Gene

KWMTBOMO01137

Annotation

ku_P80_DNA_helicase_[Danaus_plexippus]

Location

Bomo_Chr3(+):3171982-3174577      View in EpiBrowser

Full name

ATP-dependent DNA helicase II subunit 2       + More
X-ray repair cross-complementing protein 5      

Location in the cell

Nuclear   Reliability : 2.326

CDS

ATGCCTCCTAAAATAGATCAGGGCTTGATAATAATTTTGGATAATGGAAGAAACGTTGCAAATGCCGATGAAAAAGACAAAAAAAGCTTTTATGAGATGGCGCGTGAATGTGCCGCTCGCATTATTGAAACCAAAATTCTCAGTCAAGCTAAGAACAGTTATGTGGGTGTAATTCTGCTCGGATCGAAGAACACGAAGAACAGCGTAGCTGAACAAGCTCCTGGAGAGTTCAAACATATAGAATTGTTATCCGCCCTGCAAACACCTACTTGGCAAATGATTAGGGAACTACCGGAGTCGCCCAGCAAGTCTAAAGGCGATTGGATGGATGCTCTAATTGTAGCAGCTGATCATTTCAAAAATGGTGTCTACGGCGTAAAGATAATTAAAACAAAAATAATTCTTCTAACCAACTTTTGCACTTTAACGAAATATGACCATGATGAAATACAACAGGTCCTGAATGGTTTCAAGGCTGACAACCTAGAAGTCAATGTCATAGGACCTAACCTTTATGATGAAGGACACATCAAAAACAATGACTTTGAACTTGCAAGGCTGTTTGTTGAAGAAACCAAAGGTGTTGCTGAGCCTTTTGGATCGGCAATGAGTTTTTTACTATTTCATCAAAGAAAATCAGTGAATTCTGTTGCTTGGAATTCTGACCTCAGTATAGGTCCGGACTTGAAAATACCCATTTCATCCTACATCAAAATTGATGATAAGCCTGTCGTTGGCAAGTGGACAAAGAAGGTTAAAGATCCTGTGACATCAAAACCAAGTAAAGAGGAAGCAATAAAAAAAGAACGAATATTTTATAATGCAGAGAACCACAGTAAAGTAAAATCAGATTCAAGAACGAAAGGATATCAATATGGGCAACAGATAATACCATTTACTCAAAATGAAGAAACTGAACTCTATGCTTCTGGTGAAAAAGGTTTGACAGTTTATGGTTTCACACATAAAGAGAATATACAGTGGCAGTGCTTGACTGATGTGGGATTAAGTTACATTTTTGGGAGAAAAGGTGATGTTAACGCTCAACAAACTGTCAAATGTTTGGTTGAATGTCTACTTGAACTCAACTTAGTTGGTGTAGCAAGGAGAGTTTGTATCAGTAACTATGCACCAAAAATGTACGCTCTAATACCAAATGTAGACAATGAAAACGGAATATGTTTGTCTATGATACAATTGTGTTACAAAGAAAATATTAAACACATGGTTTTTCCTCCAACAAATTTAAAAAAATATTCCTGCACAGATGCACAAGTTAATGCTTTCAAAGAACTGATTGAAGCCATGGATTTGACTAAAGCTTATGATGATACATATGATGACACTGAAGCATTTCCTATTGGTGAAACAGTGAGTCCTACCGCACAATATATATTAGACTGTATTGCATTTCGAAGTCTGAATCCAGCAGCACCACTACCACCACCAAGAGATGAGATAATGACATTATTCAAAGTACCTCCACTAGTTGAAATGAGATCTCGAGGAGCACTGGAAAAGATTGAAAAGCTATTTCCACTGAATAAAATTGAACCAAGACCGAAAAAGAACAAGCAGCAACAAGAAAGTCCCCAAACCTTAACAGTATTACCAGTTACCAAAAAAGCAGAAAATGAACCATTTGAGATACCTAAGATTTCATTATTCATGGATAAAAATTCAACAGAAACTACTAGTATAGGTACTATGAATCCCATTGATGATTATAAAGCTCTTACAAACAAAGGCAAAAGTTTGTCTGATTTGGCTACAGAAATGACAGAAAGTATACAAAGTTTACTGTATTACAATTTGCACGATGATTCCAAAAAAGCTGTAAATGCCATGAAGTTCTTTAGGAATGAATGCATTAAGTCAGATCCATCAATTTACAATAATTGGCTTCAAAAACTTAAAATATCTCTGAATCACGAAAAAAATACAAAGGTATTGGAAGTCATAAATGAAAATGAGTTGAATGTAATATTAAAGTCTGAAAGCAGTTTGAGTACATATGAGAATGAAGACAGTCAGCTATATGAGAATGACACGATTCCTAACACTTTGCCCGTTGTAATAGATCCTGAAGTGGATGCTTTATTTGATGAAATGTAA

