Gene

KWMTBOMO01159

Annotation

reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr3(-):3499093-3500091      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.466

CDS

ATGTCATGGTCCAGACGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTTCTTGTGAATTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCGGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGGTTGCGGCTTGGACACGGCGGAGCACACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCACCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGCGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGAGAGACACGCAAGCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATCTCGCCCAAGCCCTGGCCCTCTAA

Protein

MSWSRRLADPSAGRRTVEAIRPVLVNWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIGAEPTAECHHCGCGLDTAEHTLVACPAWEGWHRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDTQARRRRAGAREADLAQALAL

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

Q5KTM7   Q868Q4   A0A0J7KCI1   A0A0J7KM11   A0A0J7K2M2   A0A2W1BTM2   + More
A0A3L8D4Y9   A0A0J7MZM4   A0A2W1BSQ5   A0A3L8DDS1   A0A0J7KJB9   A0A2W1C3J5   Q8MY27   A0A2H1VM71   A0A2W1B333   A0A3L8DTK4   A0A3L8D2F4   A0A2W1BXC9   A0A2W1BDU5   Q8MY33   Q8MY31   A0A2H1WBD5   A0A0J7KV16   Q8MY35   A0A0J7N1D9   A0A2W1BY04   A0A0J7KS67   A0A0J7KKS4   A0A0J7KIY3   A0A2H1W776   A0A0J7N7H9   O01419   A0A0J7KCQ3   E2BVR6   A0A0J7L0U0   A0A2H1WNZ5   A0A2H1VYR8   A0A0J7KLT9   A0A0J7KIY5   A0A2H1W4U7   A0A3L8DY91   A0A2H1VTA2   A0A0J7JXN3   A0A0J7KIQ5   A0A0J7MZX3   J9KZ24   A0A0J7N7S8   A0A0J7KJH4   A0A0J7KQK3   A0A3L8D6D2   A0A3L8D4Z4   A0A3L8DIL1   A0A2H1VXT5   A0A2H1WEH8   A0A2H1VVH9   A0A3L8D2G3   A0A0J7KT62   A0A2S2P557   A0A0J7KM81   A0A0J7KJG6   A0A0J7KJ07   A0A3L8DXT9   A0A0J7JZF7   A0A0J7JZ13   A0A2S2P2F0   A0A3L8DDV9   J9KRD0   A0A0J7KP02   A0A0J7KPZ3   A0A0J7KJC5   J9LAC1   A0A1W7R645   A0A2H8TIE5   A0A0J7NCZ4   A0A0J7MW86   A0A0J7KYD2   A0A0J7K3R6   A0A0J7KWU5  

Pubmed

12644555    28756777    30249741    9092665    20798317   

EMBL

AB126050    BAD86650.1    AB090825    BAC57926.1    LBMM01009501    KMQ88083.1    + More
LBMM01005707    KMQ91279.1    LBMM01016102    KMQ84557.1    KZ149922    PZC77701.1    QOIP01000014    RLU15083.1    LBMM01012957    LBMM01012956    KMQ85900.1    KMQ85901.1    KZ149950    PZC76665.1    QOIP01000009    RLU18544.1    LBMM01006538    KMQ90523.1    KZ149896    PZC78733.1    AB078935    BAC06462.1    ODYU01003322    SOQ41921.1    KZ150386    PZC71062.1    QOIP01000004    RLU23632.1    QOIP01000060    RLU14687.1    KZ149918    PZC77857.1    KZ150308    PZC71477.1    AB078930    BAC06454.1    AB078931    BAC06456.1    ODYU01007528    SOQ50378.1    LBMM01003001    KMQ94089.1    AB078929    BAC06452.1    LBMM01012027    KMQ86470.1    PZC77700.1    LBMM01003679    KMQ93242.1    LBMM01006022    KMQ91008.1    LBMM01006909    KMQ90209.1    ODYU01006757    SOQ48893.1    LBMM01008861    KMQ88580.1    D85594    BAA19776.1    LBMM01009494    KMQ88097.1    GL450953    EFN80213.1    LBMM01001564    KMQ96079.1    ODYU01009945    SOQ54696.1    ODYU01005282    SOQ45985.1    LBMM01005733    KMQ91252.1    LBMM01006954    KMQ90166.1    ODYU01006342    SOQ48109.1    QOIP01000002    RLU25407.1    ODYU01004308    SOQ44039.1    LBMM01024024    KMQ82631.1    LBMM01006996    KMQ90129.1    LBMM01012797    KMQ85990.1    ABLF02006132    LBMM01008682    KMQ88705.1    LBMM01006657    KMQ90417.1    LBMM01004272    KMQ92618.1    QOIP01000012    RLU16027.1    QOIP01000013    RLU15211.1    QOIP01000007    RLU20280.1    ODYU01005115    SOQ45661.1    ODYU01008140    SOQ51495.1    ODYU01004693    SOQ44845.1    QOIP01000031    RLU14697.1    LBMM01003452    KMQ93523.1    GGMR01011974    MBY24593.1    LBMM01005634    KMQ91349.1    LBMM01006671    KMQ90407.1    LBMM01006662    KMQ90413.1    QOIP01000003    RLU25053.1    LBMM01019838    KMQ83439.1    LBMM01019839    KMQ83438.1    GGMR01010769    MBY23388.1    QOIP01000010    RLU18098.1    ABLF02026677    ABLF02032994    ABLF02059021    ABLF02064578    LBMM01004906    KMQ92001.1    LBMM01004505    KMQ92346.1    LBMM01006534    KMQ90528.1    ABLF02017307    GEHC01001045    JAV46600.1    GFXV01002090    MBW13895.1    LBMM01006640    KMQ90440.1    LBMM01015657    KMQ84725.1    LBMM01002052    KMQ95336.1    LBMM01015018    KMQ84954.1    LBMM01002480    KMQ94776.1   

