SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01141
Pre Gene Modal
BGIBMGA007463
Annotation
PREDICTED:_uncharacterized_protein_LOC101741433_[Bombyx_mori]
Location
Bomo_Chr3(-):3246136-3255621      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.327
 

Sequence

CDS
ATGGATAGCACTAGACTGGAGACAGTCCCACCCGGGCCTGTTAATTTGGACACAGTAAGGGCACTTCATCAAACAGTTGTTTCTCTCAGGACAGCGTTAGAAGTTTCCAAGAACGAACTGAAGGATTTGAAACAAAAATATGAACTGCACTCTCAGTGCTTAGAGTATGCTGATGTCATTGAAAAATTGACTTTAGAAAATCATATATTGAGACGAAAAATTATTGATACTGGTGATGAAAAAGATTTTAATCCAAATATAAATTTCCAAGTGACATACAGTCCCAGAACAGATACTGTTGATAGGGATAGTGAAATACTGATCCAAACAACTACAGAAAACTTAGATACTAAAACAAGGATTGAATCTGATATTTGTTGTTCAGAAATTCCAAATACAAAGCTGAGTGAAAATTCTAAGAGAGTAAGTTATTGTTCTATAGAAAGTTCAGATGAGACCCCATTGGAGGTAAAATCTCAAGATCCATCTGAAGCAGATGGTCAAAACACTGATGTAGACATAAGTCGGTCATCAAGTTGTCTTAATCAAGAGAATGAGAAGATCCATCAGCCAAGCTTCAAGACAAAATTAGAATTGCTTTCAAAGTTTGATGTAAGAATAAAAGTTAAAACTGTGAAAGACGGAGAATCATCCAGTACTACTTCAGACACTGATTCAACCTTTACAGACGATAAAAAAAACAAAGATAAGAATAGCAAAGGAAAATTTGAGTTTCAAGAGAAAAAAGAAGACTTTGAAAGAGCAGCTGATCCCAAAAAAAATACCATAAATATTAAATCGGTATCTTCCGATAACATAACAATGGCAGTCCCCAATCCTGAAGGTGATGTGAAGTCCAAGAAAGATAAGTTAGTCCAAGTCAGAATTACTTCAGAAGAGAACCTTATCATTCAGAATATGAAAGATAAAATAGAGCAGGCAAGGAGAAAAGACACACTGAATTTAGATGTGGATGATTTAAGTGTTAGGTCCCTATCAGAGGGAGACAACTCTGTATTCTCAGAAGGGGCAACCACACCAATGGATCCACAAATTAGTAAAGAAGACTATAAACAGGAACATGATGCAAGTGGAAATGAGTCTGAAGAGGTAGATGATATAGAACTCATATTTACAACAGACGAATCTAAGGATATGAGTAATTTGCAGGAGGACCTGGTACCGATACGTGAGACCGATCATTGGACTCCACATTCCAATTCCACGACGCACTCAACACCAGTCCTCATCAAGTTCCACACACTGGATCCTGACTTTCAACCTGGAACTGAAACTACGGACAACAACGATAACGAAAACCAAGAAAACTGTAGCTTACAAAGTGAAATATCAATGTCGAGCTTAAAAATGAAAAGAGTTTCTCTTCCCAGTGACAAGGAAATCAGACATGTCGCCTTTAACAGCAAAGGCAGTCTTGACATACCTGGCCGGAGTATTTTGAAGAGTTGTGACAATAAATCTGATAATACCCTGTACAAGAAAAGCCCGAATACAAGTTCTAAAAAACTGGACAGTATAGACAGTCTCACTTGTGAATACAATAGAGGCCTGAGCTTTGACAACACAAAGAGTTCCAGTTTCGAGCTTGGCTCTAGTATGGATATCCTCCACCGAGATGAGAGTGTGGACAGTTTCTACAAGACCGCTCACCTAGGACATAGGTTTTCGGTGTTTGCCGAAACCGATATATCGAAATGCGGTATTTCAGAAGACGATTTGGCCGTTAATTTGAATGCTAGAAGGAACACATGTCCCAACCCATTTCAATACAGGGTGCCGACACACCGCGGATACAGTCGAGGCGTGACGTCAGGTCCGGTGCGCGCGCGGCCCGTACTGCGTGACGTCACGGCGCCGCGTCGCGATTCCGCCGCGCAGACCGACGTGTCCGCCCTGCCGCCGCGCTGGAGCTCGGACGGATACCTCGCTCATAAGATGTACACGACTTCCGCGGCGGCAGCACCTACACTGCCTCAACGCGGCCTCACGCCGACCTCACGCCGTGGGGCTGCGGAGTCTCGTGTCCCGGCAGTATCGCGACGGTGCTCCGAGGCCAGACGCGTGCTGCTCAGTGACATCGGTTTTACATCGATGGTCCCCGAGTTGTCGCGGTCCGCGGACCCGGTGTGGGCTCTTACGAAGAAGATGTCTAGTATTGAAGAGACTGTAACCAATTCCACGTCTAAATTCCTGTCGCGCGGCTCATCGTACAGGTCGCCGGCTCCCAGCCTGGACCGGAGCCGCGACTGGACGCCGCCGCGGGCCCCGTCCTCTGCGGGGTATCGTCCGTGGCGCAGTTCGTTGCCGGACGTCCGCCGCGACGACACCGAGGAGCTGCTGGAGGAGGCGGAGATATTTTTGAGACGATCCATCGACAACCTCAGACCTTCTTCGCCTGATGTGTCGCGAGCGAGCGAGCCGCGCCCCCCGAGCGGCCGCCCCTACATCCCCGCCGAGCCGCGCGAGCTGCGTCTGGGGCACGCCGTCAAGTTCATCACCCCGCAGGGACGGGTCGCCGTCGGACGCGTCCGGTACGTGGGTATAGCGGGCGGCGCGTCCTCCGTGACGGTGGGGGCGGAGCTCCAGTGCGCGGGGCCTCCGCACAACGACGGCACGGTGCGGGACCGCCGCTACTTCCTGGCGGCGCCGCGACACACCGCCGTCTTCGTGCCCTTCTCGAAGGTCGTCATGGCCTGGGCCAACTAG
Protein
MDSTRLETVPPGPVNLDTVRALHQTVVSLRTALEVSKNELKDLKQKYELHSQCLEYADVIEKLTLENHILRRKIIDTGDEKDFNPNINFQVTYSPRTDTVDRDSEILIQTTTENLDTKTRIESDICCSEIPNTKLSENSKRVSYCSIESSDETPLEVKSQDPSEADGQNTDVDISRSSSCLNQENEKIHQPSFKTKLELLSKFDVRIKVKTVKDGESSSTTSDTDSTFTDDKKNKDKNSKGKFEFQEKKEDFERAADPKKNTINIKSVSSDNITMAVPNPEGDVKSKKDKLVQVRITSEENLIIQNMKDKIEQARRKDTLNLDVDDLSVRSLSEGDNSVFSEGATTPMDPQISKEDYKQEHDASGNESEEVDDIELIFTTDESKDMSNLQEDLVPIRETDHWTPHSNSTTHSTPVLIKFHTLDPDFQPGTETTDNNDNENQENCSLQSEISMSSLKMKRVSLPSDKEIRHVAFNSKGSLDIPGRSILKSCDNKSDNTLYKKSPNTSSKKLDSIDSLTCEYNRGLSFDNTKSSSFELGSSMDILHRDESVDSFYKTAHLGHRFSVFAETDISKCGISEDDLAVNLNARRNTCPNPFQYRVPTHRGYSRGVTSGPVRARPVLRDVTAPRRDSAAQTDVSALPPRWSSDGYLAHKMYTTSAAAAPTLPQRGLTPTSRRGAAESRVPAVSRRCSEARRVLLSDIGFTSMVPELSRSADPVWALTKKMSSIEETVTNSTSKFLSRGSSYRSPAPSLDRSRDWTPPRAPSSAGYRPWRSSLPDVRRDDTEELLEEAEIFLRRSIDNLRPSSPDVSRASEPRPPSGRPYIPAEPRELRLGHAVKFITPQGRVAVGRVRYVGIAGGASSVTVGAELQCAGPPHNDGTVRDRRYFLAAPRHTAVFVPFSKVVMAWAN

