SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01147  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007460
Annotation
PREDICTED:_serine/threonine-protein_phosphatase_2A_catalytic_subunit_beta_isoform_isoform_X1_[Papilio_polytes]
Full name
Serine/threonine-protein phosphatase      
Location in the cell
Cytoplasmic   Reliability : 4.246
 

Sequence

CDS
ATGGAGGACAAGGCGTCGCTTAAAGAACTAGATCAATGGATACAACAGCTAAATGAATGCAAGCAATTGACAGAAAATCAAGTTAAAACGTTATGTGACAAGGCAAAGGAGATCCTGACGAAGGAATCTAACGTCCAAGAAGTAAAATGTCCGGTGACCGTATGCGGCGACGTGCACGGTCAGTTTCACGACTTGATGGAGCTGTTCCGCATCGGGGGACGTTCTCCGGATACCAACTACCTGTTCATGGGCGACTACGTGGACCGCGGCTACTACAGTGTCGAAACGGTCACATTGCTCGTTGCGCTTAAGGTGCGTTACCGCGAGAGAATAACCATTCTGCGAGGAAATCACGAATCGCGTCAGATTACTCAAGTGTACGGCTTCTACGACGAGTGTCTCCGGAAATACGGCAACGCGTCCGTCTGGAAGCACTTCACCGATCTATTCGATTTCCTGCCCTTGACGGCGCTCGTAGATGGACAGATATTCTGCCTGCACGGTGGACTCAGTCCGTCAATCGACACCCTCGACCACATCAGAGCTCTGGACCGTCTGCAGGAAGTGCCCCACGAAGGACCCATGTGCGATCTCCTCTGGAGTGATCCCGATGACAGAGGTGGATGGGGCATATCTCCCCGTGGAGCCGGCTACACGTTCGGACAGGACATCTCGGAGACGTTCAACCACAGCAACGGGCTCACGCTCGTGTCCCGCGCCCACCAGCTCGTCATGGAGGGGTACAACTGGTGCCACGACAGAAACGTCGTCACTATATTCTCAGCGCCCAACTACTGCTATAGATGTGGTAATCAAGCCGCCATAATGGAATTGGATGATGCACTCAAGTATTCATTCCTGCAGTTCGACCCCGCCCCGCGCCGCGGCGAGCCGCACGTCACGCGGCGGACGCCAGATTACTTCATGTAG
Protein
MEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHSNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDALKYSFLQFDPAPRRGEPHVTRRTPDYFM