Protein

MPPKIDQGLIIILDNGRNVANADEKDKKSFYEMARECAARIIETKILSQAKNSYVGVILLGSKNTKNSVAEQAPGEFKHIELLSALQTPTWQMIRELPESPSKSKGDWMDALIVAADHFKNGVYGVKIIKTKIILLTNFCTLTKYDHDEIQQVLNGFKADNLEVNVIGPNLYDEGHIKNNDFELARLFVEETKGVAEPFGSAMSFLLFHQRKSVNSVAWNSDLSIGPDLKIPISSYIKIDDKPVVGKWTKKVKDPVTSKPSKEEAIKKERIFYNAENHSKVKSDSRTKGYQYGQQIIPFTQNEETELYASGEKGLTVYGFTHKENIQWQCLTDVGLSYIFGRKGDVNAQQTVKCLVECLLELNLVGVARRVCISNYAPKMYALIPNVDNENGICLSMIQLCYKENIKHMVFPPTNLKKYSCTDAQVNAFKELIEAMDLTKAYDDTYDDTEAFPIGETVSPTAQYILDCIAFRSLNPAAPLPPPRDEIMTLFKVPPLVEMRSRGALEKIEKLFPLNKIEPRPKKNKQQQESPQTLTVLPVTKKAENEPFEIPKISLFMDKNSTETTSIGTMNPIDDYKALTNKGKSLSDLATEMTESIQSLLYYNLHDDSKKAVNAMKFFRNECIKSDPSIYNNWLQKLKISLNHEKNTKVLEVINENELNVILKSESSLSTYENEDSQLYENDTIPNTLPVVIDPEVDALFDEM

Description

Single-stranded DNA-dependent ATP-dependent helicase.

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Similarity

Belongs to the ku80 family.

Feature

chain  X-ray repair cross-complementing protein 5

Uniprot

A0A1E1WBN3   A0A212FFX3   A0A2A4J256   A0A2H1X1Y9   A0A2W1BLE4   A0A194R6E2   + More
A0A194QAF6   A0A0L7LAA1   A0A194QG82   A0A2Z5TTK7   A0A067QUA1   A0A182IRJ5   A0A2J7Q0X8   A0A182RR84   A0A084W8N6   A0A182HRH7   A0A182W904   A0A2J7Q0Z4   A0A182PTE1   A0A182YMS2   A0A182MWT4   A0A1E1XC38   A0A182ULU3   B0WVS5   U5EX40   A0A131Z019   A0A1S4F5C1   A0A224YRX9   A0A182XJJ9   A0A1Q3EZ12   L7M6K0   A0A1E1XLR5   A0A182NAS9   A0A1B6DF39   Q17EU1   A0A1J1IIJ3   A0A023GLM5   W5JNW6   A0A182F1P7   A0A131XFG8   B7PIM4   A0A2P2I4H0   A0A182JTS8   A0A182QXW6   A0A131XXL0   A0A2T7PGD0   A0A1B0CWT2   Q7Q190   A0A2R5LC39   A0A293LCG6   A0A182T995   A0A0Q3Q7U0   T1JB52   A0A182KTK8   K1Q7H0   A0A1B6GA37   A0A210PPZ4   A0A1B6HY89   A0A1B6GYN5   A0A2L2Y2T1   A0A091HIS3   A0A2M4CLY1   F1NZI1   U3IZD5   G3NS32   G3NS20   R7UQ52   A0A0B7AGC9   A0A1V4K5W8   G3MGX4   A0A087THJ1   A0A2M4CLS6   W5MU37   A0A218VB83   A0A0F8AH73   A0A091FKI8   H9GFK3   A0A093I9L5   A0A093Q7N4   A0A091LQK1   A0A091I466   A0A3B4B6W2   G1NGL5   R0J8S9   H2TV03   W5K727   A0A2I0MGE3   A0A182TI16   I3JR98   A0A3P8VTQ7   A0A085MP46   A0A3P8VQN3   A0A3B4B5M3   A0A3L8SPK4   A0A091VD99   W5MU26   A0A1W4ZFY6  

EC Number

3.6.4.12
3.6.4.-

Pubmed

22118469    28756777    26354079    26227816    26760975    24845553    + More
24438588    25244985    28503490    26830274    28797301    25576852    29209593    17510324    20920257    23761445    28049606    12364791    20966253    22992520    28812685    26561354    15592404    23749191    23254933    22216098    25835551    21881562    25463417    20838655    21551351    25329095    23371554    25186727    24487278    24929829    30282656   

EMBL

GDQN01006763    JAT84291.1    AGBW02008752    OWR52632.1    NWSH01004064    PCG65520.1    + More
ODYU01012781    SOQ59258.1    KZ150100    PZC73530.1    KQ460685    KPJ12810.1    KQ459232    KPJ02457.1    JTDY01001972    KOB72423.1    KPJ02456.1    FX985798    BBA93685.1    KK852945    KDR13452.1    NEVH01019960    PNF22250.1    ATLV01021496    KE525319    KFB46580.1    APCN01001706    PNF22251.1    AXCM01000771    GFAC01002419    JAT96769.1    DS232131    EDS35682.1    GANO01000252    JAB59619.1    GEDV01003778    JAP84779.1    GFPF01006205    MAA17351.1    GFDL01014567    JAV20478.1    GACK01005108    JAA59926.1    GFAA01003405    JAU00030.1    GEDC01012999    JAS24299.1    CH477279    EAT45010.1    CVRI01000051    CRK99586.1    GBBM01000669    JAC34749.1    ADMH02000571    ETN65831.1    GEFH01002337    JAP66244.1    ABJB010408228    ABJB010709966    ABJB010895180    DS720013    EEC06446.1    IACF01003296    LAB68918.1    AXCN02000659    GEFM01004047    JAP71749.1    PZQS01000004    PVD32488.1    AJWK01032849    AAAB01008980    EAA14064.4    GGLE01002968    MBY07094.1    GFWV01001662    MAA26392.1    LMAW01001113    KQK84412.1    JH432008    JH816167    EKC32697.1    GECZ01010470    JAS59299.1    NEDP02005563    OWF38542.1    GECU01028111    JAS79595.1    GECZ01002246    JAS67523.1    IAAA01009375    LAA02461.1    KL536906    KFO94722.1    GGFL01002115    MBW66293.1    AADN05000350    ADON01143241    AMQN01001062    KB299137    ELU08335.1    HACG01033199    CEK80064.1    LSYS01004331    OPJ79869.1    JO841125    AEO32742.1    KK115251    KFM64580.1    GGFL01002114    MBW66292.1    AHAT01016452    AHAT01016453    AHAT01016454    AHAT01016455    MUZQ01000015    OWK63199.1    KQ042007    KKF19555.1    KL447081    KFO69669.1    AAWZ02025562    AAWZ02025563    KL215153    KFV63426.1    KL670757    KFW80172.1    KK506111    KFP61416.1    KL218243    KFP03339.1    KB745880    EOA93610.1    AKCR02000014    PKK28727.1    AERX01017609    KL363182    KFD58992.1    QUSF01000012    RLW04856.1    KK733867    KFR00750.1   

Proteomes

UP000007151    UP000218220    UP000053240    UP000053268    UP000037510    UP000027135    + More
UP000075880    UP000235965    UP000075900    UP000030765    UP000075840    UP000075920    UP000075885    UP000076408    UP000075883    UP000075903    UP000002320    UP000076407    UP000075884    UP000008820    UP000183832    UP000000673    UP000069272    UP000001555    UP000075881    UP000075886    UP000245119    UP000092461    UP000007062    UP000075901    UP000051836    UP000075882    UP000005408    UP000242188    UP000000539    UP000016666    UP000007635    UP000014760    UP000190648    UP000054359    UP000018468    UP000197619    UP000053760    UP000001646    UP000053875    UP000053258    UP000054308    UP000261520    UP000001645    UP000005226    UP000018467    UP000053872    UP000075902    UP000005207    UP000265120    UP000276834    UP000053605    UP000192224   

PRIDE

B7PIM4    F1NZI1   

Pfam

PF02735   Ku        + More
PF03731   Ku_N
PF08785   Ku_PK_bind
PF03730   Ku_C
PF00431   CUB
PF03348   Serinc

