SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO01116
Pre Gene Modal
BGIBMGA007331
Annotation
PREDICTED:_protein_MCM10_homolog_isoform_X1_[Bombyx_mori]
Full name
Protein MCM10 homolog      
Alternative Name
Sensitized chromosome inheritance modifier 19
Location in the cell
Nuclear   Reliability : 4.496
 

Sequence

CDS
ATGGACGAGAAAGATGAATTATCACAGCTTGAAGAACTGCTCAGTGCTGACTTCGGTGAAAATACTGAAATGAATGCACAAAATAACACCAAAGAAGTAGACATATTTCAGCAAACTACAAACTTAAGAAGTGAAATGCCATCATCAAGTACAGCTGAAGTTCCTTCTATTGTACACAATGGAGATACTGATTCTTCAGACGACGAGGAAAAGCGGGACTATGCAGAAAGGAAGTACAATGATTACGGTTCACAAGTAAAAAAATCATTAGACAAAATTGAACAAGATCAAATTAATCAAAGACTGGATTTTGAGAGTAGATTACGACAAACAAACATGGAAACTAAAGTTTCACGTTATTCCAAATTCACAAAAAAACCTAACATTGAACCTAGAAATGTGTTCAGTCCTCCTAAAGTGAAAAGTAATAAAAATGCAGATGTTTACACAGACCCTATATTCAATATTAGGATTACAAAGCCATTGCTATCTAGTTCAGTTTTGCTAGAGAGAATGCAAGGTAGAGAAGCTATAAGCATGCTTAGAGTAAAAAGGCATGTTGAGAATGAAGACTTGTCAAAAGATTGGGTGATTGCAGGTGTTATTGTTAGGAAAAGTTCAACTAAACAATCTCAGAAAGGAAGTCAGTTTATTATATGGACTCTCAGTGATTTAAAAGATGATATGAAAACGGTTTCTATATTTTTATTTAGGAAAGCCTATAATGAACTATGGAAAACTGCTGAAGGAACAGTTGTTGCAGTTCTTAACCCTAATGTATTAGATAGATCACAGAATAGCGCAGATCAGGCTTGCCTCAGTGTTGATAATCCTGACAGAGTTATGATCATAGGACTCTCCAAAGATTTTGGTATTTGTAAAAGTAAGAAGAAAAATGGGGAACCATGCACAGCCTTTGTCAATATGAATCAATGTCAACACTGCATTTATCATGTAAAACAAGAATACCAAAAGTTTTCACAGAGACAAGAACTACAATCTTCAACCATGGGCAAGGGTTTAGTAAGTTTACAAAATAAAGTTTTAGGAAAAAACACTGTGATCTATGGAGGCAAAGCATATTCAGCCTTACAAAGCGGAAATAACAAAAAGATAAAAGAAAAAGATCAAAACAGACTGATGTCACTCAGTGACTATTACAAAACTGAGGGTGACAAGTTAATCACTAACAAAATGCCTTATGGGGCAGGATTTGTGAAGAACAATAGTGCATTACACAGTCCGACTACACAAAAAACTAGTGATACTGAAAGACTCAGCAAATTGTCCAACTTTAATACACCTACAAACTCAAAACAACTTAGCCTTGCAGAAAAACTGACTAATTCTCCCACATTAGGCAAAGGATTTAGTATAAAAGGCAGTGGAACAATAGACCTAAATATATCATACAAACAAAAGGTAGCTGAAAAAGCAAAATCCAATGCAATCAGAATAATTCAACAGAATGGTGGATTACCAAAATTAGATCCTAATAATTTAAATGGAACTGCTGCTGGGAAAAAAAGAGCTTTAGAAAAATTGAATGGAATGAATGATGAGAATAGCAGTAAAAAAGCAAAATCCAATCATGAACAGAGCAACACTGGGAAAATACTCTCTGAAAGGTTCCGTAAAATATTAGAAGCCACATCAGTACATCAAGACTTAGTAAAACAACATGAAGATGATGAACAAGAGAAGTATTTTAACAAATTAGAGAAAAAGGAAGCAATGGAAGAAAAAATGTTGAGCACATATAAACTTCCATGCAAAGCAGTAAGATGTGCTAAATGTAAATACACTGCATTTTCTGCTGCTCAACGGTGTAAAGATGAAAGACATCCTCTAAAAGTATTAGATACATTTAAGAGGTTCTTTAAATGTTTGGATTGTAAAAATAGAACTGTTTCTTTAGAATTGCTGCCTCTGCATTCTTGTAATAATTGTGGAAGTTCACGGTGGGAGAAAGCTCCAATGTTAAGAGAAAAGAAAATAACGACACTTTCTGATGGTTTATCCATCAGGGGTGAAGAAGAAACATTTTTGGGTGGACAAGTTGCTACTGGCAAAAATATAAATCTATTGGTACCAGACAGCTAA
Protein
MDEKDELSQLEELLSADFGENTEMNAQNNTKEVDIFQQTTNLRSEMPSSSTAEVPSIVHNGDTDSSDDEEKRDYAERKYNDYGSQVKKSLDKIEQDQINQRLDFESRLRQTNMETKVSRYSKFTKKPNIEPRNVFSPPKVKSNKNADVYTDPIFNIRITKPLLSSSVLLERMQGREAISMLRVKRHVENEDLSKDWVIAGVIVRKSSTKQSQKGSQFIIWTLSDLKDDMKTVSIFLFRKAYNELWKTAEGTVVAVLNPNVLDRSQNSADQACLSVDNPDRVMIIGLSKDFGICKSKKKNGEPCTAFVNMNQCQHCIYHVKQEYQKFSQRQELQSSTMGKGLVSLQNKVLGKNTVIYGGKAYSALQSGNNKKIKEKDQNRLMSLSDYYKTEGDKLITNKMPYGAGFVKNNSALHSPTTQKTSDTERLSKLSNFNTPTNSKQLSLAEKLTNSPTLGKGFSIKGSGTIDLNISYKQKVAEKAKSNAIRIIQQNGGLPKLDPNNLNGTAAGKKRALEKLNGMNDENSSKKAKSNHEQSNTGKILSERFRKILEATSVHQDLVKQHEDDEQEKYFNKLEKKEAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKNRTVSLELLPLHSCNNCGSSRWEKAPMLREKKITTLSDGLSIRGEEETFLGGQVATGKNINLLVPDS

