Silkworm Genome Informatics Database

Gene

KWMTBOMO01136

Pre Gene Modal

BGIBMGA007465

Annotation

PREDICTED:_2-phosphoxylose_phosphatase_1_[Amyelois_transitella]

Location

Bomo_Chr3(-):3160593-3167671 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.278 Nuclear Reliability : 1.084

CDS

ATGCCGCCTGTACTCACAAATAAAAACAGAATAATGAGTGAAATGATGAAGCTTTCATTTCATCACAGAGCTTTTTATTGTTACCTCGGCATGAGTCTCTGGATTTTTGTTCTCATAACGGTGATGTACAAATACATGTCGGTGAGCGAAGAAATAAGCATACCCAAGAAAATATATAAAGATCAATACATATCAAAAAGTGATGTTAAGTTTAGAAAGATATATATGAGAGCTTGCAATCCAGCTGATAATATAGTGAGAGGTTCAGAAGGTGCAGTAGATGAGGATGCTTGGTTGTTGCATGGTGTGCTCGTGATCACCAGGCATGGAGATAGGGGTCCACTAACACATCTCAAAGGAGGTGATAAATTACCTTGTGATTCGTCAATTGTTTCGCCACTGTTGAAAAGTTACGAAGACTATGTAGCTAACGCAAGCGCGTCAGGTCGGGCGTGGTGGGTGACCTCAACAGGTCCTTTTCACAATTTCCCTTCACTGCCGACTCGGGCGGCCGGGACCAGCTGTGCCCTGGGACAGTTGACGCCAAGGGGACTCCTGCAAATGATAACTGTGGGTAACATTCTGAGGGCAGCGTATGCAGATAAATTAGGATTAGACAATATTGATCCACAGGGAAAAAAGGACACAGGTGTGGCGGTGTCGTACAGCACCCGCTACCGCCGCACGTTCCTGTCGCTTTCGGGGGCGTGGTGGGGGGCGGCGCGGGGCGGGGCGGGGGCGCGGCTGGCTGCCTGTCGGGAGGCGCACAGCGTCTCCTTCTGCTTCAGGGACTGCGCCTGTCCCGCTCATCACGCCATCGACAAAAAAATCAACAATCAAGCAAGGAATCGCTTAGAGTCTCATCCCGCAATCAAAGAGCTGGTCAGCAAGTTATCTAAAGTGTTATTCGAGACGCAAGAACGTACAGACGCGGATGTCGTACGGGATGCCCTTCTTGCCTATATGTGCCACGATGTCCCTTTGCCGTGCACGCACAAAGCCAATCACGAAAAACCAAAACTGACCATAGACAAAAGGCACAGACTACACGAAAGCAAAACAGGAACCAGAAACCTCTTAGATGTCGACATCGACACTTTGAATATGGAACTGGATTATATAAACAATCAGGTGGATTTAAACGGAGACGTGGGTAGGAAAGCCAGAGAAGTCATCGGAAAATACTATGACCTGAAAGATAAGAAAGCGCCCTTAGATTTTGATGCCCAAATGGAGAGGGAGAAGTTGTTGTATTACCAGCAGAGATATTTGGATACCGGCGACACGTACGACGACGTAGTCATAGTGAAGAAGAATTTGGACGCGGATTTTAATTTTCCGAACGACGCTAGAATCGATGCGGACTTCGACGAAGACTACAAGGAGCCGACGCCCGAAACCGAAGACTTCTGCATCAAAAAAGAGCACGTTCTCTCGTTGTTCGCGTACTTGGAGTGGAGCTACCGGCAGGAGATCAAGAATATTCACAATCGGAAACGGGGCTTGCTCGTCTCGTACGGTCTGCTGCACAACATAGTCCAGAACATGATACGCATGATATCGGAGAACAAGCCCAGGTTCGTGATATACTCCGGTCACGATAAGACGTTACAGGCGCTCGTCTTGGCCCTCGGCTTGAGCAATTACCAATATTACAACATACAGTACGCCTCGAGATTGATATTTGAAGTGTACAGGAAGAAGGATCTGCGCGATGAGGTCAAATACGCGAAGAGAAAGGCCGTGGCCCGGGACTTTTACTTCCGGGTCGTCTTCAACGGCGAGGACGTGACGAACAAACTTAGTTTCTGCAACGCGAAACACAATGTCGTTATGAGGGTAGTCGATCCAATAGATGACTTGAAAATTTACAATACATTTTTGTGTCCGATCGAGAGCATCGTAAGGTTTATACACGACGATTATTTTAGTGTTTTTAATGTTAGTAACTTCAAGGATGCGTGCGCCACGGCCGGTAACAAGCGTGGATGA

