Gene

KWMTBOMO01145

Pre Gene Modal

BGIBMGA007476

Annotation

PREDICTED:_graves_disease_carrier_protein-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr3(+):3300932-3306770      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.366

CDS

ATGCAGGATACCCTCAGGCTCGGTGGATATTTAAGCGGCCTCCACATACCTCTAGTGCAGCACGGCGATAAGTTCGTGGCGGGCGCCGGCGCAGGAGTGACGGCCGTCACCCTCACGTACCCTTTAGACACAATCCGGGCGAGACTAGCCTTCCAGATCACGGGAGAACACAGATACACTGGTATCGTGCACGCCGCTCTCACCATGTTTCGGAACGAGGGCGGTATGCGAGCTCTGTACCGCGGCTTCGTGCCGACCATGGTGGGGATGGTGCCCTACGCCGGCTTCAGCTTCTACTGCTTCGAGTCCCTCAAGTACGTCTGCATGAAGTACCTACCGACCCAGCTCTGCAGGAAATGCGATCGCAATACCGGCGGGCTGGTGCTGACGGTGCCGGGTAAGCTGGTGTGCGGCGGGCTGGCGGGCGCGGTGGCGCAGTCCGTGTCGTACCCGCTCGACGTCACGCGCCGCCGCATGCAGCTCGCCTGCATGACGCCCGCCACGGAGAAGTTTGGTACGGGCATGTTCCAAACTTTGAGCCTCATATACCGTGAGAACGGTGTGGTGAAAGGCTTGTATAGAGGCATGAGCATCAACTATATACGAGCGATACCGATGGTCGCGACCTCCTTCTCCACCTATGAGCTGATGAAGCAACTCCTACAGCTCGACACTGGTATGAAAGTTTCATAA

Protein

MQDTLRLGGYLSGLHIPLVQHGDKFVAGAGAGVTAVTLTYPLDTIRARLAFQITGEHRYTGIVHAALTMFRNEGGMRALYRGFVPTMVGMVPYAGFSFYCFESLKYVCMKYLPTQLCRKCDRNTGGLVLTVPGKLVCGGLAGAVAQSVSYPLDVTRRRMQLACMTPATEKFGTGMFQTLSLIYRENGVVKGLYRGMSINYIRAIPMVATSFSTYELMKQLLQLDTGMKVS

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

H9JD79   A0A2H1W705   A0A194QA41   A0A336LU13   A0A336MJU8   A0A182JEJ1   + More
A0A2M4AJY7   A0A2M3ZBJ8   A0A182FLJ3   A0A2M4BUB6   W5JBJ3   A0A182JQC1   A0A182WFN3   A0A1Q3FVR1   A0A182RLL9   A0A182P0T4   A0A1Q3FVC3   A0A182Y6X8   A0A182QM20   A0A1S4H6A1   A0A182TLQ8   A0A182LHD0   A0A182HY79   A0A2M4BUE9   A0A182G2Z5   A0A182M820   A0A1Q3FVA2   A0A023ELI1   Q17FT8   A0A182N3F1   A0A0K8TSJ1   A0A1J1IC69   A0A2J7QGQ3   A0A0L7R3H4   A0A067R701   D6WV00   A0A1B6I428   A0A1B0GHF2   A0A1L8E0P7   A0A232F1N7   A0A1B6LWF8   A0A1W4X225   A0A1B6IGM9   A0A1B6G5B1   A0A088A2E7   A0A2A3E9V4   A0A1Y1MVZ6   E0VE38   A0A154PLI7   Q7QHR1   A0A0P4VW42   A0A0A9X7C0   A0A224XGE0   A0A226DFJ1   J3JTJ8   A0A0P5PTI7   A0A023FAF2   A0A0P5MUS9   A0A0N8B7U9   A0A0P5H614   A0A0P5LNN1   A0A0P5VEW2   A0A0P5MA02   A0A162C8N9   A0A310SNB0   A0A0P5APG0   A0A0P6ENZ4   A0A0N8DQF1   A0A0P5X0I1   A0A0P6F618   A0A0P5VN10   E9GFS7   A0A0P5L7N0   A0A0P6I8J2   R4WJS2   J9K0H3   A0A1D2NKA7   E9IAY9   A0A2S2Q4D3   A0A2H8TSH3   A0A0P6DXU8   A0A2P2I6X8   A0A0P5XSZ3   A0A026WUV5   A0A151IL58   A0A0J7MTZ6   A0A2P6KYX3   A0A2P8XHW2   B7Q1D3   A0A2R5LMH9   A0A1Z5KY63   A0A293MAL6   A0A2L2YMH0   V5H9F0   T1IWX9   A0A1L8DY80   E2B686   A0A1E1XC96   A0A1E1XSV0   A0A0K8RLJ4  

