Gene

KWMTBOMO01104

Pre Gene Modal

BGIBMGA007430

Annotation

putative_ubiquitin_specific_protease_[Operophtera_brumata]

Location

Bomo_Chr3(+):2256162-2257723      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.074

CDS

ATGAAAACTATTGGAAATGTAATAAATAAATACGATGTAACATTCGTTTTCAATGAAAATAAAGAAGATAATTTTAAATTTATGACTTTTATACCTCAAATTGATGAAGAAACTTGCAAAGAGATCGTAACGCTACCGAAAATAGTTAATATCTGTGCTAATGGCCAAATAGAAAGAAAAAGTATATTTCCATCGAAAAATCCGAAAGATATAAAAAAATGTCCTATTAATGTTGGCATGGGGTCTTTGTACCCTTTTGGAATTATTAATCACAAGGAGAAGTACAAAACGTTTGATCCACTGAACGAAACAGAAGTAAGAGGGTTGGATGTAGATTTAGTCAAAGTTCTAGTAAACCAGTTTAATGGTACATTGAATTTGTATTTCATCTATAAGAAAGAAGAAAATCCTTTTGGGCAATTGGATTTCATTCCTCTTGTACTTAATGGAAGCCTGGACGTCATTGCTGGCGGCTTTTACAGAATTTATGGAAATGTTGTGGCTTATTCCGGAATTTATACCAGTCAAGCCGTTACTTGGATGTATGTTGCAAACAGAACCACAAAATCCTGGCAAAGTCTAATAGTAAAAATAGACGGCTTATACATTTTTGTTATATTCCACCTCATATATAGCTATGTTTGGTACTTTGTGCGAAAATTTGATGAACAGGCAGTGGATTTTAGAAATACCATACTGTACAGTTGGGGAGCTTTGGTCGGCACTACATCGCTACAAGACGCTCTCTCTTTGAAACAGAGAATACTGAATTTAACGTACCTTATTATGTGTGTTCATTTATCAGCATACGTAAGTCTGCATTTATATTACTTCTTGACGGTTTTAGAGCCACCGGAGCTGTTGAAAAGTAATGATGACGTCATGCGATCCGGAAGACCCGCGTTCTTAATACCGATATCCAAATATTTCGTACTCGACGAGAAATACCTAAGTTTTGCTAACGCGTCCGAGGAATGCACGAAATTTCAGGACTGCTCCGACCTATCTCTACTTCGCAACGGCGTAACGATAATACTACAAGGATTCTTTTTGAATTACCAAGCGAGGACAGCTATTAACTATGAAGCTAAAGTACTCAGCGCTGCAGAGAACGTGTTAACTGTTTATTACGAGATGCTGTTGAGGAAGAACAGTCCCTACGTTGAAAGACTTCAGAAGCTGATGACACATTTGTTTGAAGCCGGCATACCAGATAGGTTTTATCGTCACGCTATTGGGTTGACGGTGATTGGGAAAGCTCACAGCGCCTGTCAGAACACAGTTAGCAACAGCTACAGTTGCCAGTCGGGCTGCAAAATAACTTTCGATCAATTCGCCGGAGTGTTTTATCTTTGGCTATTCGGATGTGTCTTGTCTTGTGGCGCTTTTATTTTCGAATTGTTCAGTAAATTCGGAAGGGCATAA

Protein

MKTIGNVINKYDVTFVFNENKEDNFKFMTFIPQIDEETCKEIVTLPKIVNICANGQIERKSIFPSKNPKDIKKCPINVGMGSLYPFGIINHKEKYKTFDPLNETEVRGLDVDLVKVLVNQFNGTLNLYFIYKKEENPFGQLDFIPLVLNGSLDVIAGGFYRIYGNVVAYSGIYTSQAVTWMYVANRTTKSWQSLIVKIDGLYIFVIFHLIYSYVWYFVRKFDEQAVDFRNTILYSWGALVGTTSLQDALSLKQRILNLTYLIMCVHLSAYVSLHLYYFLTVLEPPELLKSNDDVMRSGRPAFLIPISKYFVLDEKYLSFANASEECTKFQDCSDLSLLRNGVTIILQGFFLNYQARTAINYEAKVLSAAENVLTVYYEMLLRKNSPYVERLQKLMTHLFEAGIPDRFYRHAIGLTVIGKAHSACQNTVSNSYSCQSGCKITFDQFAGVFYLWLFGCVLSCGAFIFELFSKFGRA

