3B5QFF0   A0A3B5Q0R2   A0A087XFC0   A0A146PK84   A0A3L8DLV5   A0A182UFN1   A0A1L8HWR0   A0A182FTZ8   A0A146R9L8   A0A3P8YUF8   A0A2A3EFL8   A0A2M4BJH9   A0A2M4BJY9   A0A2I4CSP2   A0A0S7L5N0   A0A146PEQ8   A0A1I7SAB1   A0A146Q4M8   A0A182LI56   A0A3P9PRA1   A0A2H1WCS7   F6ZCF5   A0A146PMJ8   A0A154PCY0   A0A2K6FCI1   A0A3P9Q164   A0A182WCN3   A0A182FLU5   A0A0L7R4Z5   A0A182SGI5   A0A2I4CSN9   A0A182MW45   G1PTU6   A0A3B3VXJ8   A0A2M4CJH3   H0WPR4   A0A147AR60   M4AXB1   A0A2M4CJF6   A0A147AG02   A0A2M4CIS8   A0A182H392   A0A3B5M1Z6   A0A3B5LPM3   A0A3B5LXJ0   A0A2M4CVY5   A0A2M4CW51   B1AXY5   A0A182UTD2   A0A3P9P1T9   A0A182YI11   G1TZ23   H2ZBS9   Q16ND4   G3SNQ8   A0A2D0QGS2   Q17AG5   A0A383ZPS6   A0A0P6DDB9   A0A1S3REQ7   A0A0M5J2P4  

Pubmed

19121390    22635270    26354079    22118469    15173167    20798317    + More
23542700    21347285    27762356    24508170    30249741    25069045    21909270    20966253    20431018    21993624    26483478    12040188    19468303    21183079    25244985    17510324    23127152   

EMBL

BABH01036275    BABH01036276    AB620072    BAK82124.1    KQ460366    KPJ15595.1    + More
AGBW02012439    OWR45066.1    KQ459249    KPJ02356.1    AY601103    AAT11926.1    KPJ15594.1    KPJ02355.1    KR362877    AMR34866.1    GU321344    ADB79797.1    KQ435709    KOX80037.1    HM135158    ADJ10635.1    KQ976973    KYN06671.1    NWSH01002159    PCG69028.1    KQ761783    OAD57002.1    KQ981768    KYN35886.1    KQ980447    KYN16025.1    KQ982294    KYQ58354.1    GL439972    EFN66454.1    AYCK01023788    AYCK01023789    ADTU01015471    ADTU01015472    GGFL01004821    MBW68999.1    CM004466    OCU00584.1    KK107566    EZA48909.1    GCES01106620    JAQ79702.1    KQ976698    KYM77435.1    UYRR01031026    VDK43914.1    GGFK01010603    MBW43924.1    AYCK01023786    GCES01142492    JAQ43830.1    QOIP01000006    RLU21172.1    OCU00582.1    GCES01121300    JAQ65022.1    KZ288256    PBC30537.1    GGFJ01004088    MBW53229.1    GGFJ01004130    MBW53271.1    GBYX01184512    JAO84854.1    GCES01143978    JAQ42344.1    GCES01135090    JAQ51232.1    ODYU01007804    SOQ50881.1    AAMC01074947    AAMC01074948    GCES01141204    JAQ45118.1    KQ434874    KZC09755.1    KQ414654    KOC65952.1    AXCM01001992    AAPE02037202    AAPE02037203    AAPE02037204    AAPE02037205    GGFL01001299    MBW65477.1    AAQR03161616    AAQR03161617    AAQR03161618    AAQR03161619    AAQR03161620    GCES01005250    JAR81073.1    GGFL01001298    MBW65476.1    GCES01008847    JAR77476.1    GGFL01001068    MBW65246.1    JXUM01024513    JXUM01024514    JXUM01024515    JXUM01024516    JXUM01024517    KQ560692    KXJ81255.1    GGFL01004820    MBW68998.1    GGFL01005307    MBW69485.1    AL833775    CH466538    EDL05426.1    AAGW02033449    AAGW02033450    CH477828    EAT35865.1    CH477335    EAT43257.1    GDIP01002578    JAN01138.1    CP012524    ALC41656.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000053105    UP000078542    + More
UP000218220    UP000261380    UP000078541    UP000078492    UP000242638    UP000069272    UP000075809    UP000005203    UP000000311    UP000028760    UP000002852    UP000005205    UP000186698    UP000053097    UP000261480    UP000078540    UP000036680    UP000261500    UP000279307    UP000075902    UP000265140    UP000242457    UP000192220    UP000095284    UP000075882    UP000008143    UP000076502    UP000233160    UP000075920    UP000053825    UP000075901    UP000075883    UP000001074    UP000005225    UP000265000    UP000069940    UP000249989    UP000000589    UP000075903    UP000076408    UP000001811    UP000007875    UP000008820    UP000007646    UP000221080    UP000261681    UP000087266    UP000092553   

