Gene

KWMTBOMO01134

Pre Gene Modal

BGIBMGA007467

Annotation

PREDICTED:_cyclin-dependent_kinase_5_activator_1_[Bombyx_mori]

Location

Bomo_Chr3(-):3082743-3103916      View in EpiBrowser

Full name

Cyclin-dependent kinase 5 activator      

Location in the cell

Mitochondrial   Reliability : 1.21 Nuclear   Reliability : 1.847

CDS

ATGCGGGGACTTAGCGGCTGCATGCGCGCGGGCCTCATGGGCACCGTGCTGAGCTTCAGTCCGCGCGAGCGGCGACCGCCCGCCGCCGCGCCCCAACCCGATCGCGCCGCCCTCGCCTACTCCTACGAGCGTCTGAACAACGCCAAGAACAGGGAGAACCGCGAGCTGCCGCGGGACGAGCGACGCGCCACTCTCGACGATGCTGCCAAAATCATATCCGAGAAGACGGCCCTCGAAAAGAATCTCAAGAAGCATTCTCTGTTCATAAACGCTTTATCATGGAAGAGGTTCTCGACAGCGAACAATAACAAGAAGAAGCTAGAATCGAAGAGCAAGAGCGTGACGACATTCCGCGCGCCGCTGACGGACAATGCGCCGCTCGATCGCAACAAGAATGTTAGCGTGCAGGGGGGATACCCGCGGCCGGTGCCTGCGCCCCTACCGCCGCCTCCAGCTGAGGTGGTGCGAGCTAACGCACTCAACAACAATGTGTGCTACGCGGAGAAGCTGCCAGCTACGACGGTGGGGCCTGTGGTCGCACCGCGGAAGACCATAATCCAGGCCTCGACCTCAGAGCTGCTCAAATGCCTCGGCACGTTCTTGCATGCGCGGTGCCATCGCTTGCGTGACTTCCAAGCCGGCGACGCGGTCATGTGGCTGCGAACCGTCGATCGCTCTCTGCTTTTACAGGGCTGGCAGGACGTGGCATTCATAAACCCGGCGAACGTCGTGTTCGTGTACATGCTAGTCCGAGAGCTCGTGGACGGAGAAAGGATAGCGCGTCCTCAGGAGCTGCAGGCCGTCGTTCTCACCTGCCTCTACCTCTCTTACTCTTATATGGGCAACGAGATCTCGTACCCCCTCAAGCCGTTCCTAGTTGAAGACTCTAAAGACAAATTCTGGGACCGATGCCTCTTAATCGTCGATCGGCTATCGTTCAACATGCTGAGGATCAATTCGGAGCCGGGTTTCTTCACGGAAGTGTTCACGGAGCTGAAGGCGTGCGGCGTGGTGGACAGCCCTCCTCCCGCACCACCACACCCCGCCCCCGTACCCCCTCACACCGTCACGGCCGCCTGA

Protein

MRGLSGCMRAGLMGTVLSFSPRERRPPAAAPQPDRAALAYSYERLNNAKNRENRELPRDERRATLDDAAKIISEKTALEKNLKKHSLFINALSWKRFSTANNNKKKLESKSKSVTTFRAPLTDNAPLDRNKNVSVQGGYPRPVPAPLPPPPAEVVRANALNNNVCYAEKLPATTVGPVVAPRKTIIQASTSELLKCLGTFLHARCHRLRDFQAGDAVMWLRTVDRSLLLQGWQDVAFINPANVVFVYMLVRELVDGERIARPQELQAVVLTCLYLSYSYMGNEISYPLKPFLVEDSKDKFWDRCLLIVDRLSFNMLRINSEPGFFTEVFTELKACGVVDSPPPAPPHPAPVPPHTVTAA

Subunit

Heterodimer of a catalytic subunit and a regulatory subunit.

Similarity

Belongs to the cyclin-dependent kinase 5 activator family.

Uniprot

A0A2H1WTL2   A0A194QA94   A0A2W1B9Q2   A0A2A4JAT2   D6WWN6   A0A1W4XKY3   + More
A0A1B6L2I7   A0A1Y1KRF3   A0A151J941   A0A3L8DZY4   V9IKL4   A0A088AVN4   A0A158P1T2   A0A2J7RQU1   A0A1B6C3W1   A0A151HZP7   K7IRJ6   N6TBR5   A0A026WPL3   A0A154PI09   A0A1A9ZQV9   B4KJK8   A0A1A9VJA2   A0A1B0BUT3   A0A3B0JLB3   B4G7J4   A0A1B0GAL8   B4MG57   J9K8D0   B3MPQ8   A0A2H8TIC5   A0A2S2PD93   A0A1B6HTQ0   B7P9I4   A0A2P6KIN4   A0A0A1XCR4   A0A0L8HF60   B4HWK3   E9H3I5   A0A210R1W6   A0A1A9YD76   V4ATH6   A0A2T7PBE4   C3ZR40   A0A2C9JLJ6   A0A0B6ZC47   A0A2D0SA81   A0A3B4DK52   A0A3P8S5L9   A0A1S3NGU3   F6SNC8   G3NI28   F1Q6W4   A0A3P8ZR02   A0A3B4YJU0   A0A3B4U772  