Uniprot

H9JD33   A0A0L7KX39   A0A2W1BGQ0   A0A0N1PEI9   A0A2H1VPS6   A0A194R4Z7   + More
A0A141W3J3   A0A141W3I4   A0A141W3G4   A0A141W3I8   A0A141W3J8   A0A141W3G9   A0A141W3H5   A0A140G9I3   A0A141W3K3   A0A212ELB3   A0A141W3H0   A0A141W3H9   A0A2P8XYF0   A0A067QXY6   A0A2P8YRK8   A0A2J7PQN4   A0A2J7PQL1   A0A2P8YDT9   A0A2P8ZGM7   D7EIG1   A0A067QL33   A0A067QJR5   A0A2J7Q9U6   T1HNN5   A0A2P8ZEC9   A0A2P8XGP6   J9LZH9   A0A2P8XYD1   A0A2P8Z120   A0A2P8YI71   A0A139W8Y9   A0A067R6W7   A0A336KKK9   A0A2P8XYR0   W5JW20   A0A2S2QMS9   A0A2P8YCF0   A0A2J7RBJ9   A0A2P8XKZ7   A0A2J7PQN8   A0A067RBW1   A0A2P8YDV8   A0A2P8XZE9   A0A2J7QXU2   A0A067QI43   A0A067RJB6   A0A2P8YI73   A0A067QYK3   A0A2J7PFF8   A0A2P8XI69   A0A2J7R371   A0A2J7PFZ6   A0A182PMW1   A0A067RWQ0   A0A067RC22   A0A2J7QT11   A0A084WIG5   A0A2P8XUX9   A0A067R490   A0A182H1I8   A0A1Q1PP69   A0A2J7PYQ2   A0A2P8XRP5   A0A2J7QJK4   A0A2P8ZEU7   A0A2J7RBK6   A0A2P8XZG1   A0A067R4T7   A0A2P8YN99   A0A2P8ZEH8   A0A2J7PZG5   A0A2J7QH68   A0A2J7PWK7   A0A2P8Y3B4   A0A067R8H5   A0A2J7QDG4   A0A3F2ZDG2   A0A2J7QC88   A0A2P8YJ37   A0A2P8YJH1   A0A2P8XTT7   A0A2P8ZA87   A0A2P8Y0F2   A0A2P8ZIG0   A0A2P8YDU3   A0A2P8XPB4   A0A2P8YR81   A0A2P8XPD0   A0A2J7QPS9  

Pubmed

19121390    26227816    28756777    26354079    27004525    22118469    + More
29403074    24845553    18362917    19820115    20920257    23761445    24438588    26483478    28150741   

EMBL

BABH01027764    JTDY01004899    KOB67619.1    KZ150074    PZC73988.1    KQ459072    + More
KPJ03839.1    ODYU01003550    SOQ42462.1    KQ460685    KPJ12878.1    KU756967    AMM70700.1    KU756958    AMM70691.1    KU756938    AMM70671.1    KU756962    AMM70695.1    KU756972    AMM70705.1    KU756943    AMM70676.1    KU756949    AMM70682.1    KU702635    AMM70662.1    KU756977    AMM70710.1    AGBW02014103    OWR42257.1    KU756944    AMM70677.1    KU756953    AMM70686.1    PYGN01001167    PSN37025.1    KK853123    KDR11041.1    PYGN01000408    PSN46889.1    NEVH01022635    PNF18649.1    PNF18624.1    PYGN01000674    PSN42422.1    PYGN01000063    PSN55655.1    DS497678    EFA11918.1    KK853197    KDR09956.1    KK853275    KDR09085.1    NEVH01016344    PNF25358.1    ACPB03001833    PYGN01000081    PSN54862.1    PYGN01002203    PSN31178.1    ABLF02041229    PSN37021.1    PYGN01000247    PSN50195.1    PYGN01000578    PSN43951.1    KQ972879    KXZ75746.1    KK852902    KDR14037.1    UFQS01000221    UFQT01000221    SSX01560.1    SSX21940.1    PYGN01001151    PSN37148.1    ADMH02000120    ETN67703.1    GGMS01009876    MBY79079.1    PYGN01000706    PSN41928.1    NEVH01005895    PNF38217.1    PYGN01001824    PSN32652.1    PNF18650.1    KK852566    KDR21232.1    PSN42426.1    PYGN01001126    PSN37378.1    NEVH01009372    PNF33402.1    KK853359    KDR08169.1    KK852437    KDR23912.1    PSN43950.1    KK852871    KDR14577.1    NEVH01025660    PNF15065.1    PYGN01002051    PSN31682.1    NEVH01007822    PNF35288.1    NEVH01025635    PNF15248.1    KK852417    KDR24339.1    KK852744    KDR17342.1    NEVH01011202    PNF31732.1    ATLV01023931    KE525347    KFB50009.1    PYGN01001306    PSN35821.1    KDR14038.1    JXUM01023173    KQ560653    KXJ81430.1    KY325458    AQM73619.1    NEVH01020342    PNF21465.1    PYGN01001465    PSN34682.1    NEVH01013553    PNF28758.1    PYGN01000077    PSN55016.1    PNF38215.1    PSN37383.1    KK852749    KDR17222.1    PYGN01000473    PSN45721.1    PSN54860.1    NEVH01020335    PNF21729.1    NEVH01014356    PNF27931.1    NEVH01020889    PNF20710.1    PYGN01000978    PSN38746.1    PSN38753.1    KK852669    KDR18856.1    NEVH01015822    PNF26625.1    AJWK01002246    NEVH01016291    PNF26182.1    PYGN01000561    PSN44214.1    PYGN01000552    PSN44386.1    PYGN01001360    PSN35409.1    PYGN01000127    PSN53423.1    PYGN01001086    PSN37735.1    PYGN01000048    PSN56284.1    PSN42427.1    PYGN01001589    PSN33849.1    PYGN01000417    PSN46760.1    PSN33850.1    NEVH01012087    PNF30598.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000007151    UP000245037    + More
UP000027135    UP000235965    UP000007266    UP000015103    UP000007819    UP000000673    UP000075885    UP000030765    UP000069940    UP000249989    UP000092461   

PRIDE

H9JD33   

Pfam

PF00060   Lig_chan        + More
PF10613   Lig_chan-Glu_bd
PF00497   SBP_bac_3
PF10179   DUF2369

Interpro

IPR001320   Iontro_rcpt        + More
IPR019594   Glu/Gly-bd       
IPR001638   Solute-binding_3/MltF_N       
IPR001508   Iono_rcpt_met       
IPR003961   FN3_dom       
IPR019326   NDNF       
IPR018313   SBP_3_CS       

CDD

cd00063  FN3

ProteinModelPortal

H9JD33   A0A0L7KX39   A0A2W1BGQ0   A0A0N1PEI9   A0A2H1VPS6   A0A194R4Z7   + More
A0A141W3J3   A0A141W3I4   A0A141W3G4   A0A141W3I8   A0A141W3J8   A0A141W3G9   A0A141W3H5   A0A140G9I3   A0A141W3K3   A0A212ELB3   A0A141W3H0   A0A141W3H9   A0A2P8XYF0   A0A067QXY6   A0A2P8YRK8   A0A2J7PQN4   A0A2J7PQL1   A0A2P8YDT9   A0A2P8ZGM7   D7EIG1   A0A067QL33   A0A067QJR5   A0A2J7Q9U6   T1HNN5   A0A2P8ZEC9   A0A2P8XGP6   J9LZH9   A0A2P8XYD1   A0A2P8Z120   A0A2P8YI71   A0A139W8Y9   A0A067R6W7   A0A336KKK9   A0A2P8XYR0   W5JW20   A0A2S2QMS9   A0A2P8YCF0   A0A2J7RBJ9   A0A2P8XKZ7   A0A2J7PQN8   A0A067RBW1   A0A2P8YDV8   A0A2P8XZE9   A0A2J7QXU2   A0A067QI43   A0A067RJB6   A0A2P8YI73   A0A067QYK3   A0A2J7PFF8   A0A2P8XI69   A0A2J7R371   A0A2J7PFZ6   A0A182PMW1   A0A067RWQ0   A0A067RC22   A0A2J7QT11   A0A084WIG5   A0A2P8XUX9   A0A067R490   A0A182H1I8   A0A1Q1PP69   A0A2J7PYQ2   A0A2P8XRP5   A0A2J7QJK4   A0A2P8ZEU7   A0A2J7RBK6   A0A2P8XZG1   A0A067R4T7   A0A2P8YN99   A0A2P8ZEH8   A0A2J7PZG5   A0A2J7QH68   A0A2J7PWK7   A0A2P8Y3B4   A0A067R8H5   A0A2J7QDG4   A0A3F2ZDG2   A0A2J7QC88   A0A2P8YJ37   A0A2P8YJH1   A0A2P8XTT7   A0A2P8ZA87   A0A2P8Y0F2   A0A2P8ZIG0   A0A2P8YDU3   A0A2P8XPB4   A0A2P8YR81   A0A2P8XPD0   A0A2J7QPS9  

KEGG

NA   

GO

GO:0016021   GO:0004970   GO:0008233   GO:0050804   GO:0035249   GO:0005886   GO:0045211   GO:1904315   GO:0008066   GO:0016020   GO:0006825   GO:0016531   GO:0000786   GO:0003677   GO:0005634   GO:0006334   GO:0003779  

Length:

474

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

95.5017500000002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.90380

inside

1  -  161

TMhelix

162  -  184

outside

185  -  193

TMhelix

194  -  216

inside

217  -  255

TMhelix

256  -  278

outside

279  -  445

TMhelix

446  -  468

inside

469  -  474

 

 

Pi

249.115855

Theta

221.264705

Tajima's D

0.385236

CLR

0.129029

CSRT

0.47957602119894

Interpretation

Uncertain