Summary

Catalytic Activity
H2O + O-phospho-L-threonyl-[protein] = L-threonyl-[protein] + phosphate
Similarity
Belongs to the PPP phosphatase family.
EC Number
3.1.3.16
EMBL
KZ150100    PZC73519.1    BABH01036247    BABH01036248    BABH01036249    KQ460366    + More
KPJ15580.1    JX398253    KC429039    AFS50168.1    AGI37441.1    GAIX01012056    JAA80504.1    KC558556    AGK93074.1    LBMM01003233    KMQ93778.1    AGBW02009673    OWR50155.1    KF255599    AHF45926.1    GL762091    EFZ22272.1    NEVH01014361    PNF27746.1    KK852699    KDR18186.1    GECU01013127    JAS94579.1    GEBQ01010587    GEBQ01007153    JAT29390.1    JAT32824.1    KQ977133    KYN05485.1    DS235250    EEB13988.1    GFTR01004866    JAW11560.1    KK855891    PTY24279.1    GDKW01002769    JAI53826.1    GECL01002717    JAP03407.1    GBBI01000494    JAC18218.1    GECZ01005775    JAS63994.1    GBYB01012296    JAG82063.1    PYGN01002070    PSN31599.1    QOIP01000008    RLU19844.1    GBGD01002252    JAC86637.1    ACPB03007814    GAHY01000567    JAA76943.1    GBHO01021768    GBRD01010201    GDHC01017013    GDHC01003020    JAG21836.1    JAG55623.1    JAQ01616.1    JAQ15609.1    GFWV01018606    MAA43334.1    GGLE01005514    MBY09640.1    GEFM01003820    JAP71976.1    ABJB010027498    ABJB011093211    ABJB011107534    DS935429    EEC18107.1    NNAY01001328    OXU24343.1    GBBM01001833    JAC33585.1    GFAC01002783    JAT96405.1    GEZM01024972    JAV87663.1    KQ971363    EFA07805.1    KZ288311    PBC28504.1    JR047185    AEY60348.1    KQ761976    OAD56418.1    GFPF01011691    MAA22837.1    GEDV01009419    JAP79138.1    GACK01004607    JAA60427.1    GEFH01002282    JAP66299.1    JARO02000151    KPP79672.1    GFDF01003118    JAV10966.1    APGK01036313    APGK01036314    KB740939    KB631813    ENN77718.1    ERL86376.1    GFDL01016214    JAV18831.1    KQ976460    KYM84751.1    GEDC01017963    GEDC01005069    GEDC01001282    JAS19335.1    JAS32229.1    JAS36016.1    GEDC01028231    GEDC01016801    GEDC01012095    JAS09067.1    JAS20497.1    JAS25203.1    AAMC01051493    BC064168    CR761518    AAH64168.1    CAJ82598.1    GAPW01002797    JAC10801.1    GALA01000987    JAA93865.1    GANO01001215    JAB58656.1    GGFK01001909    MBW35230.1    GGFJ01007685    MBW56826.1    ADMH02000460    ETN66387.1    CH477971    EAT34719.1    ATLV01015102    KE525002    KFB40050.1    AXCP01005389    JH431634    AFYH01018774    AFYH01018775    AFYH01018776    KQ434972    KZC12734.1    CM004471    OCT86303.1    AHAT01021380    GAMD01002196    JAA99394.1    GGFM01001505    MBW22256.1    AXCN02001856    JX052413    AFK10641.1    RJVU01059915    ROJ62421.1    GBXM01004804    JAI03774.1    BX537303    BC044495    BC065680    AAH44495.1    AAH65680.1    JARO02009432    KPP61644.1    GFDL01016216    JAV18829.1    GDAI01000309    JAI17294.1    FP017197    NDHI03003372    PNJ77310.1    BT021727    AAX46574.1    KQ982268    KYQ58462.1    AAAB01008980    EAA13875.4    APCN01005219    GFFV01003631    JAV36314.1    AEFK01014627    AEFK01014628    AEFK01014629    AEFK01014630    AEFK01014631    AEFK01014632    AEFK01014633    AHAT01013380    AHAT01013381    BC042272    AAH42272.1    ABLF02035577    ABLF02035580    DQ416022    AK342594    ABD76369.1    BAH72564.1   
Pfam
PF00149   Metallophos
Interpro
IPR029052   Metallo-depent_PP-like        + More
IPR006186   Ser/Thr-sp_prot-phosphatase       
IPR004843   Calcineurin-like_PHP_ApaH       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR001611   Leu-rich_rpt       
IPR032675   LRR_dom_sf       
Gene 3D
PDB
5W0W     E-value=0,     Score=1652

Ontologies

Topology

Length:
309
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04318
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02489
outside
1  -  309
 
 

Population Genetic Test Statistics

Pi
190.102568
Theta
18.883685
Tajima's D
0.070887
CLR
1.395646
CSRT
0.395530223488826
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 EIDQWIQQINECK 100.00 1e-04
26280517 NVICNFHGMDITTDK 100.00 1e-04
25044914 NVVSAGGSPSAAAPSTASGTIK 100.00 1e-04
24402669 NVSPVPPQTVTR 100.00 1e-04
28467696 NVVSAGGSPSAAAPSTASGTIK 100.00 1e-04
28556443 ELDQWIQQLNECK 100.00 1e-04
28556443 YSFLQFDPAPR 100.00 0.002
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