PRIDE

H9JD88    G1UHW5   

Pfam

PF13733   Glyco_transf_7N        + More
PF02709   Glyco_transf_7C
PF00337   Gal-bind_lectin

Interpro

IPR003859   Galactosyl_T        + More
IPR027791   Galactosyl_T_C       
IPR027995   Galactosyl_T_N       
IPR029044   Nucleotide-diphossugar_trans       
IPR013320   ConA-like_dom_sf       
IPR001079   Galectin_CRD       

SUPFAM

SSF53448   SSF53448        + More
SSF49899   SSF49899       

Gene 3D

3.90.550.10    

CDD

cd00070  GLECT

ProteinModelPortal

H9JD88   G1UHW5   A0A0N1PII3   A0A212EUA0   A0A194QFY1   Q6J4T9   + More
A0A0N0PD13   A0A194QBI7   A0A142I0M7   D3JVQ9   A0A0M9A9L8   D9ID40   A0A195D1E5   A0A2A4JBF7   A0A3B5MC12   A0A3B5MA02   A0A310SNT5   A0A195F675   A0A151J208   A0A3P9P1V4   A0A182FU03   A0A151XDA2   A0A088AW76   E2AJD3   A0A087XFC6   A0A3B5KU88   M4A752   A0A158NH22   A0A2M4CUN5   A0A1L8HWV1   A0A026W1H3   A0A146SG77   A0A3B3XR67   A0A195AZH3   A0A0M3JTJ0   A0A3B3UUA1   A0A3B3XIL7   A0A2M4AT26   A0A3B5QGW2   A0A3B5QFF0   A0A3B5Q0R2   A0A087XFC0   A0A146PK84   A0A3L8DLV5   A0A182UFN1   A0A1L8HWR0   A0A182FTZ8   A0A146R9L8   A0A3P8YUF8   A0A2A3EFL8   A0A2M4BJH9   A0A2M4BJY9   A0A2I4CSP2   A0A0S7L5N0   A0A146PEQ8   A0A1I7SAB1   A0A146Q4M8   A0A182LI56   A0A3P9PRA1   A0A2H1WCS7   F6ZCF5   A0A146PMJ8   A0A154PCY0   A0A2K6FCI1   A0A3P9Q164   A0A182WCN3   A0A182FLU5   A0A0L7R4Z5   A0A182SGI5   A0A2I4CSN9   A0A182MW45   G1PTU6   A0A3B3VXJ8   A0A2M4CJH3   H0WPR4   A0A147AR60   M4AXB1   A0A2M4CJF6   A0A147AG02   A0A2M4CIS8   A0A182H392   A0A3B5M1Z6   A0A3B5LPM3   A0A3B5LXJ0   A0A2M4CVY5   A0A2M4CW51   B1AXY5   A0A182UTD2   A0A3P9P1T9   A0A182YI11   G1TZ23   H2ZBS9   Q16ND4   G3SNQ8   A0A2D0QGS2   Q17AG5   A0A383ZPS6   A0A0P6DDB9   A0A1S3REQ7   A0A0M5J2P4  

PDB

1PZY     E-value=4.17864e-33,     Score=350

KEGG

101738885    K07966 beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-] | (RefSeq) beta-1,4-

PATHWAY

00052    Galactose metabolism - Bombyx mori (domestic silkworm)
00510    N-Glycan biosynthesis - Bombyx mori (domestic silkworm)
00514    Other types of O-glycan biosynthesis - Bombyx mori (domestic silkworm)
00515    Mannose type O-glycan biosynthesis - Bombyx mori (domestic silkworm)
00533    Glycosaminoglycan biosynthesis - keratan sulfate - Bombyx mori (domestic silkworm)
00601    Glycosphingolipid biosynthesis - lacto and neolacto series - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0005975   GO:0016757   GO:0016021   GO:0031526   GO:0006487   GO:0045136   GO:0007341   GO:0008285   GO:0002526   GO:0043065   GO:0003945   GO:0030057   GO:0050900   GO:0060054   GO:0060046   GO:0004461   GO:0005989   GO:0006012   GO:0030145   GO:0009897   GO:0007155   GO:0030198   GO:0003831   GO:0002064   GO:0007339   GO:0000138   GO:0060055   GO:0051260   GO:0016323   GO:0030246   GO:0016831   GO:0004163   GO:0005829   GO:0019287   GO:0005634   GO:0006334   GO:0003779  

PANTHER

PTHR19300  

Length:

224

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.27309

Exp number, first 60 AAs:

0.0004

Total prob of N-in:

0.04197

outside

1  -  224

 

 

Pi

257.265652

Theta

163.195976

Tajima's D

2.887178

CLR

0.414481

CSRT

0.972551372431378

Interpretation

Uncertain