Pubmed

19121390    26354079    20920257    23761445    25244985    12364791    + More
20966253    26483478    24945155    17510324    26369729    24845553    18362917    19820115    28648823    28004739    20566863    27129103    25401762    26823975    22516182    23537049    25474469    21292972    23691247    27289101    21282665    24508170    30249741    29403074    28528879    26561354    25765539    20798317    28503490    29209593   

EMBL

BABH01036247    ODYU01006614    SOQ48612.1    KQ459249    KPJ02342.1    UFQT01000196    + More
SSX21536.1    UFQT01001465    SSX30682.1    GGFK01007770    MBW41091.1    GGFM01005132    MBW25883.1    GGFJ01007451    MBW56592.1    ADMH02001969    ETN60134.1    GFDL01003542    JAV31503.1    GFDL01003540    JAV31505.1    AXCN02001110    AAAB01008816    APCN01004504    GGFJ01007430    MBW56571.1    JXUM01040649    KQ561253    KXJ79212.1    AXCM01004355    GFDL01003538    JAV31507.1    GAPW01003511    JAC10087.1    CH477268    EAT45413.1    GDAI01000259    JAI17344.1    CVRI01000047    CRK97148.1    NEVH01014361    PNF27757.1    KQ414663    KOC65378.1    KK852699    KDR18188.1    KQ971357    EFA08338.1    GECU01026056    JAS81650.1    AJWK01004544    AJWK01004545    AJWK01004546    AJWK01004547    AJWK01004548    GFDF01001835    JAV12249.1    NNAY01001328    OXU24347.1    GEBQ01011956    JAT28021.1    GECU01021626    JAS86080.1    GECZ01029979    GECZ01012134    JAS39790.1    JAS57635.1    KZ288311    PBC28505.1    GEZM01022965    GEZM01022964    JAV88635.1    DS235088    EEB11644.1    KQ434972    KZC12735.1    EAA05161.4    GDKW01001696    JAI54899.1    GBHO01028068    GDHC01018803    JAG15536.1    JAP99825.1    GFTR01004881    JAW11545.1    LNIX01000021    OXA43624.1    APGK01050708    BT126555    KB741176    KB631330    KB632210    AEE61519.1    ENN73191.1    ERL84241.1    ERL90132.1    GDIQ01125949    JAL25777.1    GBBI01000251    JAC18461.1    GDIQ01153240    JAK98485.1    GDIQ01204267    GDIQ01095357    GDIQ01067671    GDIQ01050781    GDIQ01047829    JAK47458.1    GDIQ01234766    JAK16959.1    GDIQ01177672    JAK74053.1    GDIP01102757    JAM00958.1    GDIQ01170586    JAK81139.1    LRGB01001348    KZS12832.1    KQ761976    OAD56419.1    GDIP01200845    JAJ22557.1    GDIQ01073521    JAN21216.1    GDIP01011039    JAM92676.1    GDIP01079608    JAM24107.1    GDIQ01093261    GDIQ01052231    JAN42506.1    GDIP01097814    JAM05901.1    GL732542    EFX81691.1    GDIQ01173623    JAK78102.1    GDIQ01009742    JAN84995.1    AK417845    BAN21060.1    ABLF02037162    LJIJ01000021    ODN05545.1    GL762091    EFZ22236.1    GGMS01003376    MBY72579.1    GFXV01004737    MBW16542.1    GDIQ01070671    JAN24066.1    IACF01004165    LAB69759.1    GDIP01068213    JAM35502.1    KK107088    QOIP01000008    EZA59797.1    RLU19523.1    KQ977133    KYN05486.1    LBMM01017768    KMQ83975.1    MWRG01003483    PRD31529.1    PYGN01002070    PSN31598.1    ABJB010065937    ABJB010304493    ABJB010863736    DS837304    EEC12655.1    GGLE01006604    MBY10730.1    GFJQ02007082    JAV99887.1    GFWV01013153    MAA37882.1    IAAA01032902    IAAA01032903    IAAA01032904    IAAA01032905    LAA09312.1    GANP01004563    JAB79905.1    JH431634    GFDF01002869    JAV11215.1    GL445930    EFN88779.1    GFAC01002311    JAT96877.1    GFAA01001070    JAU02365.1    GADI01002404    JAA71404.1   