Protein

MPPVLTNKNRIMSEMMKLSFHHRAFYCYLGMSLWIFVLITVMYKYMSVSEEISIPKKIYKDQYISKSDVKFRKIYMRACNPADNIVRGSEGAVDEDAWLLHGVLVITRHGDRGPLTHLKGGDKLPCDSSIVSPLLKSYEDYVANASASGRAWWVTSTGPFHNFPSLPTRAAGTSCALGQLTPRGLLQMITVGNILRAAYADKLGLDNIDPQGKKDTGVAVSYSTRYRRTFLSLSGAWWGAARGGAGARLAACREAHSVSFCFRDCACPAHHAIDKKINNQARNRLESHPAIKELVSKLSKVLFETQERTDADVVRDALLAYMCHDVPLPCTHKANHEKPKLTIDKRHRLHESKTGTRNLLDVDIDTLNMELDYINNQVDLNGDVGRKAREVIGKYYDLKDKKAPLDFDAQMEREKLLYYQQRYLDTGDTYDDVVIVKKNLDADFNFPNDARIDADFDEDYKEPTPETEDFCIKKEHVLSLFAYLEWSYRQEIKNIHNRKRGLLVSYGLLHNIVQNMIRMISENKPRFVIYSGHDKTLQALVLALGLSNYQYYNIQYASRLIFEVYRKKDLRDEVKYAKRKAVARDFYFRVVFNGEDVTNKLSFCNAKHNVVMRVVDPIDDLKIYNTFLCPIESIVRFIHDDYFSVFNVSNFKDACATAGNKRG

Similarity

Belongs to the histidine acid phosphatase family.

Uniprot

H9JD68 A0A2A4J0X9 A0A2H1WG86 A0A2W1BGZ0 A0A194QBT7 A0A194R5L8 + More
A0A212ELI4 A0A0K8TZN7 A0A034WI02 B4MVT3 Q16K98 Q29MI9 B4G961

Pubmed

19121390 28756777 26354079 22118469 25348373 17994087 + More
17510324 15632085

EMBL

BABH01036234 NWSH01004064 PCG65519.1 ODYU01008464 SOQ52095.1 KZ150100 + More
PZC73531.1 KQ459232 KPJ02455.1 KQ460685 KPJ12809.1 AGBW02014038 OWR42360.1 GDHF01032382 GDHF01014933 JAI19932.1 JAI37381.1 GAKP01005544 JAC53408.1 CH963857 EDW75803.1 CH477971 EAT34717.1 CH379060 EAL33705.1 CH479180 EDW28891.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000053240 UP000007151 UP000007798 + More
UP000008820 UP000001819 UP000008744

PRIDE

H9JD68

Pfam

PF00328 His_Phos_2

Interpro

IPR029033   His_PPase_superfam        + More
IPR033379   Acid_Pase_AS
IPR000560   His_Pase_clade-2

SUPFAM

SSF53254 SSF53254

Gene 3D

3.40.50.1240

CDD

cd07061 HP_HAP_like

ProteinModelPortal

H9JD68 A0A2A4J0X9 A0A2H1WG86 A0A2W1BGZ0 A0A194QBT7 A0A194R5L8 + More
A0A212ELI4 A0A0K8TZN7 A0A034WI02 B4MVT3 Q16K98 Q29MI9 B4G961

KEGG

101737106 K21403 2-phosphoxylose phosphatase [EC:3.1.3.-] | (RefSeq) uncharacterized LOC101737106

GO

GO:0016021 GO:0003993 GO:0045947 GO:0043565 GO:0043022 GO:0045901 GO:0045905 GO:0005634 GO:0006334 GO:0003779

Length:

663

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

21.6553399999999

Exp number, first 60 AAs:

21.57574

Total prob of N-in:

0.99809

POSSIBLE N-term signal

sequence

inside

1 - 20

TMhelix

21 - 43

outside

44 - 663

Pi

231.932764

Theta

133.393697

Tajima's D

-2.422083

CLR

10.436519

CSRT

0.00169991500424979

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics