Gene

KWMTBOMO01143

Pre Gene Modal

BGIBMGA007462

Annotation

PREDICTED:_sialin_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr3(-):3268394-3290681      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.967

CDS

ATGGACGTGCCGGCAAAGGGAAATGTTCTGGGACGTGTCGTCCCAGCACGCTATGTCCTCGCCGTCCTTGGCTCCATTGGCATGGCCATAGTCTACGGGTTGAAGGTCAATCTGTCGGTGGCGCTAGTGGGGATGCTGAACAAAACAGCGATCAAAATAGCTCTGGGCAATAAGAGTCATGACGAAACTTTATTTAAGAACCTGTCAGTGATACCCGACGATGAGGAATGCCAGCCAACTGGTGGATCTAATAGAAACGCTACGGAATTGGTGGGACCGTTCGTTTGGTCATCCGAAGTGCAGGGAATCGTTTTGAGTTGCTACTTCTGGGGTTATTTCGTCTCCCAAATACCTGGGGCTAGAGTAGCAGAACTTTTCTCGGCGAAATGGGTGATGTTCTTCAGTGTAGCCATCAACGTGGTTTGCACATTGCTCACCCCGGTGATGGCAGAGGCACATTATATTGCCGTTGTAATCATGCGAGTCGGAGAAGGCATAGGTGGGGGAGTAACATTTCCAGCGATGCATGTCTTGTTATCAAAATGGGCGCCTCCAGCTGAACGAAGTGTCATGGCGGCGTTGGTTTACGCGGGAACTTCTCTTGGTACTGTCATTTCTATGTTGATGGCTGGCGTTCTTACTGCTAATGTTGGTTGGGAGAGTGTTTTCTACGTGATGGGTGGTCTGTCGTGCGTCTGGTGTGTGCTTTGGGTGATCTTAGTCCAGGACTCACCCCAGCAACAGCCACTTATCAGCGCGGAAGAGAGAAGCATGATCGTGAGCTCGCTGGGCGGAAAAACTAATGACAAATCCCATAAGAAATTACCTGTACCTTGGAGTAAGGTGCTCAAGTCACCCCCGTTCCTGGCGATCTTAGTGTCGCACGCGTGCTCCAACTGGGGCTGGTACATGTTACTTATCGAGACACCTTTCTATATGGACCAAGTACTCAAGTTCGACATGACCGAGAATGCGGTCATAACTGCTCTCCCGTTCCTTTCCCTGTGGATTTTCAGTATTGCTCTGAGCAGAACCTTAGATTGGCTTCGTTCTAAGAACATTATCACAACTACTACAGCTAGAAAGATTGGCACTCTGTTCGCTTCACTGGTACCGGCAGCCTGTCTACTGGGGCTATGCTACATCGGGTGTAACCGCGCTGGCGCCGTGGTGCTGATGGCCGTGGGCATCACCAGCATCGGCGGAATGTTCTGCGGATTCCTTTCTAATCACATCGACATTGCTCCTAACTTTGCCGGCACCCTGATGGCGATGACAAACACGGTGGCTACCATCCCGGGAATTGTGGTCCCCATTTTTGTTGGAATCCTGACCCACGGGAATCAAACTATTTCGGCTTGGCGTGTCATATTCTTCGTGACAATTGGACTCTACATTATTGAAATTATAGCGTACACTTTATTCGGTTCTGGGGAAGAGCAGTCTTGGAACAAAGTGACAGAAAATAAAGAGGACTTTGAGGTGAAGCCTCTCAAGAACGAAAAGACGCACGTCTAA

Protein

MDVPAKGNVLGRVVPARYVLAVLGSIGMAIVYGLKVNLSVALVGMLNKTAIKIALGNKSHDETLFKNLSVIPDDEECQPTGGSNRNATELVGPFVWSSEVQGIVLSCYFWGYFVSQIPGARVAELFSAKWVMFFSVAINVVCTLLTPVMAEAHYIAVVIMRVGEGIGGGVTFPAMHVLLSKWAPPAERSVMAALVYAGTSLGTVISMLMAGVLTANVGWESVFYVMGGLSCVWCVLWVILVQDSPQQQPLISAEERSMIVSSLGGKTNDKSHKKLPVPWSKVLKSPPFLAILVSHACSNWGWYMLLIETPFYMDQVLKFDMTENAVITALPFLSLWIFSIALSRTLDWLRSKNIITTTTARKIGTLFASLVPAACLLGLCYIGCNRAGAVVLMAVGITSIGGMFCGFLSNHIDIAPNFAGTLMAMTNTVATIPGIVVPIFVGILTHGNQTISAWRVIFFVTIGLYIIEIIAYTLFGSGEEQSWNKVTENKEDFEVKPLKNEKTHV

Uniprot

H9JD65   A0A194QFW7   A0A1S4FWV3   A0A336LH25   A0A212FIW4   A0A182URL5   + More
A0A182L660   Q7Q1S5   A0A182ICS7   A0A084VWB7   Q16LU3   A0A182RGQ2   A0A182QU08   A0A182VTW5   A0A182PKV1   A0A182JFI1   A0A1Q3FRX6   A0A182JNR7   A0A1B0DIM0   A0A182Y8B4   A0A182WZE0   A0A182TN75   A0A182NAX9   A0A182F4D4   A0A1I8QB07   B0WCJ3   A0A182MCR0   A0A182GCT3   A0A0L0CI44   A0A1I8N9U6   A0A1A9UTW9   A0A1B0FMP5   A0A1A9Z5X8   A0A1B0BDS9   V5GWS5   A0A1Q3FRW5   B4KEU3   B4JDF0   W5J4J0   B4LU37   Q29LH5   B4GPY3   A0A0M4EEJ2   A0A1B0CDU0   A0A1A9WUC1   A0A1A9XYT0   B4MZJ1   B3N8C2   B4P311   B3MN94   A0A1W4VYB8   A0A3B0JC14   Q9VPX2   B4ID58   W8BWB5   A0A0J9QTR8   A0A0A1WZ82   A0A034WUJ8   T1DKQ2   A0A088A6U6   A0A154PL53   A0A0L7QLU6   A0A310SFK0   E2AHU1   A0A0N0U7D6   T1PBF5   A0A151IAL0   A0A158NEF3   F4WVK5   A0A195BV40   A0A1Y1NGT2   A0A195FL16   E2BIX9   A0A195EP60   A0A0J7KZ16   A0A0T6AZQ5   A0A2A3E9L3   K7IRU9   E9GHP0   A0A0P5ZVD2   A0A232EHZ9   A0A162D4Z8   A0A0P5QI90   A0A0P4ZW54   A0A0P5KF83   A0A0P6IKX3   A0A0P5G067   A0A0P5GR19   B4KEU4   E9GHN7   E9GKW4   E9GHN9   A0A0K8W7Z8   A0A0P5LAA3   A0A0P4WPA4   A0A0P5YKS6   A0A1J1HJ49   A0A0P6BRB5   A0A0P5KMP1   A0A0T6AUS9  

Pubmed

19121390    26354079    22118469    20966253    12364791    14747013    + More
17210077    24438588    17510324    25244985    26483478    26108605    25315136    17994087    20920257    23761445    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    22936249    25830018    25348373    20798317    21347285    21719571    28004739    20075255    21292972    28648823   

EMBL

BABH01036245    KQ459249    KPJ02341.1    UFQS01003761    UFQT01003761    SSX15915.1    + More
SSX35257.1    AGBW02008325    OWR53660.1    AAAB01008980    EAA13886.3    APCN01005756    ATLV01017545    ATLV01017546    KE525174    KFB42261.1    CH477890    EAT35306.1    AXCN02000652    GFDL01004740    JAV30305.1    AJVK01006146    DS231888    EDS43564.1    AXCM01001829    JXUM01054802    JXUM01054803    KQ561837    KXJ77387.1    JRES01000438    KNC31174.1    CCAG010018215    JXJN01012662    GALX01002289    JAB66177.1    GFDL01004721    JAV30324.1    CH933807    EDW12993.1    CH916368    EDW03320.1    ADMH02002138    ETN58333.1    CH940649    EDW65090.1    CH379060    EAL34070.1    CH479187    EDW39655.1    CP012523    ALC38580.1    AJWK01008230    AJWK01008231    AJWK01008232    AJWK01008233    CH963920    EDW77776.1    CH954177    EDV57309.1    CM000157    EDW87218.1    CH902620    EDV31051.2    OUUW01000004    SPP79917.1    AE014134    AY095062    AAF51413.1    AAM11390.1    CH480829    EDW45484.1    GAMC01000945    JAC05611.1    CM002910    KMY87426.1    GBXI01010507    JAD03785.1    GAKP01001489    JAC57463.1    GAMD01000846    JAB00745.1    KQ434936    KZC12018.1    KQ414905    KOC59597.1    KQ776753    OAD52180.1    GL439579    EFN67020.1    KQ435709    KOX80058.1    KA646096    AFP60725.1    KQ978221    KYM96280.1    ADTU01013276    GL888387    EGI61826.1    KQ976401    KYM92489.1    GEZM01002874    GEZM01002873    GEZM01002872    GEZM01002871    JAV97102.1    KQ981490    KYN41108.1    GL448543    EFN84324.1    KQ978625    KYN29677.1    LBMM01001905    KMQ95571.1    LJIG01022482    KRT80341.1    KZ288312    PBC28415.1    GL732545    EFX81019.1    GDIP01038502    JAM65213.1    NNAY01004388    OXU17964.1    LRGB01002580    KZS06984.1    GDIQ01120286    JAL31440.1    GDIP01207930    JAJ15472.1    GDIQ01190370    GDIQ01190369    GDIQ01108849    GDIQ01065966    JAK61356.1    GDIQ01002786    JAN91951.1    GDIQ01269438    JAJ82286.1    GDIQ01238847    JAK12878.1    EDW12994.1    EFX81022.1    GL732550    EFX79896.1    EFX81020.1    GDHF01005140    JAI47174.1    GDIQ01172818    JAK78907.1    GDRN01074321    JAI63263.1    GDIP01056408    JAM47307.1    CVRI01000001    CRK86494.1    GDIP01012441    JAM91274.1    GDIQ01189412    JAK62313.1    LJIG01022770    KRT78806.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000075903    UP000075882    UP000007062    + More
UP000075840    UP000030765    UP000008820    UP000075900    UP000075886    UP000075920    UP000075885    UP000075880    UP000075881    UP000092462    UP000076408    UP000076407    UP000075902    UP000075884    UP000069272    UP000095300    UP000002320    UP000075883    UP000069940    UP000249989    UP000037069    UP000095301    UP000078200    UP000092444    UP000092445    UP000092460    UP000009192    UP000001070    UP000000673    UP000008792    UP000001819    UP000008744    UP000092553    UP000092461    UP000091820    UP000092443    UP000007798    UP000008711    UP000002282    UP000007801    UP000192221    UP000268350    UP000000803    UP000001292    UP000005203    UP000076502    UP000053825    UP000000311    UP000053105    UP000078542    UP000005205    UP000007755    UP000078540    UP000078541    UP000008237    UP000078492    UP000036403    UP000242457    UP000002358    UP000000305    UP000215335    UP000076858    UP000183832   

PRIDE

H9JD65    Q9VPX2   

Pfam

PF07690   MFS_1        + More
PF09349   OHCU_decarbox

Interpro

IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR018020   OHCU_decarboxylase       
IPR036778   OHCU_decarboxylase_sf       

SUPFAM

SSF103473   SSF103473        + More
SSF158694   SSF158694       

Gene 3D

1.10.3330.10    

CDD

cd06174  MFS

ProteinModelPortal

H9JD65   A0A194QFW7   A0A1S4FWV3   A0A336LH25   A0A212FIW4   A0A182URL5   + More
A0A182L660   Q7Q1S5   A0A182ICS7   A0A084VWB7   Q16LU3   A0A182RGQ2   A0A182QU08   A0A182VTW5   A0A182PKV1   A0A182JFI1   A0A1Q3FRX6   A0A182JNR7   A0A1B0DIM0   A0A182Y8B4   A0A182WZE0   A0A182TN75   A0A182NAX9   A0A182F4D4   A0A1I8QB07   B0WCJ3   A0A182MCR0   A0A182GCT3   A0A0L0CI44   A0A1I8N9U6   A0A1A9UTW9   A0A1B0FMP5   A0A1A9Z5X8   A0A1B0BDS9   V5GWS5   A0A1Q3FRW5   B4KEU3   B4JDF0   W5J4J0   B4LU37   Q29LH5   B4GPY3   A0A0M4EEJ2   A0A1B0CDU0   A0A1A9WUC1   A0A1A9XYT0   B4MZJ1   B3N8C2   B4P311   B3MN94   A0A1W4VYB8   A0A3B0JC14   Q9VPX2   B4ID58   W8BWB5   A0A0J9QTR8   A0A0A1WZ82   A0A034WUJ8   T1DKQ2   A0A088A6U6   A0A154PL53   A0A0L7QLU6   A0A310SFK0   E2AHU1   A0A0N0U7D6   T1PBF5   A0A151IAL0   A0A158NEF3   F4WVK5   A0A195BV40   A0A1Y1NGT2   A0A195FL16   E2BIX9   A0A195EP60   A0A0J7KZ16   A0A0T6AZQ5   A0A2A3E9L3   K7IRU9   E9GHP0   A0A0P5ZVD2   A0A232EHZ9   A0A162D4Z8   A0A0P5QI90   A0A0P4ZW54   A0A0P5KF83   A0A0P6IKX3   A0A0P5G067   A0A0P5GR19   B4KEU4   E9GHN7   E9GKW4   E9GHN9   A0A0K8W7Z8   A0A0P5LAA3   A0A0P4WPA4   A0A0P5YKS6   A0A1J1HJ49   A0A0P6BRB5   A0A0P5KMP1   A0A0T6AUS9  

PDB

6E9O     E-value=4.5873e-08,     Score=139

KEGG

101737684    K08193 MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate c

GO

GO:0016021   GO:0055085   GO:0005886   GO:0005829   GO:0003676   GO:0006303   GO:0004003   GO:0045901   GO:0045905   GO:0005634   GO:0006334   GO:0003779  

Length:

505

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

247.82694

Exp number, first 60 AAs:

22.711

Total prob of N-in:

0.41295

POSSIBLE N-term signal

sequence

outside

1  -  19

TMhelix

20  -  42

inside

43  -  129

TMhelix

130  -  152

outside

153  -  156

TMhelix

157  -  179

inside

180  -  191

TMhelix

192  -  214

outside

215  -  218

TMhelix

219  -  241

inside

242  -  325

TMhelix

326  -  348

outside

349  -  362

TMhelix

363  -  385

inside

386  -  389

TMhelix

390  -  412

outside

413  -  421

TMhelix

422  -  444

inside

445  -  455

TMhelix

456  -  475

outside

476  -  505

 

 

Pi

219.202619

Theta

172.316558

Tajima's D

0.795493

CLR

0.019193

CSRT

0.605719714014299

Interpretation

Uncertain