Proteomes

UP000036403    UP000279307    UP000008237    UP000007819   

PRIDE

Q5KTM7    Q868Q4    O01419   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF00732   GMC_oxred_N
PF00650   CRAL_TRIO

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR002123   Plipid/glycerol_acylTrfase       
IPR036188   FAD/NAD-bd_sf       
IPR012132   GMC_OxRdtase       
IPR000172   GMC_OxRdtase_N       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR012337   RNaseH-like_sf       
IPR001251   CRAL-TRIO_dom       
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR006759   Glyco_transf_54       

SUPFAM

SSF56219   SSF56219        + More
SSF51905   SSF51905       
SSF57756   SSF57756       
SSF53098   SSF53098       
SSF52087   SSF52087       
SSF46938   SSF46938       

Gene 3D

3.60.10.10     3.50.50.60     3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

Q5KTM7   Q868Q4   A0A0J7KCI1   A0A0J7KM11   A0A0J7K2M2   A0A2W1BTM2   + More
A0A3L8D4Y9   A0A0J7MZM4   A0A2W1BSQ5   A0A3L8DDS1   A0A0J7KJB9   A0A2W1C3J5   Q8MY27   A0A2H1VM71   A0A2W1B333   A0A3L8DTK4   A0A3L8D2F4   A0A2W1BXC9   A0A2W1BDU5   Q8MY33   Q8MY31   A0A2H1WBD5   A0A0J7KV16   Q8MY35   A0A0J7N1D9   A0A2W1BY04   A0A0J7KS67   A0A0J7KKS4   A0A0J7KIY3   A0A2H1W776   A0A0J7N7H9   O01419   A0A0J7KCQ3   E2BVR6   A0A0J7L0U0   A0A2H1WNZ5   A0A2H1VYR8   A0A0J7KLT9   A0A0J7KIY5   A0A2H1W4U7   A0A3L8DY91   A0A2H1VTA2   A0A0J7JXN3   A0A0J7KIQ5   A0A0J7MZX3   J9KZ24   A0A0J7N7S8   A0A0J7KJH4   A0A0J7KQK3   A0A3L8D6D2   A0A3L8D4Z4   A0A3L8DIL1   A0A2H1VXT5   A0A2H1WEH8   A0A2H1VVH9   A0A3L8D2G3   A0A0J7KT62   A0A2S2P557   A0A0J7KM81   A0A0J7KJG6   A0A0J7KJ07   A0A3L8DXT9   A0A0J7JZF7   A0A0J7JZ13   A0A2S2P2F0   A0A3L8DDV9   J9KRD0   A0A0J7KP02   A0A0J7KPZ3   A0A0J7KJC5   J9LAC1   A0A1W7R645   A0A2H8TIE5   A0A0J7NCZ4   A0A0J7MW86   A0A0J7KYD2   A0A0J7K3R6   A0A0J7KWU5  

KEGG

100127037    K22984 odorant receptor | (RefSeq) Or-46, BmOr-46, Or46; olfactory receptor 46

GO

GO:0003964   GO:0016746   GO:0016021   GO:0050660   GO:0016614   GO:0008270   GO:0003676  

PANTHER

PTHR12062  

Length:

158

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00566

Exp number, first 60 AAs:

0.00418

Total prob of N-in:

0.14647

outside

1  -  158

 

 

Pi

32.528918

Theta

24.662235

Tajima's D

0.887537

CLR

8.862084

CSRT

0.633468326583671

Interpretation

Uncertain