Gene

KWMTBOMO01156  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007482

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_47_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr3(+):3445392-3454416      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.916 Nuclear   Reliability : 2.446

CDS

ATGCGGATAACATTTCTATTGATTGGATTTCTCTGCGGAATACAGTTTGTTTATGGTTTTGAAGACACTACTCTGGAAGATGATGATTTTGCTGAATTTGAACAGTTTGATGCTGAAGATGATACACCCGTCAATGATTATACAGAAGAAGTACCTGATGTGTTGTCACAAAAAGTGAAACCACCACCTAAAGAATTTGAGGCTGTAGTTGAAATTGAAGACGAAATAATATTAGAGGATGAGGACAATGAATTTGAGCATTTCCAAGACCCTGAGGAGTTTGAAGGGTTCCAGGAAACCACTCCTCGTACAATGGAACAACCAAAGATTACTATTTCTAAGGTTCCTATAACGGCTCGACCTCGCTGGGATGCGTACTGGCTGGAGGGCATACTCTGCTGTCTGCTGGCGTCGTACGCGCTCGCCTATGCCATTGGTCGCGCCAAGAACACGTCTATAGCCGTGAACTTTCTGAAGCTACACAAACCGCTTCTGGAGGAGAATTTCACTCTAGTCGGCGAGACTGGCGCGGAGGTGGTGAGCGGCGCGGACGAGCGCGGCTGGAGGCGCGAGGCGGAGCACTGCTTCACGATGTGGTGCAGCGGCCGCAGCTGCTGCGAGGGCATGCTGCTCACGCTCAAACTCATCAAGCGGCAAGACCTCGTCCACGTGCTGCTGGGCGTGGTGCGGCCCAACCCGGACACGCTGCAGATCCGCATAGAGCTCGGCAAAGACGATATGGATCCCTTCGTGTTCTGTATCGCTCAGAAGAAGATAGCCGCGAAACTCGCCAGGGAAATGCACGATTTGAGCGTGTACTGCGGCGAGCGGCGCGCGGGCGAGCGGCTGGGCGTGCCGGGCGCGCTGAGCGTGGTGGCGGAGTGCGCGGAGCCGGGCGCGGCGCTGCTGGACGCGCGCGTGTGCGCCGCGCTGCAGCTGCACCACCGACACCTGCTCTACCTGCACCTCTCCGACAAGTACGCCGGGCCCAAGCACCTCGAGGAGACGGCATCAACGAAGCCCCCGGAGACGGAGCGCGTGATGCTGGTGAGCCTGGCGCTGGGCCCGGACGGCGGCGGGGACGAGCTCCGCCCGCTGCTGCAGCTCGTCTTCTACATCCTCGACAAGCTCAAGAGGTTCAAGCTCAGCAAAGAGGCGTTGGCTAAGTGCGAGAAGCGTCGTCAGAAGGTGGCGGAGGCCTGGCTCCGGGGGGCGCACGCTGCCAGACAAGAGCAGGCCGCTCTAAGGCGGGAGGAAAAACGGAAACAAGAGAAGGAACGCATACTCGCAGAAGACGACCCAGAGAAACAGCGTCGTTGGGAATTAAAAGAGCAAAAGCGCCAGCAGAAACGAAAAACTCCCAAAATGAAACAATTGAAAGTGAAGGCGCTGTGA

Protein

MRITFLLIGFLCGIQFVYGFEDTTLEDDDFAEFEQFDAEDDTPVNDYTEEVPDVLSQKVKPPPKEFEAVVEIEDEIILEDEDNEFEHFQDPEEFEGFQETTPRTMEQPKITISKVPITARPRWDAYWLEGILCCLLASYALAYAIGRAKNTSIAVNFLKLHKPLLEENFTLVGETGAEVVSGADERGWRREAEHCFTMWCSGRSCCEGMLLTLKLIKRQDLVHVLLGVVRPNPDTLQIRIELGKDDMDPFVFCIAQKKIAAKLAREMHDLSVYCGERRAGERLGVPGALSVVAECAEPGAALLDARVCAALQLHHRHLLYLHLSDKYAGPKHLEETASTKPPETERVMLVSLALGPDGGGDELRPLLQLVFYILDKLKRFKLSKEALAKCEKRRQKVAEAWLRGAHAARQEQAALRREEKRKQEKERILAEDDPEKQRRWELKEQKRQQKRKTPKMKQLKVKAL

Uniprot

H9JD85   A0A2A4JJM2   S4P9X5   A0A1E1WF53   I4DJB7   A0A212F6D0   + More
A0A0N1IGW9   D6WW36   A0A0T6B515   A0A161MJT5   A0A224XPE1   E0VE15   A0A1S3DCT4   T1IG45   A0A1Y1KK89   A0A2P8YQF1   A0A2J7QZZ3   A0A0A9Z0B6   A0A1B6CV99   A0A1B6LS45   A0A1W4XBB0   A0A1B6M0P8   A0A1B6KQV2   A0A1B6L255   A0A195DHY7   A0A2M3Z507   A0A182TKL0   A0A1Y9GL38   A0A2M3Z4Z9   Q7Q124   W5JC68   A0A182PVQ9   A0A2M4BKZ7   A0A2M4BL94   A0A2M4BL58   A0A232FGA8   A0A195BR26   A0A158P1Q6   A0A182K4X5   A0A195EQM7   A0A2M4ACA6   K7ISZ2   A0A182UU19   A0A182KZ59   A0A182X2F8   F4WKD6   A0A182Y683   A0A182W8P8   A0A182F360   A0A182HC10   A0A182GKD9   A0A151XB08   A0A182NP07   A0A182RWP5   A0A182MVL3   A0A195CLJ8   A0A067REC3   A0A023ET13   Q16GK8   A0A182QPZ5   A0A336M334   B0WPF8   A0A2P6LGH5   U5EJN1   A0A1Q3FCF3   A0A0J7NX27   A0A087UE65   A0A084VSN9   E2BJV1   E2AFH6   T1PC37   A0A182JBI0   A0A023GCT3   E9J3X7   A0A0P4WJH0   A0A0L0BZD2   A0A1I8PWG2   A0A0P4X066   T1FXN9   A0A0C9Q3H5   L7MBF0   A0A0M3QTG4   A0A131YXI7   A0A2A3E5T7   A0A224Y2X6   A0A088AEJ8   N6U4G5   W8CB98   A0A1L8D8W3   A0A0L7QLT3   A0A034VDG4   A0A0K8WIY0   A0A1L8DNQ9  

Pubmed

19121390    23622113    22651552    26354079    22118469    18362917    + More
19820115    20566863    28004739    29403074    25401762    26823975    12364791    14747013    17210077    20920257    23761445    28648823    21347285    20075255    20966253    21719571    25244985    26483478    24845553    24945155    17510324    24438588    20798317    25315136    21282665    26108605    23254933    25576852    26830274    28797301    23537049    24495485    25348373   

EMBL

BABH01036256    BABH01036257    NWSH01001348    PCG71592.1    GAIX01003514    JAA89046.1    + More
GDQN01011417    GDQN01005455    JAT79637.1    JAT85599.1    AK401385    KQ459249    BAM18007.1    KPJ02352.1    AGBW02010050    OWR49287.1    KQ460366    KPJ15590.1    KQ971361    EFA08193.1    LJIG01009761    KRT82434.1    GEMB01000814    JAS02326.1    GFTR01006535    JAW09891.1    DS235088    EEB11621.1    ACPB03002684    GEZM01083983    JAV60881.1    PYGN01000432    PSN46487.1    NEVH01009067    PNF34147.1    GBHO01023522    GBHO01004917    GBHO01004914    GBHO01004908    GDHC01001480    JAG20082.1    JAG38687.1    JAG38690.1    JAG38696.1    JAQ17149.1    GEDC01019997    JAS17301.1    GEBQ01013502    JAT26475.1    GEBQ01027601    GEBQ01010479    JAT12376.1    JAT29498.1    GEBQ01029248    GEBQ01026167    JAT10729.1    JAT13810.1    GEBQ01022237    JAT17740.1    KQ980824    KYN12456.1    GGFM01002843    MBW23594.1    APCN01001654    GGFM01002835    MBW23586.1    AAAB01008980    EAA13928.4    ADMH02001597    ETN61917.1    GGFJ01004605    MBW53746.1    GGFJ01004592    MBW53733.1    GGFJ01004593    MBW53734.1    NNAY01000247    OXU29732.1    KQ976419    KYM89338.1    ADTU01006753    KQ982021    KYN30518.1    GGFK01005104    MBW38425.1    AAZX01005553    GL888199    EGI65360.1    JXUM01032625    KQ560961    KXJ80198.1    JXUM01069814    KQ562571    KXJ75576.1    KQ982335    KYQ57478.1    AXCM01000351    KQ977595    KYN01601.1    KK852521    KDR22107.1    GAPW01001163    JAC12435.1    CH478268    EAT33366.1    AXCN02001960    UFQS01000338    UFQT01000338    SSX02972.1    SSX23339.1    DS232023    EDS32337.1    MWRG01000098    PRD37681.1    GANO01002176    JAB57695.1    GFDL01009815    JAV25230.1    LBMM01001078    KMQ96970.1    KK119412    KFM75654.1    ATLV01016119    ATLV01016120    KE525057    KFB40983.1    GL448661    EFN84034.1    GL439108    EFN67869.1    KA646331    AFP60960.1    GBBM01003457    JAC31961.1    GL768069    EFZ12454.1    GDRN01040228    GDRN01040227    JAI67166.1    JRES01001205    KNC24604.1    GDRN01040226    JAI67167.1    AMQM01000618    KB096324    ESO06377.1    GBYB01000366    GBYB01000367    GBYB01008648    JAG70133.1    JAG70134.1    JAG78415.1    GACK01004545    JAA60489.1    CP012523    ALC38839.1    GEDV01004638    JAP83919.1    KZ288358    PBC27065.1    GFPF01000762    MAA11908.1    APGK01039945    APGK01039946    KB740975    KB632186    ENN76485.1    ERL89771.1    GAMC01005026    JAC01530.1    GFDF01011175    JAV02909.1    KQ414906    KOC59582.1    GAKP01018810    JAC40142.1    GDHF01001193    JAI51121.1    GFDF01005995    JAV08089.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000007266    + More
UP000009046    UP000079169    UP000015103    UP000245037    UP000235965    UP000192223    UP000078492    UP000075902    UP000075840    UP000007062    UP000000673    UP000075885    UP000215335    UP000078540    UP000005205    UP000075881    UP000078541    UP000002358    UP000075903    UP000075882    UP000076407    UP000007755    UP000076408    UP000075920    UP000069272    UP000069940    UP000249989    UP000075809    UP000075884    UP000075900    UP000075883    UP000078542    UP000027135    UP000008820    UP000075886    UP000002320    UP000036403    UP000054359    UP000030765    UP000008237    UP000000311    UP000095301    UP000075880    UP000037069    UP000095300    UP000015101    UP000092553    UP000242457    UP000005203    UP000019118    UP000030742    UP000053825   