Summary

Description
Proposed to be involved in DNA replication and to participate in the activation of the pre-replication complex (pre-RC). May be involved in chromosome condensation.
Subunit
Self-associates. Interacts with Mcm2, dup, Orc2, CDC45L and Su(var)205.
Similarity
Belongs to the MCM10 family.
Keywords
Complete proteome   DNA replication   Metal-binding   Nucleus   Phosphoprotein   Reference proteome   Zinc   Zinc-finger  
Feature
chain  Protein MCM10 homolog
EMBL
JTDY01004465    KOB68124.1    ODYU01006615    SOQ48616.1    KZ150559    PZC70538.1    + More
KQ460468    KPJ14589.1    KQ459249    KPJ02335.1    NWSH01000370    PCG76922.1    AGBW02010127    OWR49119.1    UFQT01000336    SSX23329.1    GFDL01015236    JAV19809.1    DS231817    EDS39679.1    JXUM01160059    KQ573563    KXJ67921.1    DS234473    EDS34138.1    CH477298    EAT44347.1    UFQS01003243    UFQT01003243    SSX15421.1    SSX34790.1    CH964182    EDW80259.1    CH902620    EDV31027.1    CH479184    EDW36815.1    CH379058    EAL34560.1    KRT03652.1    CH480833    EDW46443.1    OUUW01000006    SPP82163.1    BT031323    ABY21736.1    AE014134    AY061477    CH916368    EDW03817.1    GEZM01095141    JAV55487.1    CM000361    CM002910    EDX05719.1    KMY91300.1    CH940649    EDW65059.1    CH933807    EDW13026.1    KK852819    KDR15628.1    ATLV01014596    KE524975    KFB39179.1    JRES01000668    KNC29410.1    CM000158    EDW89951.1    CH954179    EDV54454.1    CCAG010016105    AJWK01012087    QOIP01000008    RLU19688.1    JXJN01002691    CP012523    ALC40113.1    APCN01000664    KQ981272    KYN43855.1    KQ982691    KYQ52215.1    KQ980765    KYN13366.1    GL888063    EGI68445.1    ADTU01006100    KQ976641    KYM78807.1    GL449799    EFN81946.1    GL437061    EFN71191.1    LBMM01006623    KMQ90452.1    KK854016    PTY09412.1    AXCN02000614    CVRI01000054    CRL00638.1    KK107064    EZA60919.1    KQ414855    KOC60109.1    KQ435034    KZC14053.1    NNAY01002185    OXU21855.1    KQ435732    KOX77320.1    KZ288212    PBC32814.1    AAZX01004642    GBYB01011340    JAG81107.1    UFQS01003905    UFQT01003905    SSX16024.1    SSX35357.1    KQ761906    OAD56463.1    ACPB03017551    GAMC01014173    GAMC01014171    JAB92384.1    GBXI01003835    JAD10457.1    GBYB01011341    JAG81108.1    GDHF01030914    JAI21400.1    GAKP01014564    JAC44388.1    GGMS01008385    MBY77588.1    AAZO01003684    DS235321    EEB14658.1    ABLF02025674    GL732533    EFX84989.1    GDIP01221876    JAJ01526.1    GDIP01102388    JAM01327.1    GDIP01038996    LRGB01002384    JAM64719.1    KZS07922.1   
Pfam
PF09329   zf-primase        + More
PF09332   Mcm10
Interpro
IPR040184   Mcm10        + More
IPR015411   Rep_factor_Mcm10_C       
IPR015408   Znf_Mcm10/DnaG       
PDB
3EBE     E-value=9.49538e-38,     Score=396

Ontologies

Topology

Subcellular location
Nucleus  
Length:
700
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00018
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00011
outside
1  -  700
 
 

Population Genetic Test Statistics

Pi
167.90158
Theta
163.329778
Tajima's D
-0.154978
CLR
51.038418
CSRT
0.330633468326584
Interpretation
Uncertain
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