Summary

Uniprot
H9JD66   A0A194QA82   A0A0N0PCT2   A0A212FIT8   A0A1S4G806   A0A182GN70   + More
Pubmed
19121390    26354079    22118469    17510324    26483478   
EMBL
BABH01036245    KQ459249    KPJ02339.1    KQ460468    KPJ14585.1    AGBW02008325    + More
OWR53658.1    JXUM01075660    JXUM01075661    KQ562898    KXJ74878.1   
Proteomes
UP000005204    UP000053268    UP000053240    UP000007151    UP000069940    UP000249989    + More
PRIDE
H9JD66   
Pfam
PF01302   CAP_GLY
Interpro
IPR036859   CAP-Gly_dom_sf        + More
IPR000938   CAP-Gly_domain       
SUPFAM
SSF74924   SSF74924       
Gene 3D
2.30.30.190    
ProteinModelPortal
H9JD66   A0A194QA82   A0A0N0PCT2   A0A212FIT8   A0A1S4G806   A0A182GN70   + More

Ontologies

KEGG
101741433    no KO assigned | (RefSeq) uncharacterized LOC101741433
GO

Topology

Length:
908
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04028
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00002
outside
1  -  908
 
 

Population Genetic Test Statistics

Pi
321.74002
Theta
190.80317
Tajima's D
2.115259
CLR
0.072266
CSRT
0.900204989750512
Interpretation
Uncertain
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