Proteomes

UP000005204    UP000053268    UP000075880    UP000069272    UP000000673    UP000075881    + More
UP000075920    UP000075900    UP000075885    UP000076408    UP000075886    UP000075902    UP000075882    UP000075840    UP000069940    UP000249989    UP000075883    UP000008820    UP000075884    UP000183832    UP000235965    UP000053825    UP000027135    UP000007266    UP000092461    UP000215335    UP000192223    UP000005203    UP000242457    UP000009046    UP000076502    UP000007062    UP000198287    UP000019118    UP000030742    UP000076858    UP000000305    UP000007819    UP000094527    UP000053097    UP000279307    UP000078542    UP000036403    UP000245037    UP000001555    UP000008237   

PRIDE

H9JD79   

Pfam

PF00153   Mito_carr        + More
PF17827   PrmC_N
PF13847   Methyltransf_31

Interpro

IPR018108   Mitochondrial_sb/sol_carrier        + More
IPR002167   Graves_DC       
IPR023395   Mt_carrier_dom_sf       
IPR002067   Mit_carrier       
IPR019874   Release_fac_Glu-N5_MeTfrase       
IPR040758   PrmC_N       
IPR002052   DNA_methylase_N6_adenine_CS       
IPR029063   SAM-dependent_MTases       
IPR025714   Methyltranfer_dom       
IPR004556   HemK-like       

SUPFAM

SSF103506   SSF103506        + More
SSF53335   SSF53335       

Gene 3D

1.50.40.10    

ProteinModelPortal

H9JD79   A0A2H1W705   A0A194QA41   A0A336LU13   A0A336MJU8   A0A182JEJ1   + More
A0A2M4AJY7   A0A2M3ZBJ8   A0A182FLJ3   A0A2M4BUB6   W5JBJ3   A0A182JQC1   A0A182WFN3   A0A1Q3FVR1   A0A182RLL9   A0A182P0T4   A0A1Q3FVC3   A0A182Y6X8   A0A182QM20   A0A1S4H6A1   A0A182TLQ8   A0A182LHD0   A0A182HY79   A0A2M4BUE9   A0A182G2Z5   A0A182M820   A0A1Q3FVA2   A0A023ELI1   Q17FT8   A0A182N3F1   A0A0K8TSJ1   A0A1J1IC69   A0A2J7QGQ3   A0A0L7R3H4   A0A067R701   D6WV00   A0A1B6I428   A0A1B0GHF2   A0A1L8E0P7   A0A232F1N7   A0A1B6LWF8   A0A1W4X225   A0A1B6IGM9   A0A1B6G5B1   A0A088A2E7   A0A2A3E9V4   A0A1Y1MVZ6   E0VE38   A0A154PLI7   Q7QHR1   A0A0P4VW42   A0A0A9X7C0   A0A224XGE0   A0A226DFJ1   J3JTJ8   A0A0P5PTI7   A0A023FAF2   A0A0P5MUS9   A0A0N8B7U9   A0A0P5H614   A0A0P5LNN1   A0A0P5VEW2   A0A0P5MA02   A0A162C8N9   A0A310SNB0   A0A0P5APG0   A0A0P6ENZ4   A0A0N8DQF1   A0A0P5X0I1   A0A0P6F618   A0A0P5VN10   E9GFS7   A0A0P5L7N0   A0A0P6I8J2   R4WJS2   J9K0H3   A0A1D2NKA7   E9IAY9   A0A2S2Q4D3   A0A2H8TSH3   A0A0P6DXU8   A0A2P2I6X8   A0A0P5XSZ3   A0A026WUV5   A0A151IL58   A0A0J7MTZ6   A0A2P6KYX3   A0A2P8XHW2   B7Q1D3   A0A2R5LMH9   A0A1Z5KY63   A0A293MAL6   A0A2L2YMH0   V5H9F0   T1IWX9   A0A1L8DY80   E2B686   A0A1E1XC96   A0A1E1XSV0   A0A0K8RLJ4  

PDB

4C9H     E-value=2.3867e-10,     Score=154

KEGG

101741572    K15084 solute carrier family 25 (mitochondrial carrier protein), member 16 | (RefSeq) graves disease

GO

GO:0016021   GO:0022857   GO:0005743   GO:0008276   GO:0003676   GO:0006303   GO:0004003   GO:0045901   GO:0045905   GO:0005634   GO:0006334   GO:0003779   GO:0055085  

Length:

230

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

43.01934

Exp number, first 60 AAs:

4.64849

Total prob of N-in:

0.30447

outside

1  -  78

TMhelix

79  -  101

inside

102  -  230

 

 

Pi

184.462144

Theta

146.83787

Tajima's D

0.349634

CLR

0.433253

CSRT

0.471426428678566

Interpretation

Uncertain