Interpro

IPR014893   Ku_PK_bind        + More
IPR024193   Ku80       
IPR036494   Ku_C_sf       
IPR036465   vWFA_dom_sf       
IPR005161   Ku_N       
IPR006164   Ku70/Ku80_beta-barrel_dom       
IPR016194   SPOC-like_C_dom_sf       
IPR002035   VWF_A       
IPR005160   Ku_C       
IPR035914   Sperma_CUB_dom_sf       
IPR000859   CUB_dom       
IPR005016   TDE1/TMS       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF53300   SSF53300        + More
SSF100939   SSF100939       
SSF101420   SSF101420       
SSF49854   SSF49854       
SSF57667   SSF57667       

Gene 3D

1.25.40.240     2.40.290.10     3.40.50.410     2.60.120.290    

CDD

cd00873  KU80
cd00041  CUB

ProteinModelPortal

A0A1E1WBN3   A0A212FFX3   A0A2A4J256   A0A2H1X1Y9   A0A2W1BLE4   A0A194R6E2   + More
A0A194QAF6   A0A0L7LAA1   A0A194QG82   A0A2Z5TTK7   A0A067QUA1   A0A182IRJ5   A0A2J7Q0X8   A0A182RR84   A0A084W8N6   A0A182HRH7   A0A182W904   A0A2J7Q0Z4   A0A182PTE1   A0A182YMS2   A0A182MWT4   A0A1E1XC38   A0A182ULU3   B0WVS5   U5EX40   A0A131Z019   A0A1S4F5C1   A0A224YRX9   A0A182XJJ9   A0A1Q3EZ12   L7M6K0   A0A1E1XLR5   A0A182NAS9   A0A1B6DF39   Q17EU1   A0A1J1IIJ3   A0A023GLM5   W5JNW6   A0A182F1P7   A0A131XFG8   B7PIM4   A0A2P2I4H0   A0A182JTS8   A0A182QXW6   A0A131XXL0   A0A2T7PGD0   A0A1B0CWT2   Q7Q190   A0A2R5LC39   A0A293LCG6   A0A182T995   A0A0Q3Q7U0   T1JB52   A0A182KTK8   K1Q7H0   A0A1B6GA37   A0A210PPZ4   A0A1B6HY89   A0A1B6GYN5   A0A2L2Y2T1   A0A091HIS3   A0A2M4CLY1   F1NZI1   U3IZD5   G3NS32   G3NS20   R7UQ52   A0A0B7AGC9   A0A1V4K5W8   G3MGX4   A0A087THJ1   A0A2M4CLS6   W5MU37   A0A218VB83   A0A0F8AH73   A0A091FKI8   H9GFK3   A0A093I9L5   A0A093Q7N4   A0A091LQK1   A0A091I466   A0A3B4B6W2   G1NGL5   R0J8S9   H2TV03   W5K727   A0A2I0MGE3   A0A182TI16   I3JR98   A0A3P8VTQ7   A0A085MP46   A0A3P8VQN3   A0A3B4B5M3   A0A3L8SPK4   A0A091VD99   W5MU26   A0A1W4ZFY6  

PDB

6ERH     E-value=7.02911e-34,     Score=363

KEGG

NA   

GO

GO:0006310   GO:0000723   GO:0003684   GO:0006303   GO:0043564   GO:0016817   GO:0042162   GO:0004386   GO:0003677   GO:0005524   GO:0004003   GO:0016301   GO:0000784   GO:0071480   GO:0071481   GO:0016021   GO:0090734   GO:0044877   GO:0008283   GO:0050769   GO:0005886   GO:0032993   GO:0070419   GO:0048660   GO:1990830   GO:0045860   GO:0051575   GO:0031625   GO:0045027   GO:0044212   GO:0005654   GO:0003723   GO:0008022   GO:0002218   GO:1990904   GO:0060218   GO:0032212   GO:0003691   GO:0045892   GO:0005737   GO:1904430   GO:0042771   GO:0043066   GO:0010212   GO:0006281   GO:0005634   GO:0045901   GO:0045905   GO:0006334   GO:0003779  

Subcellular location

Nucleus  

Length:

704

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00024

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00007

outside

1  -  704

 

 

Pi

273.749964

Theta

234.572207

Tajima's D

0.483822

CLR

0.918906

CSRT

0.512324383780811

Interpretation

Uncertain