Pubmed

26354079    28756777    18362917    19820115    28004739    30249741    + More
21347285    20075255    23537049    24508170    17994087    18057021    25830018    21292972    28812685    23254933    18563158    15562597    20431018    23594743    25069045   

EMBL

ODYU01010904    SOQ56306.1    KQ459232    KPJ02453.1    KZ150241    PZC71908.1    + More
NWSH01002253    PCG68808.1    KQ971361    EFA08111.1    GEBQ01022401    GEBQ01022035    JAT17576.1    JAT17942.1    GEZM01075893    JAV63894.1    KQ979492    KYN21211.1    QOIP01000002    RLU25967.1    JR049103    AEY60859.1    ADTU01006783    NEVH01000618    PNF43187.1    GEDC01029106    JAS08192.1    KQ976675    KYM78229.1    APGK01036344    KB740939    KB632013    ENN77729.1    ERL88023.1    KK107138    EZA57965.1    KQ434923    KZC11479.1    CH933807    EDW13588.2    KRG03888.1    JXJN01020906    JXJN01020907    JXJN01020908    OUUW01000006    SPP81633.1    CH479180    EDW28394.1    CCAG010011279    CH940671    EDW58195.1    ABLF02021288    ABLF02021291    CH902620    EDV32306.1    GFXV01001647    MBW13452.1    GGMR01014790    MBY27409.1    GECU01029675    JAS78031.1    ABJB010127749    ABJB010333436    DS664098    EEC03256.1    MWRG01011051    PRD26171.1    GBXI01005556    JAD08736.1    KQ418303    KOF87888.1    CH480818    EDW52398.1    GL732588    EFX73779.1    NEDP02000857    OWF54881.1    KB201360    ESO97041.1    PZQS01000005    PVD30744.1    GG666664    EEN44913.1    HACG01019304    CEK66169.1    AAMC01124167    KV460639    OCA16249.1    CR391936   

Proteomes

UP000053268    UP000218220    UP000007266    UP000192223    UP000078492    UP000279307    + More
UP000005203    UP000005205    UP000235965    UP000078540    UP000002358    UP000019118    UP000030742    UP000053097    UP000076502    UP000092445    UP000009192    UP000078200    UP000092460    UP000268350    UP000008744    UP000092444    UP000008792    UP000007819    UP000007801    UP000001555    UP000053454    UP000001292    UP000000305    UP000242188    UP000092443    UP000030746    UP000245119    UP000001554    UP000076420    UP000221080    UP000261440    UP000265080    UP000087266    UP000008143    UP000007635    UP000000437    UP000265140    UP000261360    UP000261420   

PRIDE

F1Q6W4   

Pfam

PF03261   CDK5_activator        + More
PF04178   Got1

Interpro

IPR036915   Cyclin-like_sf        + More
IPR004944   CDK5_activator       
IPR007305   Vesicle_transpt_Got1/SFT2       
IPR020846   MFS_dom       

SUPFAM

SSF47954   SSF47954       

CDD

cd06174  MFS

ProteinModelPortal

A0A2H1WTL2   A0A194QA94   A0A2W1B9Q2   A0A2A4JAT2   D6WWN6   A0A1W4XKY3   + More
A0A1B6L2I7   A0A1Y1KRF3   A0A151J941   A0A3L8DZY4   V9IKL4   A0A088AVN4   A0A158P1T2   A0A2J7RQU1   A0A1B6C3W1   A0A151HZP7   K7IRJ6   N6TBR5   A0A026WPL3   A0A154PI09   A0A1A9ZQV9   B4KJK8   A0A1A9VJA2   A0A1B0BUT3   A0A3B0JLB3   B4G7J4   A0A1B0GAL8   B4MG57   J9K8D0   B3MPQ8   A0A2H8TIC5   A0A2S2PD93   A0A1B6HTQ0   B7P9I4   A0A2P6KIN4   A0A0A1XCR4   A0A0L8HF60   B4HWK3   E9H3I5   A0A210R1W6   A0A1A9YD76   V4ATH6   A0A2T7PBE4   C3ZR40   A0A2C9JLJ6   A0A0B6ZC47   A0A2D0SA81   A0A3B4DK52   A0A3P8S5L9   A0A1S3NGU3   F6SNC8   G3NI28   F1Q6W4   A0A3P8ZR02   A0A3B4YJU0   A0A3B4U772  

PDB

1UNL     E-value=1.79893e-57,     Score=563

KEGG

101736976    K11716 cyclin-dependent kinase 5 activator 1 | (RefSeq) cyclin-dependent kinase 5 activator 1

GO

GO:0061575   GO:0016533   GO:0016301   GO:0016192   GO:0016021   GO:0035011   GO:0008045   GO:0008340   GO:0070059   GO:0008344   GO:0030426   GO:0030425   GO:0043025   GO:0010842   GO:0060059   GO:0035881   GO:0060041   GO:0016534   GO:0043565   GO:0043022   GO:0045901   GO:0045905   GO:0005634   GO:0006334   GO:0003779  

Length:

359

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.22016

Exp number, first 60 AAs:

0.00106

Total prob of N-in:

0.01693

outside

1  -  359

 

 

Pi

274.350909

Theta

194.149402

Tajima's D

0.53831

CLR

2.566969

CSRT

0.536973151342433

Interpretation

Uncertain