Silkworm Genome Informatics Database

Gene

KWMTBOMO01113

Annotation

PREDICTED:_uncharacterized_protein_LOC106143327_[Amyelois_transitella]

Location

Bomo_Chr3(-):2478677-2486931 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.435

CDS

ATGCAAACGATGTCCGCAACCTTAAACACCGACGCGTATACTGATGTGGTGGAGCTGTGTGCGTTACTACAATGTCTCGGGTTCAGTGTTAAATCTCTCGAGTCTACGGAAGCAAATGTCGGCGAAGACGCCGGAGCGAGGACCATTGTTATTAATTGTCAGTCATCAGGCTTGCACGTGGTGTTGGAAAGTCCCAGTGTATCATGCTCCTGTCCATCCGCCAGCGAACAGAACAGTGGTATATGGCAGGTTTCCGGCGTCACCGGTGGAAAACATCTCGATAAGGAATTCGGATGGTCTCTCCTCGGTTCCTTACCTAAATCGCATCGAGACAGACTTACGAAAGAACTCCTTGATGTAATACGGTATATTAAAGAATACAATGAGACGGACGATAAACGCAGAGAGAAAGAAGCGATAGCCAATCGATCAGCTAGCATGTTGGAACTGACAACTCCTGAGAAATCGCATTTTCAAATTAAATCGGATACGCCGACGAGATGTCGCTCGTTGGATACCTTGACGAAAGTCAGGAAAGATGACCAGCTCCCTGTTCCTCGAACACTCCAGCGATCTCGTCTCAATTCGGAACCCTCCACTGACGACGATAAGGCGGAAATAAGACAACCCATGGCTCAAAGACAAAGTACTTACACGCTATCCTCCACGCCTGGCAGTGCTAGACGACGGAACAAAACATCAAGTCCTCTAAAAGGTCCGCAGAACGACTTATTGGGATCGCTATTGGCCGCAGAGCAAACCGCCGAGGACTTGAGGAGGCAACTAGCGAATGTTATCAAGGAAATCGTAGATGATGCAAAGAATGATTCATCGTTATCTTCGCTGGTATTGGATGTATCTAAAATATCCGTTTTAAAGGTCGCGGAAACATCGAAAGCTCAGTTCGCGTCAAGCCCTAACCTATCGGCGCTTTTGACACAGGAGGACTTCGCTAAGAGCAGACTGAAACGTTACGACAGTGCGTCTACGTCCAACTTACTGCCCGATAAACCGGGAACCAGCAAAGATAAAACATCGCGATTACGTCGCATATCGCCGAACTTTTTTAAAACAAAAAAAGACCCACCAGCCATTAAAATAGATAAAGTCAAAGGACAAGAGAAAAGCAGCAAAATAAACAGTTTATTCAGAGCAAAGGTGGTAGCACCGGTTCGAACTTCGAGATCGAACGCCGAATTTAGCCCCAATCTAAGTTCTGCCTCCAAGAAAAAGTTTAGTCACGTCAAATCAACAATACCAAGACCATCTAAAAAAGAATAA

Protein

MQTMSATLNTDAYTDVVELCALLQCLGFSVKSLESTEANVGEDAGARTIVINCQSSGLHVVLESPSVSCSCPSASEQNSGIWQVSGVTGGKHLDKEFGWSLLGSLPKSHRDRLTKELLDVIRYIKEYNETDDKRREKEAIANRSASMLELTTPEKSHFQIKSDTPTRCRSLDTLTKVRKDDQLPVPRTLQRSRLNSEPSTDDDKAEIRQPMAQRQSTYTLSSTPGSARRRNKTSSPLKGPQNDLLGSLLAAEQTAEDLRRQLANVIKEIVDDAKNDSSLSSLVLDVSKISVLKVAETSKAQFASSPNLSALLTQEDFAKSRLKRYDSASTSNLLPDKPGTSKDKTSRLRRISPNFFKTKKDPPAIKIDKVKGQEKSSKINSLFRAKVVAPVRTSRSNAEFSPNLSSASKKKFSHVKSTIPRPSKKE

Uniprot

A0A2H1V593 A0A2A4JYR3 A0A2W1BQK9 S4PLK6 A0A194QFV8 H9JCT6 + More
A0A0N1PI44 A0A212F8M3

Pubmed

28756777 23622113 26354079 19121390 22118469

EMBL

ODYU01000529 SOQ35444.1 NWSH01000370 PCG76916.1 KZ150074 PZC74003.1 + More
GAIX01003980 JAA88580.1 KQ459249 KPJ02331.1 BABH01027794 KQ460468 KPJ14591.1 AGBW02009710 OWR50059.1

Proteomes

UP000218220 UP000053268 UP000005204 UP000053240 UP000007151

PRIDE

H9JCT6

Pfam

PF00004 AAA + More
PF17862 AAA_lid_3

Interpro

IPR035245   PSMC2        + More
IPR003593   AAA+_ATPase
IPR041569   AAA_lid_3
IPR005937   26S_Psome_P45-like
IPR003959   ATPase_AAA_core
IPR003960   ATPase_AAA_CS
IPR027417   P-loop_NTPase

SUPFAM

SSF52540 SSF52540

ProteinModelPortal

A0A2H1V593 A0A2A4JYR3 A0A2W1BQK9 S4PLK6 A0A194QFV8 H9JCT6 + More
A0A0N1PI44 A0A212F8M3

KEGG

101737572 no KO assigned | (RefSeq) uncharacterized LOC101737572

GO

GO:0008233 GO:0030163 GO:0036402 GO:0005737 GO:0005524

PANTHER

PTHR23073:SF13

Length:

426

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00472

Exp number, first 60 AAs:

0.00472

Total prob of N-in:

0.01489

outside

1 - 426

Pi

353.213676

Theta

197.39248

Tajima's D

2.383384

CLR

0

CSRT

0.933303334833258

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics