SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01151  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007478
Annotation
PREDICTED:_wiskott-Aldrich_syndrome_protein_family_member_2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.064
 

Sequence

CDS
ATGCGTGCCCCCGCCCCCAGCACCTCCCGCCCCGCCCGCCCCCCGGCGCCTCCAGAGGACCGACCCCGCGCACCCTCTCCGGCTTCTCTGCTGCGTGGCGCCTCCGCCCTCAAGCCGCCACGAGACCAACCAGAACCGCCGCCCGATCCGCGCTCTGATCTACTAAAGGCCATACGTGATGGTATAAAACTGAGGAAAGTGGAGAAGCGGTGCGACGAGACGACGGGTCGGTACGATACGTTGCGGGGCGCGCCGCCGCTACTGGACGTGGCGTCGATACTGGCGCGGCGGGTGGCGGTCGAGCTGAGCGACTCCAGCTCCGGCGAGTCGGACTCCGAGGAGGACTCGGACCAGTGGACGGAGCCTCGGGCGTGA
Protein
MRAPAPSTSRPARPPAPPEDRPRAPSPASLLRGASALKPPRDQPEPPPDPRSDLLKAIRDGIKLRKVEKRCDETTGRYDTLRGAPPLLDVASILARRVAVELSDSSSGESDSEEDSDQWTEPRA

Summary

Pfam
PF02205   WH2
Interpro
IPR028288   SCAR/WAVE_fam        + More
IPR003124   WH2_dom       
PDB
4N78     E-value=0.0133325,     Score=83

Ontologies

Topology

Length:
124
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0008
Exp number, first 60 AAs:
0
Total prob of N-in:
0.26787
outside
1  -  124
 
 

Population Genetic Test Statistics

Pi
265.775015
Theta
181.301891
Tajima's D
1.487529
CLR
0.415927
CSRT
0.781860906954652
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 SFEQQLFSR 100.00 0.007
28556443 GDGGLTELIDDLNSGK 100.00 0.007
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