PRIDE

H9JD85   

Pfam

PF07946   DUF1682        + More
PF03735   ENT

Interpro

IPR012879   DUF1682        + More
IPR036142   ENT_dom-like_sf       
IPR005491   ENT_dom       

SUPFAM

SSF158639   SSF158639       

Gene 3D

1.10.1240.40    

ProteinModelPortal

H9JD85   A0A2A4JJM2   S4P9X5   A0A1E1WF53   I4DJB7   A0A212F6D0   + More
A0A0N1IGW9   D6WW36   A0A0T6B515   A0A161MJT5   A0A224XPE1   E0VE15   A0A1S3DCT4   T1IG45   A0A1Y1KK89   A0A2P8YQF1   A0A2J7QZZ3   A0A0A9Z0B6   A0A1B6CV99   A0A1B6LS45   A0A1W4XBB0   A0A1B6M0P8   A0A1B6KQV2   A0A1B6L255   A0A195DHY7   A0A2M3Z507   A0A182TKL0   A0A1Y9GL38   A0A2M3Z4Z9   Q7Q124   W5JC68   A0A182PVQ9   A0A2M4BKZ7   A0A2M4BL94   A0A2M4BL58   A0A232FGA8   A0A195BR26   A0A158P1Q6   A0A182K4X5   A0A195EQM7   A0A2M4ACA6   K7ISZ2   A0A182UU19   A0A182KZ59   A0A182X2F8   F4WKD6   A0A182Y683   A0A182W8P8   A0A182F360   A0A182HC10   A0A182GKD9   A0A151XB08   A0A182NP07   A0A182RWP5   A0A182MVL3   A0A195CLJ8   A0A067REC3   A0A023ET13   Q16GK8   A0A182QPZ5   A0A336M334   B0WPF8   A0A2P6LGH5   U5EJN1   A0A1Q3FCF3   A0A0J7NX27   A0A087UE65   A0A084VSN9   E2BJV1   E2AFH6   T1PC37   A0A182JBI0   A0A023GCT3   E9J3X7   A0A0P4WJH0   A0A0L0BZD2   A0A1I8PWG2   A0A0P4X066   T1FXN9   A0A0C9Q3H5   L7MBF0   A0A0M3QTG4   A0A131YXI7   A0A2A3E5T7   A0A224Y2X6   A0A088AEJ8   N6U4G5   W8CB98   A0A1L8D8W3   A0A0L7QLT3   A0A034VDG4   A0A0K8WIY0   A0A1L8DNQ9  

KEGG

101738481    no KO assigned | (RefSeq) coiled-coil domain-containing protein 47

GO

GO:0016021   GO:0005509   GO:0005783  

PANTHER

PTHR12883  

SignalP

Position:   1 - 19,         Likelihood:  0.974761

 

 

Length:

464

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.61130999999999

Exp number, first 60 AAs:

1.83909

Total prob of N-in:

0.17437

outside

1  -  464

 

 

Pi

221.608763

Theta

140.34433

Tajima's D

1.140066

CLR

0.148797

CSRT

0.701314934253287

Interpretation

Uncertain