SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01140
Pre Gene Modal
BGIBMGA007474
Annotation
putative_secreted_protein_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 1.903 Nuclear   Reliability : 1.847
 

Sequence

CDS
ATGCACACATTAATATTGGCAACGTTAGCGGCGGTGGCAACGGCCATGCCATCGTATATCGCGGTTCCCGCCGACCAGATCGCCTTCTTAGACCTCTCCGCGCTGAGGGTCCGGCGGGTCCCGCGTCAGACCCTCACCCCACCACCACCACCCCCACAGCTGCCCCAGGCACTATACGAACAGGAGTACCAACAAGAGTATCACCCTGTGACCTTGCAGCAGTACCAGCAGCAACAAGTTGCACTGTCCCCTCGGGAACATGAACCAGCGAGACTGGTCCGTCTCCAACCTCAAGACGTCTCGGGAGCAGCTTCTTTGGCCCCGTCTGCACGTTTAGCGGAGAGACCTCCAGATTTTGGCGAATACGTCGACTTTGGCGCGCACACCGGCGACAACGGCGCTTTCGGTTGGTACGCAGACTTCCCGGTCAATAACCACGAAGATTCATCAGGATATAGGAAGTAA
Protein
MHTLILATLAAVATAMPSYIAVPADQIAFLDLSALRVRRVPRQTLTPPPPPPQLPQALYEQEYQQEYHPVTLQQYQQQQVALSPREHEPARLVRLQPQDVSGAASLAPSARLAERPPDFGEYVDFGAHTGDNGAFGWYADFPVNNHEDSSGYRK

Summary

Ontologies

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.943718
 
 
Length:
154
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.80019999999999
Exp number, first 60 AAs:
9.79997
Total prob of N-in:
0.37904
outside
1  -  154
 
 

Population Genetic Test Statistics

Pi
219.282755
Theta
153.916092
Tajima's D
0.922044
CLR
0.20672
CSRT
0.64136793160342
Interpretation
Uncertain
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